RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 LPCAT2Q7L5N7 544 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 PCGF5Q86SE9 256 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 JAMLQ86YT9 394 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 SPATA2LQ8IUW3 424 aaPredicted RBP6.23□□□□□ -1.41
PRKCH-220ENST00000556164 WDR75Q8IWA0 830 aaKnown RBP6.23□□□□□ -1.41
PRKCH-220ENST00000556164 RAVER1Q8IY67 606 aaKnown RBP6.23□□□□□ -1.41
PRKCH-220ENST00000556164 TMEFF1Q8IYR6 380 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 ZNF511Q8NB15 262 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 RASSF8Q8NHQ8 419 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 EPS8L3Q8TE67 593 aaKnown RBP6.23□□□□□ -1.41
PRKCH-220ENST00000556164 WHAMMQ8TF30 809 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 HMGB4Q8WW32 186 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 RLN3Q8WXF3 142 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 POMGNT1Q8WZA1 660 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 CALML4Q96GE6 196 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 MYRFLQ96LU7 910 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 ZSCAN31Q96LW9 406 aaPredicted RBP6.23□□□□□ -1.41
PRKCH-220ENST00000556164 KCTD15Q96SI1 283 aaPredicted RBP6.23□□□□□ -1.41
PRKCH-220ENST00000556164 ACBD6Q9BR61 282 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 LINC00597Q9H2U6 94 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 ABCB6Q9NP58 842 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 GCNT4Q9P109 453 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 SERTAD1Q9UHV2 236 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 EVLQ9UI08 416 aaPredicted RBP6.23□□□□□ -1.41
PRKCH-220ENST00000556164 GTF3C4Q9UKN8 822 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 L1RE1Q9UN81 338 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 NEUROG3Q9Y4Z2 214 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 PCDHB3Q9Y5E6 796 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 PCDH15Q96QU1 1955 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 SPEGQ15772 3267 aa6.23□□□□□ -1.41
PRKCH-220ENST00000556164 PTPRBP23467 1997 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 MYMKA6NI61 221 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 SGK1O00141 431 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 LEFTY2O00292 366 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 HCRTO43612 131 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 KLF8O95600 359 aaPredicted RBP6.22□□□□□ -1.41
PRKCH-220ENST00000556164 CYP17A1P05093 508 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 ITGB3P05106 788 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 CFIP05156 583 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 KRT19P08727 400 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 HNRNPLP14866 589 aaKnown RBP eCLIP6.22□□□□□ -1.41
PRKCH-220ENST00000556164 PLCG1P19174 1290 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 UBA7P41226 1012 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 P2RY2P41231 377 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 PTGER3P43115 390 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 PDE6CP51160 858 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 ATXN3P54252 364 aaPredicted RBP6.22□□□□□ -1.41
PRKCH-220ENST00000556164 MRPS21P82921 87 aaKnown RBP6.22□□□□□ -1.41
PRKCH-220ENST00000556164 GTF2BQ00403 316 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 KDSRQ06136 332 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 FOXD4Q12950 439 aaPredicted RBP6.22□□□□□ -1.41
PRKCH-220ENST00000556164 RESTQ13127 1097 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 GAB4Q2WGN9 574 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 C8orf34Q49A92 452 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 TM4SF20Q53R12 229 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 LYSMD4Q5XG99 296 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 ARL6IP4Q66PJ3 421 aaKnown RBP6.22□□□□□ -1.41
PRKCH-220ENST00000556164 CRELD2Q6UXH1 353 aaPredicted RBP6.22□□□□□ -1.41
PRKCH-220ENST00000556164 KRBA2Q6ZNG9 492 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 OSTM1Q86WC4 334 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 SYT12Q8IV01 421 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 SFTPA1Q8IWL2 248 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 ADGRF2Q8IZF7 708 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 TMEM86AQ8N2M4 240 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 HDDC3Q8N4P3 179 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 ALLCQ8N6M5 410 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 CELF2-AS1Q8N7Q2 184 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 FRMD1Q8N878 549 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 GPATCH11Q8N954 259 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 C1orf127Q8N9H9 656 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 TXNDC5Q8NBS9 432 aaKnown RBP6.22□□□□□ -1.41
PRKCH-220ENST00000556164 OR6P1Q8NGX9 317 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 OLIG1Q8TAK6 271 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 SPATA18Q8TC71 538 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 LRRC15Q8TF66 581 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 NOC3LQ8WTT2 800 aaKnown RBP6.22□□□□□ -1.41
PRKCH-220ENST00000556164 RAD54LQ92698 747 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 FOXJ1Q92949 421 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 SAAL1Q96ER3 474 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 FNBP1Q96RU3 617 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 FIZ1Q96SL8 496 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 SPSB2Q99619 263 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 PKMYT1Q99640 499 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 FAM213AQ9BRX8 229 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 GTPBP2Q9BX10 602 aaKnown RBP6.22□□□□□ -1.41
PRKCH-220ENST00000556164 IKZF4Q9H2S9 585 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 CAAP1Q9H8G2 361 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 POLMQ9NP87 494 aaPredicted RBP6.22□□□□□ -1.41
PRKCH-220ENST00000556164 ZDHHC4Q9NPG8 344 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 FSCN3Q9NQT6 498 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 BLOC1S4Q9NUP1 217 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 TMEM74BQ9NUR3 256 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 MBD1Q9UIS9 605 aaPredicted RBP6.22□□□□□ -1.41
PRKCH-220ENST00000556164 PPM1HQ9ULR3 514 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 ARHGAP26Q9UNA1 814 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 AGAP1Q9UPQ3 857 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 MAP4K5Q9Y4K4 846 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 SNX9Q9Y5X1 595 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 STYXL1Q9Y6J8 313 aa6.22□□□□□ -1.41
PRKCH-220ENST00000556164 PLXNB3Q9ULL4 1909 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms