RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 ARL14EPQ8N8R7 260 aaPredicted RBP14.71□□□□□ -0.05
VIPAS39-208ENST00000556412 ZSCAN18Q8TBC5 510 aaPredicted RBP14.71□□□□□ -0.05
VIPAS39-208ENST00000556412 SELENOOQ9BVL4 669 aa14.71□□□□□ -0.05
VIPAS39-208ENST00000556412 PHF7Q9BWX1 381 aaPredicted RBP14.71□□□□□ -0.05
VIPAS39-208ENST00000556412 SLC46A2Q9BY10 475 aa14.71□□□□□ -0.05
VIPAS39-208ENST00000556412 METTL5Q9NRN9 209 aaKnown RBP14.71□□□□□ -0.05
VIPAS39-208ENST00000556412 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.71□□□□□ -0.05
VIPAS39-208ENST00000556412 MDM4O15151 490 aa14.71□□□□□ -0.06
VIPAS39-208ENST00000556412 COCHO43405 550 aa14.71□□□□□ -0.06
VIPAS39-208ENST00000556412 IPO7O95373 1038 aaKnown RBP14.71□□□□□ -0.06
VIPAS39-208ENST00000556412 YWHAZP63104 245 aaKnown RBP14.71□□□□□ -0.06
VIPAS39-208ENST00000556412 ZNF268Q14587 947 aaPredicted RBP14.71□□□□□ -0.06
VIPAS39-208ENST00000556412 SPA17Q15506 151 aa14.71□□□□□ -0.06
VIPAS39-208ENST00000556412 MIB1Q86YT6 1006 aa14.71□□□□□ -0.06
VIPAS39-208ENST00000556412 CCDC170Q8IYT3 715 aa14.71□□□□□ -0.06
VIPAS39-208ENST00000556412 TDRD5Q8NAT2 981 aaKnown RBP14.71□□□□□ -0.06
VIPAS39-208ENST00000556412 ACSF2Q96CM8 615 aaPredicted RBP14.71□□□□□ -0.06
VIPAS39-208ENST00000556412 TRIM11Q96F44 468 aa14.71□□□□□ -0.06
VIPAS39-208ENST00000556412 SLC22A12Q96S37 553 aa14.71□□□□□ -0.06
VIPAS39-208ENST00000556412 ISCUQ9H1K1 167 aa14.71□□□□□ -0.06
VIPAS39-208ENST00000556412 POPDC2Q9HBU9 364 aa14.71□□□□□ -0.06
VIPAS39-208ENST00000556412 ABCC13Q9NSE7 274 aa14.71□□□□□ -0.06
VIPAS39-208ENST00000556412 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.71□□□□□ -0.06
VIPAS39-208ENST00000556412 SMPD4Q9NXE4 827 aa14.71□□□□□ -0.06
VIPAS39-208ENST00000556412 CLIC5Q9NZA1 410 aa14.71□□□□□ -0.06
VIPAS39-208ENST00000556412 WDR35Q9P2L0 1181 aa14.71□□□□□ -0.06
VIPAS39-208ENST00000556412 CNOT8Q9UFF9 292 aaKnown RBP14.71□□□□□ -0.06
VIPAS39-208ENST00000556412 RASAL2Q9UJF2 1139 aa14.71□□□□□ -0.06
VIPAS39-208ENST00000556412 NAALADL1Q9UQQ1 740 aa14.71□□□□□ -0.06
VIPAS39-208ENST00000556412 HSF2BPO75031 334 aa14.7□□□□□ -0.06
VIPAS39-208ENST00000556412 MBL2P11226 248 aaPredicted RBP14.7□□□□□ -0.06
VIPAS39-208ENST00000556412 FECHP22830 423 aa14.7□□□□□ -0.06
VIPAS39-208ENST00000556412 DDX6P26196 483 aaKnown RBP eCLIP14.7□□□□□ -0.06
VIPAS39-208ENST00000556412 EFEMP1Q12805 493 aa14.7□□□□□ -0.06
VIPAS39-208ENST00000556412 SNX30Q5VWJ9 437 aa14.7□□□□□ -0.06
VIPAS39-208ENST00000556412 RAD9BQ6WBX8 426 aa14.7□□□□□ -0.06
VIPAS39-208ENST00000556412 SLC26A9Q7LBE3 791 aa14.7□□□□□ -0.06
VIPAS39-208ENST00000556412 TADA2BQ86TJ2 420 aa14.7□□□□□ -0.06
VIPAS39-208ENST00000556412 TMEM139Q8IV31 216 aa14.7□□□□□ -0.06
VIPAS39-208ENST00000556412 LRRC8AQ8IWT6 810 aa14.7□□□□□ -0.06
VIPAS39-208ENST00000556412 CMTM8Q8IZV2 173 aa14.7□□□□□ -0.06
VIPAS39-208ENST00000556412 TRIM62Q9BVG3 475 aa14.7□□□□□ -0.06
VIPAS39-208ENST00000556412 PACSIN1Q9BY11 444 aa14.7□□□□□ -0.06
VIPAS39-208ENST00000556412 RNF38Q9H0F5 515 aa14.7□□□□□ -0.06
VIPAS39-208ENST00000556412 THAP2Q9H0W7 228 aa14.7□□□□□ -0.06
VIPAS39-208ENST00000556412 GDE1Q9NZC3 331 aa14.7□□□□□ -0.06
VIPAS39-208ENST00000556412 C2CD4DB7Z1M9 353 aa14.69□□□□□ -0.06
VIPAS39-208ENST00000556412 NRDCO43847 1150 aa14.69□□□□□ -0.06
VIPAS39-208ENST00000556412 NDUFA10O95299 355 aa14.69□□□□□ -0.06
VIPAS39-208ENST00000556412 OAS1P00973 400 aaKnown RBP14.69□□□□□ -0.06
VIPAS39-208ENST00000556412 KRT3P12035 628 aa14.69□□□□□ -0.06
VIPAS39-208ENST00000556412 ATP5C1P36542 298 aaKnown RBP14.69□□□□□ -0.06
VIPAS39-208ENST00000556412 GALCP54803 685 aa14.69□□□□□ -0.06
VIPAS39-208ENST00000556412 DCAF6Q58WW2 860 aa14.69□□□□□ -0.06
VIPAS39-208ENST00000556412 FAM78AQ5JUQ0 283 aa14.69□□□□□ -0.06
VIPAS39-208ENST00000556412 POTEHQ6S545 545 aa14.69□□□□□ -0.06
VIPAS39-208ENST00000556412 DEFB106AQ8N104 65 aa14.69□□□□□ -0.06
VIPAS39-208ENST00000556412 EMC1Q8N766 993 aa14.69□□□□□ -0.06
VIPAS39-208ENST00000556412 C3orf20Q8ND61 904 aa14.69□□□□□ -0.06
VIPAS39-208ENST00000556412 VCPIP1Q96JH7 1222 aa14.69□□□□□ -0.06
VIPAS39-208ENST00000556412 PDLIM2Q96JY6 352 aa14.69□□□□□ -0.06
VIPAS39-208ENST00000556412 NR2E1Q9Y466 385 aa14.69□□□□□ -0.06
VIPAS39-208ENST00000556412 EPN1Q9Y6I3 576 aaPredicted RBP14.69□□□□□ -0.06
VIPAS39-208ENST00000556412 SYNJ2BP-COX16A0A087WUM0 186 aa14.69□□□□□ -0.06
VIPAS39-208ENST00000556412 ZNF263O14978 683 aa14.69□□□□□ -0.06
VIPAS39-208ENST00000556412 FYNP06241 537 aa14.69□□□□□ -0.06
VIPAS39-208ENST00000556412 GLI1P08151 1106 aa14.69□□□□□ -0.06
VIPAS39-208ENST00000556412 H2AFZP0C0S5 128 aa14.69□□□□□ -0.06
VIPAS39-208ENST00000556412 MYBL1P10243 752 aa14.69□□□□□ -0.06
VIPAS39-208ENST00000556412 LAMP2P13473 410 aa14.69□□□□□ -0.06
VIPAS39-208ENST00000556412 TUBP50607 506 aa14.69□□□□□ -0.06
VIPAS39-208ENST00000556412 CCDC173Q0VFZ6 552 aa14.69□□□□□ -0.06
VIPAS39-208ENST00000556412 SYPL2Q5VXT5 272 aa14.69□□□□□ -0.06
VIPAS39-208ENST00000556412 DCUN1D2Q6PH85 259 aa14.69□□□□□ -0.06
VIPAS39-208ENST00000556412 H2AFVQ71UI9 128 aa14.69□□□□□ -0.06
VIPAS39-208ENST00000556412 ARID3BQ8IVW6 561 aaPredicted RBP14.69□□□□□ -0.06
VIPAS39-208ENST00000556412 CCDC112Q8NEF3 446 aa14.69□□□□□ -0.06
VIPAS39-208ENST00000556412 ADAM32Q8TC27 787 aa14.69□□□□□ -0.06
VIPAS39-208ENST00000556412 ATXN2LQ8WWM7 1075 aaKnown RBP14.69□□□□□ -0.06
VIPAS39-208ENST00000556412 CTNNBL1Q8WYA6 563 aaPredicted RBP14.69□□□□□ -0.06
VIPAS39-208ENST00000556412 MCEEQ96PE7 176 aa14.69□□□□□ -0.06
VIPAS39-208ENST00000556412 CDK5RAP1Q96SZ6 601 aaKnown RBP14.69□□□□□ -0.06
VIPAS39-208ENST00000556412 PARVAQ9NVD7 372 aa14.69□□□□□ -0.06
VIPAS39-208ENST00000556412 ASNSD1Q9NWL6 643 aa14.69□□□□□ -0.06
VIPAS39-208ENST00000556412 COX16Q9P0S2 106 aa14.69□□□□□ -0.06
VIPAS39-208ENST00000556412 SFMBT1Q9UHJ3 866 aa14.69□□□□□ -0.06
VIPAS39-208ENST00000556412 DNMT3LQ9UJW3 386 aa14.69□□□□□ -0.06
VIPAS39-208ENST00000556412 NENFQ9UMX5 172 aa14.69□□□□□ -0.06
VIPAS39-208ENST00000556412 CPQQ9Y646 472 aa14.69□□□□□ -0.06
VIPAS39-208ENST00000556412 ANKRD62A6NC57 917 aa14.68□□□□□ -0.06
VIPAS39-208ENST00000556412 DPYSL4O14531 572 aa14.68□□□□□ -0.06
VIPAS39-208ENST00000556412 DAB1O75553 588 aa14.68□□□□□ -0.06
VIPAS39-208ENST00000556412 PRAMEF12O95522 483 aa14.68□□□□□ -0.06
VIPAS39-208ENST00000556412 HMBSP08397 361 aa14.68□□□□□ -0.06
VIPAS39-208ENST00000556412 IRF1P10914 325 aa14.68□□□□□ -0.06
VIPAS39-208ENST00000556412 VIPR2P41587 438 aa14.68□□□□□ -0.06
VIPAS39-208ENST00000556412 MAGEA1P43355 309 aa14.68□□□□□ -0.06
VIPAS39-208ENST00000556412 GPC5P78333 572 aa14.68□□□□□ -0.06
VIPAS39-208ENST00000556412 JOSD2Q8TAC2 188 aa14.68□□□□□ -0.06
VIPAS39-208ENST00000556412 SMARCD2Q92925 531 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms