RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 GRIA4P48058 902 aa7.44□□□□□ -1.22
ATXN3-236ENST00000556220 YWHAHQ04917 246 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-236ENST00000556220 GFPT1Q06210 699 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-236ENST00000556220 PSMD2Q13200 908 aa7.44□□□□□ -1.22
ATXN3-236ENST00000556220 SLC14A1Q13336 389 aa7.44□□□□□ -1.22
ATXN3-236ENST00000556220 KRT32Q14532 448 aa7.44□□□□□ -1.22
ATXN3-236ENST00000556220 PDGFRLQ15198 375 aa7.44□□□□□ -1.22
ATXN3-236ENST00000556220 DUOXA1Q1HG43 343 aa7.44□□□□□ -1.22
ATXN3-236ENST00000556220 ATF7IP2Q5U623 682 aa7.44□□□□□ -1.22
ATXN3-236ENST00000556220 LARP1BQ659C4 914 aaKnown RBP7.44□□□□□ -1.22
ATXN3-236ENST00000556220 CC2D1AQ6P1N0 951 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-236ENST00000556220 Q6ZUG5 572 aa7.44□□□□□ -1.22
ATXN3-236ENST00000556220 ARMCX6Q7L4S7 300 aa7.44□□□□□ -1.22
ATXN3-236ENST00000556220 ZNF605Q86T29 641 aa7.44□□□□□ -1.22
ATXN3-236ENST00000556220 FAM177A1Q8N128 213 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-236ENST00000556220 FBXL16Q8N461 479 aa7.44□□□□□ -1.22
ATXN3-236ENST00000556220 MDGA1Q8NFP4 955 aa7.44□□□□□ -1.22
ATXN3-236ENST00000556220 DEPTORQ8TB45 409 aa7.44□□□□□ -1.22
ATXN3-236ENST00000556220 USP33Q8TEY7 942 aa7.44□□□□□ -1.22
ATXN3-236ENST00000556220 RLN3Q8WXF3 142 aa7.44□□□□□ -1.22
ATXN3-236ENST00000556220 USP13Q92995 863 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-236ENST00000556220 C18orf25Q96B23 403 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-236ENST00000556220 CAMK1GQ96NX5 476 aa7.44□□□□□ -1.22
ATXN3-236ENST00000556220 NAP1L4Q99733 375 aaKnown RBP7.44□□□□□ -1.22
ATXN3-236ENST00000556220 ARID3AQ99856 593 aa7.44□□□□□ -1.22
ATXN3-236ENST00000556220 CCDC94Q9BW85 323 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-236ENST00000556220 FSCN3Q9NQT6 498 aa7.44□□□□□ -1.22
ATXN3-236ENST00000556220 TDP1Q9NUW8 608 aa7.44□□□□□ -1.22
ATXN3-236ENST00000556220 HSFX1Q9UBD0 423 aa7.44□□□□□ -1.22
ATXN3-236ENST00000556220 CCL26Q9Y258 94 aa7.44□□□□□ -1.22
ATXN3-236ENST00000556220 TNFSF13BQ9Y275 285 aa7.44□□□□□ -1.22
ATXN3-236ENST00000556220 RAI2Q9Y5P3 530 aa7.44□□□□□ -1.22
ATXN3-236ENST00000556220 KNL1Q8NG31 2342 aa7.44□□□□□ -1.22
ATXN3-236ENST00000556220 MTMR11A4FU01 709 aa7.43□□□□□ -1.22
ATXN3-236ENST00000556220 SOAT2O75908 522 aa7.43□□□□□ -1.22
ATXN3-236ENST00000556220 ALDH1A2O94788 518 aa7.43□□□□□ -1.22
ATXN3-236ENST00000556220 CFIP05156 583 aa7.43□□□□□ -1.22
ATXN3-236ENST00000556220 ADH5P11766 374 aa7.43□□□□□ -1.22
ATXN3-236ENST00000556220 CPA1P15085 419 aa7.43□□□□□ -1.22
ATXN3-236ENST00000556220 ITPKAP23677 461 aa7.43□□□□□ -1.22
ATXN3-236ENST00000556220 MAOBP27338 520 aa7.43□□□□□ -1.22
ATXN3-236ENST00000556220 AVPR1AP37288 418 aa7.43□□□□□ -1.22
ATXN3-236ENST00000556220 TUFMP49411 452 aaKnown RBP7.43□□□□□ -1.22
ATXN3-236ENST00000556220 OSTNP61366 133 aa7.43□□□□□ -1.22
ATXN3-236ENST00000556220 CCT2P78371 535 aaKnown RBP7.43□□□□□ -1.22
ATXN3-236ENST00000556220 SSRP1Q08945 709 aaKnown RBP7.43□□□□□ -1.22
ATXN3-236ENST00000556220 BFSP1Q12934 665 aa7.43□□□□□ -1.22
ATXN3-236ENST00000556220 MYBPC2Q14324 1141 aa7.43□□□□□ -1.22
ATXN3-236ENST00000556220 POU4F3Q15319 338 aa7.43□□□□□ -1.22
ATXN3-236ENST00000556220 CRY1Q16526 586 aa7.43□□□□□ -1.22
ATXN3-236ENST00000556220 MSMPQ1L6U9 139 aa7.43□□□□□ -1.22
ATXN3-236ENST00000556220 LYSMD4Q5XG99 296 aa7.43□□□□□ -1.22
ATXN3-236ENST00000556220 TOGARAM2Q6ZUX3 1019 aa7.43□□□□□ -1.22
ATXN3-236ENST00000556220 MINDY1Q8N5J2 469 aa7.43□□□□□ -1.22
ATXN3-236ENST00000556220 FRMD1Q8N878 549 aa7.43□□□□□ -1.22
ATXN3-236ENST00000556220 LSM14AQ8ND56 463 aaKnown RBP7.43□□□□□ -1.22
ATXN3-236ENST00000556220 RIN3Q8TB24 985 aa7.43□□□□□ -1.22
ATXN3-236ENST00000556220 CRELD1Q96HD1 420 aa7.43□□□□□ -1.22
ATXN3-236ENST00000556220 ACAP3Q96P50 834 aa7.43□□□□□ -1.22
ATXN3-236ENST00000556220 GCNAQ96QF7 691 aa7.43□□□□□ -1.22
ATXN3-236ENST00000556220 CAPN10Q9HC96 672 aa7.43□□□□□ -1.22
ATXN3-236ENST00000556220 PTPRHQ9HD43 1115 aa7.43□□□□□ -1.22
ATXN3-236ENST00000556220 PCDHA12Q9UN75 941 aa7.43□□□□□ -1.22
ATXN3-236ENST00000556220 APOBEC2Q9Y235 224 aaKnown RBP7.43□□□□□ -1.22
ATXN3-236ENST00000556220 TIMM13Q9Y5L4 95 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-236ENST00000556220 PDCD11Q14690 1871 aaKnown RBP7.43□□□□□ -1.22
ATXN3-236ENST00000556220 PTPRQQ9UMZ3 2332 aa7.43□□□□□ -1.22
ATXN3-236ENST00000556220 K7EQS6 105 aa7.42□□□□□ -1.22
ATXN3-236ENST00000556220 DEXIO95424 95 aa7.42□□□□□ -1.22
ATXN3-236ENST00000556220 LARGE1O95461 756 aa7.42□□□□□ -1.22
ATXN3-236ENST00000556220 PRNPP04156 253 aa7.42□□□□□ -1.22
ATXN3-236ENST00000556220 HNRNPLP14866 589 aaKnown RBP eCLIP7.42□□□□□ -1.22
ATXN3-236ENST00000556220 CYP11B2P19099 503 aa7.42□□□□□ -1.22
ATXN3-236ENST00000556220 DDX6P26196 483 aaKnown RBP eCLIP7.42□□□□□ -1.22
ATXN3-236ENST00000556220 PDIA3P30101 505 aaKnown RBP7.42□□□□□ -1.22
ATXN3-236ENST00000556220 EFNA5P52803 228 aa7.42□□□□□ -1.22
ATXN3-236ENST00000556220 CYP4F3Q08477 520 aa7.42□□□□□ -1.22
ATXN3-236ENST00000556220 BYSLQ13895 437 aaKnown RBP7.42□□□□□ -1.22
ATXN3-236ENST00000556220 ZNF268Q14587 947 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-236ENST00000556220 PPP2R5AQ15172 486 aa7.42□□□□□ -1.22
ATXN3-236ENST00000556220 SPRED3Q2MJR0 410 aa7.42□□□□□ -1.22
ATXN3-236ENST00000556220 C2orf27AQ580R0 203 aa7.42□□□□□ -1.22
ATXN3-236ENST00000556220 LMBRD2Q68DH5 695 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-236ENST00000556220 ARMCX5Q6P1M9 558 aa7.42□□□□□ -1.22
ATXN3-236ENST00000556220 TMPRSS7Q7RTY8 843 aa7.42□□□□□ -1.22
ATXN3-236ENST00000556220 RABEPKQ7Z6M1 372 aa7.42□□□□□ -1.22
ATXN3-236ENST00000556220 ZAR1Q86SH2 424 aa7.42□□□□□ -1.22
ATXN3-236ENST00000556220 USP37Q86T82 979 aa7.42□□□□□ -1.22
ATXN3-236ENST00000556220 TMEM150AQ86TG1 271 aa7.42□□□□□ -1.22
ATXN3-236ENST00000556220 SLCO6A1Q86UG4 719 aa7.42□□□□□ -1.22
ATXN3-236ENST00000556220 TTC30AQ86WT1 665 aa7.42□□□□□ -1.22
ATXN3-236ENST00000556220 LURAP1LQ8IV03 231 aa7.42□□□□□ -1.22
ATXN3-236ENST00000556220 ZNF843Q8N446 348 aa7.42□□□□□ -1.22
ATXN3-236ENST00000556220 CPA6Q8N4T0 437 aa7.42□□□□□ -1.22
ATXN3-236ENST00000556220 TTC9BQ8N6N2 239 aa7.42□□□□□ -1.22
ATXN3-236ENST00000556220 MAB21L3Q8N8X9 362 aa7.42□□□□□ -1.22
ATXN3-236ENST00000556220 OR2I1PQ8NGU4 316 aa7.42□□□□□ -1.22
ATXN3-236ENST00000556220 OSCP1Q8WVF1 389 aa7.42□□□□□ -1.22
ATXN3-236ENST00000556220 ACO2Q99798 780 aaKnown RBP7.42□□□□□ -1.22
ATXN3-236ENST00000556220 KIFC3Q9BVG8 833 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms