RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 ANO10Q9NW15 660 aa12.14□□□□□ -0.47
SLIRP-205ENST00000556310 OSER1Q9NX31 292 aa12.14□□□□□ -0.47
SLIRP-205ENST00000556310 CFAP97Q9P2B7 532 aa12.14□□□□□ -0.47
SLIRP-205ENST00000556310 APEX2Q9UBZ4 518 aa12.14□□□□□ -0.47
SLIRP-205ENST00000556310 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.14□□□□□ -0.47
SLIRP-205ENST00000556310 NFE2L3Q9Y4A8 694 aa12.14□□□□□ -0.47
SLIRP-205ENST00000556310 VPS13AQ96RL7 3174 aa12.13□□□□□ -0.47
SLIRP-205ENST00000556310 A0A1W2PQH9 124 aa12.13□□□□□ -0.47
SLIRP-205ENST00000556310 E2F8A0AVK6 867 aa12.13□□□□□ -0.47
SLIRP-205ENST00000556310 RNF225M0QZC1 329 aaPredicted RBP12.13□□□□□ -0.47
SLIRP-205ENST00000556310 TULP2O00295 520 aa12.13□□□□□ -0.47
SLIRP-205ENST00000556310 CHRNB1P11230 501 aa12.13□□□□□ -0.47
SLIRP-205ENST00000556310 KRT5P13647 590 aa12.13□□□□□ -0.47
SLIRP-205ENST00000556310 SLC9A1P19634 815 aa12.13□□□□□ -0.47
SLIRP-205ENST00000556310 BRD2P25440 801 aaKnown RBP12.13□□□□□ -0.47
SLIRP-205ENST00000556310 PON1P27169 355 aa12.13□□□□□ -0.47
SLIRP-205ENST00000556310 GJA4P35212 333 aa12.13□□□□□ -0.47
SLIRP-205ENST00000556310 PLA2G4AP47712 749 aa12.13□□□□□ -0.47
SLIRP-205ENST00000556310 MFAP3P55082 362 aa12.13□□□□□ -0.47
SLIRP-205ENST00000556310 PON2Q15165 354 aa12.13□□□□□ -0.47
SLIRP-205ENST00000556310 CNGA2Q16280 664 aa12.13□□□□□ -0.47
SLIRP-205ENST00000556310 PROX2Q3B8N5 592 aa12.13□□□□□ -0.47
SLIRP-205ENST00000556310 VWA3BQ502W6 1294 aa12.13□□□□□ -0.47
SLIRP-205ENST00000556310 HSP90AA4PQ58FG1 418 aa12.13□□□□□ -0.47
SLIRP-205ENST00000556310 TCP11X2Q5H9J9 407 aa12.13□□□□□ -0.47
SLIRP-205ENST00000556310 MIIPQ5JXC2 388 aa12.13□□□□□ -0.47
SLIRP-205ENST00000556310 KLHDC10Q6PID8 442 aa12.13□□□□□ -0.47
SLIRP-205ENST00000556310 C11orf57Q6ZUT1 292 aaPredicted RBP12.13□□□□□ -0.47
SLIRP-205ENST00000556310 SCD5Q86SK9 330 aa12.13□□□□□ -0.47
SLIRP-205ENST00000556310 TADA2BQ86TJ2 420 aa12.13□□□□□ -0.47
SLIRP-205ENST00000556310 ARHGAP18Q8N392 663 aa12.13□□□□□ -0.47
SLIRP-205ENST00000556310 ZNF276Q8N554 614 aa12.13□□□□□ -0.47
SLIRP-205ENST00000556310 CDK5RAP1Q96SZ6 601 aaKnown RBP12.13□□□□□ -0.47
SLIRP-205ENST00000556310 ZSWIM1Q9BR11 485 aa12.13□□□□□ -0.47
SLIRP-205ENST00000556310 SAMSN1Q9NSI8 373 aaKnown RBP12.13□□□□□ -0.47
SLIRP-205ENST00000556310 SPATA6Q9NWH7 488 aaPredicted RBP12.13□□□□□ -0.47
SLIRP-205ENST00000556310 CLIC5Q9NZA1 410 aa12.13□□□□□ -0.47
SLIRP-205ENST00000556310 NAGPAQ9UK23 515 aa12.13□□□□□ -0.47
SLIRP-205ENST00000556310 MYOFQ9NZM1 2061 aa12.12□□□□□ -0.47
SLIRP-205ENST00000556310 M0QYV0 167 aa12.12□□□□□ -0.47
SLIRP-205ENST00000556310 LAMTOR5O43504 91 aa12.12□□□□□ -0.47
SLIRP-205ENST00000556310 ZBED1O96006 694 aa12.12□□□□□ -0.47
SLIRP-205ENST00000556310 RALAP11233 206 aa12.12□□□□□ -0.47
SLIRP-205ENST00000556310 RARGP13631 454 aa12.12□□□□□ -0.47
SLIRP-205ENST00000556310 ATP5C1P36542 298 aaKnown RBP12.12□□□□□ -0.47
SLIRP-205ENST00000556310 TKTL1P51854 596 aa12.12□□□□□ -0.47
SLIRP-205ENST00000556310 GOLGA8FQ08AF8 430 aa12.12□□□□□ -0.47
SLIRP-205ENST00000556310 GOLGA8DPQ0D2H9 430 aa12.12□□□□□ -0.47
SLIRP-205ENST00000556310 ADIGQ0VDE8 80 aa12.12□□□□□ -0.47
SLIRP-205ENST00000556310 NR1H3Q13133 447 aa12.12□□□□□ -0.47
SLIRP-205ENST00000556310 CCINQ13939 588 aa12.12□□□□□ -0.47
SLIRP-205ENST00000556310 MEA1Q16626 185 aa12.12□□□□□ -0.47
SLIRP-205ENST00000556310 TMEM196Q5HYL7 178 aa12.12□□□□□ -0.47
SLIRP-205ENST00000556310 DGKKQ5KSL6 1271 aa12.12□□□□□ -0.47
SLIRP-205ENST00000556310 CDKAL1Q5VV42 579 aa12.12□□□□□ -0.47
SLIRP-205ENST00000556310 PM20D1Q6GTS8 502 aa12.12□□□□□ -0.47
SLIRP-205ENST00000556310 GJB7Q6PEY0 223 aa12.12□□□□□ -0.47
SLIRP-205ENST00000556310 SIX6OS1Q8N1H7 587 aa12.12□□□□□ -0.47
SLIRP-205ENST00000556310 TTC13Q8NBP0 860 aa12.12□□□□□ -0.47
SLIRP-205ENST00000556310 UBA3Q8TBC4 463 aa12.12□□□□□ -0.47
SLIRP-205ENST00000556310 KCTD13Q8WZ19 329 aa12.12□□□□□ -0.47
SLIRP-205ENST00000556310 SHC3Q92529 594 aa12.12□□□□□ -0.47
SLIRP-205ENST00000556310 ATOH1Q92858 354 aaPredicted RBP12.12□□□□□ -0.47
SLIRP-205ENST00000556310 EXOC4Q96A65 974 aa12.12□□□□□ -0.47
SLIRP-205ENST00000556310 OTUB2Q96DC9 234 aa12.12□□□□□ -0.47
SLIRP-205ENST00000556310 ULBP1Q9BZM6 244 aa12.12□□□□□ -0.47
SLIRP-205ENST00000556310 LINC00597Q9H2U6 94 aa12.12□□□□□ -0.47
SLIRP-205ENST00000556310 LMAN1LQ9HAT1 526 aa12.12□□□□□ -0.47
SLIRP-205ENST00000556310 LRRC4Q9HBW1 653 aa12.12□□□□□ -0.47
SLIRP-205ENST00000556310 SIX2Q9NPC8 291 aa12.12□□□□□ -0.47
SLIRP-205ENST00000556310 PRMT8Q9NR22 394 aaPredicted RBP12.12□□□□□ -0.47
SLIRP-205ENST00000556310 FAM86C1Q9NVL1 165 aa12.12□□□□□ -0.47
SLIRP-205ENST00000556310 TMEM63CQ9P1W3 806 aa12.12□□□□□ -0.47
SLIRP-205ENST00000556310 TBC1D14Q9P2M4 693 aa12.12□□□□□ -0.47
SLIRP-205ENST00000556310 SH3BP1Q9Y3L3 701 aa12.12□□□□□ -0.47
SLIRP-205ENST00000556310 MYO15AQ9UKN7 3530 aa12.12□□□□□ -0.47
SLIRP-205ENST00000556310 TRDMT1O14717 391 aaKnown RBP12.11□□□□□ -0.47
SLIRP-205ENST00000556310 SCAMP3O14828 347 aaKnown RBP12.11□□□□□ -0.47
SLIRP-205ENST00000556310 TBX18O95935 607 aa12.11□□□□□ -0.47
SLIRP-205ENST00000556310 CALCAP01258 141 aa12.11□□□□□ -0.47
SLIRP-205ENST00000556310 CYP17A1P05093 508 aa12.11□□□□□ -0.47
SLIRP-205ENST00000556310 GNA15P30679 374 aa12.11□□□□□ -0.47
SLIRP-205ENST00000556310 YWHAGP61981 247 aaKnown RBP eCLIP12.11□□□□□ -0.47
SLIRP-205ENST00000556310 MYL5Q02045 173 aa12.11□□□□□ -0.47
SLIRP-205ENST00000556310 APBA1Q02410 837 aa12.11□□□□□ -0.47
SLIRP-205ENST00000556310 MTAPQ13126 283 aa12.11□□□□□ -0.47
SLIRP-205ENST00000556310 ARHGAP44Q17R89 818 aa12.11□□□□□ -0.47
SLIRP-205ENST00000556310 C10orf120Q5SQS8 335 aa12.11□□□□□ -0.47
SLIRP-205ENST00000556310 DMRTA1Q5VZB9 504 aa12.11□□□□□ -0.47
SLIRP-205ENST00000556310 BHLHA9Q7RTU4 235 aa12.11□□□□□ -0.47
SLIRP-205ENST00000556310 MAML2Q8IZL2 1156 aaPredicted RBP12.11□□□□□ -0.47
SLIRP-205ENST00000556310 SCML4Q8N228 414 aa12.11□□□□□ -0.47
SLIRP-205ENST00000556310 SYNPOQ8N3V7 929 aa12.11□□□□□ -0.47
SLIRP-205ENST00000556310 SLC35F5Q8WV83 523 aa12.11□□□□□ -0.47
SLIRP-205ENST00000556310 SECISBP2LQ93073 1101 aaKnown RBP12.11□□□□□ -0.47
SLIRP-205ENST00000556310 KLF16Q9BXK1 252 aaPredicted RBP12.11□□□□□ -0.47
SLIRP-205ENST00000556310 CNGB3Q9NQW8 809 aa12.11□□□□□ -0.47
SLIRP-205ENST00000556310 RBM12Q9NTZ6 932 aaKnown RBP12.11□□□□□ -0.47
SLIRP-205ENST00000556310 DNMT3LQ9UJW3 386 aa12.11□□□□□ -0.47
SLIRP-205ENST00000556310 FBXO4Q9UKT5 387 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms