RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 ATF2P15336 505 aa9.78□□□□□ -0.84
GTF2A1-204ENST00000556268 KCNE1P15382 129 aa9.78□□□□□ -0.84
GTF2A1-204ENST00000556268 FCARP24071 287 aa9.78□□□□□ -0.84
GTF2A1-204ENST00000556268 TKTP29401 623 aaKnown RBP9.78□□□□□ -0.84
GTF2A1-204ENST00000556268 RPL9P32969 192 aaKnown RBP9.78□□□□□ -0.84
GTF2A1-204ENST00000556268 BRCC3P46736 316 aa9.78□□□□□ -0.84
GTF2A1-204ENST00000556268 ARHGAP8P85298 464 aa9.78□□□□□ -0.84
GTF2A1-204ENST00000556268 ROR1Q01973 937 aa9.78□□□□□ -0.84
GTF2A1-204ENST00000556268 MTAPQ13126 283 aa9.78□□□□□ -0.84
GTF2A1-204ENST00000556268 ORC2Q13416 577 aaPredicted RBP9.78□□□□□ -0.84
GTF2A1-204ENST00000556268 PDIA5Q14554 519 aa9.78□□□□□ -0.84
GTF2A1-204ENST00000556268 PPP2R5AQ15172 486 aa9.78□□□□□ -0.84
GTF2A1-204ENST00000556268 FAM78AQ5JUQ0 283 aa9.78□□□□□ -0.84
GTF2A1-204ENST00000556268 LCE3BQ5TA77 95 aa9.78□□□□□ -0.84
GTF2A1-204ENST00000556268 ATF7IP2Q5U623 682 aa9.78□□□□□ -0.84
GTF2A1-204ENST00000556268 MPZL3Q6UWV2 235 aa9.78□□□□□ -0.84
GTF2A1-204ENST00000556268 ZNF655Q8N720 491 aaPredicted RBP9.78□□□□□ -0.84
GTF2A1-204ENST00000556268 RBBP8NLQ8NC74 664 aaPredicted RBP9.78□□□□□ -0.84
GTF2A1-204ENST00000556268 DNASE1L2Q92874 299 aa9.78□□□□□ -0.84
GTF2A1-204ENST00000556268 ZMAT2Q96NC0 199 aaKnown RBP9.78□□□□□ -0.84
GTF2A1-204ENST00000556268 ACO2Q99798 780 aaKnown RBP9.78□□□□□ -0.84
GTF2A1-204ENST00000556268 NTPCRQ9BSD7 190 aaKnown RBP9.78□□□□□ -0.84
GTF2A1-204ENST00000556268 FOXP3Q9BZS1 431 aa9.78□□□□□ -0.84
GTF2A1-204ENST00000556268 SP110Q9HB58 689 aa9.78□□□□□ -0.84
GTF2A1-204ENST00000556268 TRPV4Q9HBA0 871 aa9.78□□□□□ -0.84
GTF2A1-204ENST00000556268 POLD4Q9HCU8 107 aa9.78□□□□□ -0.84
GTF2A1-204ENST00000556268 HEBP1Q9NRV9 189 aa9.78□□□□□ -0.84
GTF2A1-204ENST00000556268 FAM53CQ9NYF3 392 aa9.78□□□□□ -0.84
GTF2A1-204ENST00000556268 EFR3BQ9Y2G0 817 aa9.78□□□□□ -0.84
GTF2A1-204ENST00000556268 ARID2Q68CP9 1835 aa9.77□□□□□ -0.84
GTF2A1-204ENST00000556268 CACNA1BQ00975 2339 aa9.77□□□□□ -0.85
GTF2A1-204ENST00000556268 WDR27A2RRH5 827 aa9.77□□□□□ -0.85
GTF2A1-204ENST00000556268 I3L4J1 428 aa9.77□□□□□ -0.85
GTF2A1-204ENST00000556268 ABLIM1O14639 778 aa9.77□□□□□ -0.85
GTF2A1-204ENST00000556268 ZNF197O14709 1029 aa9.77□□□□□ -0.85
GTF2A1-204ENST00000556268 SYN3O14994 580 aa9.77□□□□□ -0.85
GTF2A1-204ENST00000556268 MEFVO15553 781 aaPredicted RBP9.77□□□□□ -0.85
GTF2A1-204ENST00000556268 JAK2O60674 1132 aa9.77□□□□□ -0.85
GTF2A1-204ENST00000556268 LARGE1O95461 756 aa9.77□□□□□ -0.85
GTF2A1-204ENST00000556268 SEC24AO95486 1093 aa9.77□□□□□ -0.85
GTF2A1-204ENST00000556268 PROZP22891 400 aa9.77□□□□□ -0.85
GTF2A1-204ENST00000556268 MCM7P33993 719 aa9.77□□□□□ -0.85
GTF2A1-204ENST00000556268 CCR2P41597 374 aa9.77□□□□□ -0.85
GTF2A1-204ENST00000556268 SOX9P48436 509 aa9.77□□□□□ -0.85
GTF2A1-204ENST00000556268 EPHA5P54756 1037 aa9.77□□□□□ -0.85
GTF2A1-204ENST00000556268 COL9A2Q14055 689 aaPredicted RBP9.77□□□□□ -0.85
GTF2A1-204ENST00000556268 TPGS2Q68CL5 300 aa9.77□□□□□ -0.85
GTF2A1-204ENST00000556268 RNF111Q6ZNA4 994 aa9.77□□□□□ -0.85
GTF2A1-204ENST00000556268 TPRG1Q6ZUI0 275 aa9.77□□□□□ -0.85
GTF2A1-204ENST00000556268 ERMNQ8TAM6 284 aa9.77□□□□□ -0.85
GTF2A1-204ENST00000556268 DEPTORQ8TB45 409 aa9.77□□□□□ -0.85
GTF2A1-204ENST00000556268 ING5Q8WYH8 240 aa9.77□□□□□ -0.85
GTF2A1-204ENST00000556268 KIFAP3Q92845 792 aa9.77□□□□□ -0.85
GTF2A1-204ENST00000556268 TCEAL4Q96EI5 215 aa9.77□□□□□ -0.85
GTF2A1-204ENST00000556268 ZSWIM3Q96MP5 696 aa9.77□□□□□ -0.85
GTF2A1-204ENST00000556268 KIFC3Q9BVG8 833 aa9.77□□□□□ -0.85
GTF2A1-204ENST00000556268 ZFP14Q9HCL3 533 aa9.77□□□□□ -0.85
GTF2A1-204ENST00000556268 ZNF334Q9HCZ1 680 aaPredicted RBP9.77□□□□□ -0.85
GTF2A1-204ENST00000556268 EBF1Q9UH73 591 aa9.77□□□□□ -0.85
GTF2A1-204ENST00000556268 VWA8A3KMH1 1905 aa9.77□□□□□ -0.85
GTF2A1-204ENST00000556268 ACACBO00763 2458 aa9.77□□□□□ -0.85
GTF2A1-204ENST00000556268 MYH15Q9Y2K3 1946 aa9.76□□□□□ -0.85
GTF2A1-204ENST00000556268 ARHGEF35A5YM69 484 aa9.76□□□□□ -0.85
GTF2A1-204ENST00000556268 H7C4K7 107 aa9.76□□□□□ -0.85
GTF2A1-204ENST00000556268 ARNTLO00327 626 aa9.76□□□□□ -0.85
GTF2A1-204ENST00000556268 CEBPBP17676 345 aa9.76□□□□□ -0.85
GTF2A1-204ENST00000556268 GUCY2CP25092 1073 aa9.76□□□□□ -0.85
GTF2A1-204ENST00000556268 ELF1P32519 619 aa9.76□□□□□ -0.85
GTF2A1-204ENST00000556268 NPTX2P47972 431 aa9.76□□□□□ -0.85
GTF2A1-204ENST00000556268 ZNF174Q15697 407 aa9.76□□□□□ -0.85
GTF2A1-204ENST00000556268 GLRA4Q5JXX5 417 aa9.76□□□□□ -0.85
GTF2A1-204ENST00000556268 TDRD10Q5VZ19 366 aaKnown RBP9.76□□□□□ -0.85
GTF2A1-204ENST00000556268 TSSK4Q6SA08 328 aa9.76□□□□□ -0.85
GTF2A1-204ENST00000556268 APBB1IPQ7Z5R6 666 aaPredicted RBP9.76□□□□□ -0.85
GTF2A1-204ENST00000556268 DAW1Q8N136 415 aa9.76□□□□□ -0.85
GTF2A1-204ENST00000556268 CELF5Q8N6W0 485 aaKnown RBP9.76□□□□□ -0.85
GTF2A1-204ENST00000556268 BEST2Q8NFU1 509 aa9.76□□□□□ -0.85
GTF2A1-204ENST00000556268 SMARCD2Q92925 531 aa9.76□□□□□ -0.85
GTF2A1-204ENST00000556268 IFT74Q96LB3 600 aa9.76□□□□□ -0.85
GTF2A1-204ENST00000556268 DHRS1Q96LJ7 313 aa9.76□□□□□ -0.85
GTF2A1-204ENST00000556268 SPATA32Q96LK8 384 aa9.76□□□□□ -0.85
GTF2A1-204ENST00000556268 IER2Q9BTL4 223 aa9.76□□□□□ -0.85
GTF2A1-204ENST00000556268 TRMT61BQ9BVS5 477 aaKnown RBP9.76□□□□□ -0.85
GTF2A1-204ENST00000556268 FOXP1Q9H334 677 aaPredicted RBP9.76□□□□□ -0.85
GTF2A1-204ENST00000556268 LMAN1LQ9HAT1 526 aa9.76□□□□□ -0.85
GTF2A1-204ENST00000556268 SLC38A7Q9NVC3 462 aa9.76□□□□□ -0.85
GTF2A1-204ENST00000556268 GFOD1Q9NXC2 390 aa9.76□□□□□ -0.85
GTF2A1-204ENST00000556268 NCDNQ9UBB6 729 aa9.76□□□□□ -0.85
GTF2A1-204ENST00000556268 FBXL5Q9UKA1 691 aa9.76□□□□□ -0.85
GTF2A1-204ENST00000556268 TCFL5Q9UL49 500 aa9.76□□□□□ -0.85
GTF2A1-204ENST00000556268 SMG5Q9UPR3 1016 aaKnown RBP9.76□□□□□ -0.85
GTF2A1-204ENST00000556268 ZNF281Q9Y2X9 895 aa9.76□□□□□ -0.85
GTF2A1-204ENST00000556268 COL4A3Q01955 1670 aa9.76□□□□□ -0.85
GTF2A1-204ENST00000556268 OAZ2O95190 189 aa9.75□□□□□ -0.85
GTF2A1-204ENST00000556268 LRG1P02750 347 aa9.75□□□□□ -0.85
GTF2A1-204ENST00000556268 OR52Z1P0C646 297 aa9.75□□□□□ -0.85
GTF2A1-204ENST00000556268 CHRNB1P11230 501 aa9.75□□□□□ -0.85
GTF2A1-204ENST00000556268 PSMC3P17980 439 aa9.75□□□□□ -0.85
GTF2A1-204ENST00000556268 PMS1P54277 932 aaKnown RBP9.75□□□□□ -0.85
GTF2A1-204ENST00000556268 PCBP3P57721 371 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms