RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 TRPC3Q13507 836 aa15.2■□□□□ 0.02
CHMP4BP1-201ENST00000556017 NCOA4Q13772 614 aa15.2■□□□□ 0.02
CHMP4BP1-201ENST00000556017 ZNF699Q32M78 642 aa15.2■□□□□ 0.02
CHMP4BP1-201ENST00000556017 UAP1L1Q3KQV9 507 aa15.2■□□□□ 0.02
CHMP4BP1-201ENST00000556017 RESP18Q5W5W9 173 aa15.2■□□□□ 0.02
CHMP4BP1-201ENST00000556017 KIAA1211LQ6NV74 962 aa15.2■□□□□ 0.02
CHMP4BP1-201ENST00000556017 SCARA5Q6ZMJ2 495 aa15.2■□□□□ 0.02
CHMP4BP1-201ENST00000556017 TOGARAM2Q6ZUX3 1019 aa15.2■□□□□ 0.02
CHMP4BP1-201ENST00000556017 SLC41A1Q8IVJ1 513 aa15.2■□□□□ 0.02
CHMP4BP1-201ENST00000556017 DEFB119Q8N690 84 aa15.2■□□□□ 0.02
CHMP4BP1-201ENST00000556017 C12orf29Q8N999 325 aa15.2■□□□□ 0.02
CHMP4BP1-201ENST00000556017 SMARCD1Q96GM5 515 aa15.2■□□□□ 0.02
CHMP4BP1-201ENST00000556017 TWNKQ96RR1 684 aa15.2■□□□□ 0.02
CHMP4BP1-201ENST00000556017 ADAM33Q9BZ11 813 aa15.2■□□□□ 0.02
CHMP4BP1-201ENST00000556017 NMUR1Q9HB89 426 aa15.2■□□□□ 0.02
CHMP4BP1-201ENST00000556017 KRT82Q9NSB4 513 aa15.2■□□□□ 0.02
CHMP4BP1-201ENST00000556017 CALCOCO1Q9P1Z2 691 aa15.2■□□□□ 0.02
CHMP4BP1-201ENST00000556017 CGNQ9P2M7 1197 aaKnown RBP15.2■□□□□ 0.02
CHMP4BP1-201ENST00000556017 PCDHA7Q9UN72 937 aa15.2■□□□□ 0.02
CHMP4BP1-201ENST00000556017 IGHV1OR15-9A0A0B4J2B8 117 aa15.19■□□□□ 0.02
CHMP4BP1-201ENST00000556017 PVALEFA0A1B0GWK0 134 aa15.19■□□□□ 0.02
CHMP4BP1-201ENST00000556017 TBC1D3BA6NDS4 549 aa15.19■□□□□ 0.02
CHMP4BP1-201ENST00000556017 UPK3BL1B0FP48 263 aa15.19■□□□□ 0.02
CHMP4BP1-201ENST00000556017 UPK3BL2E5RIL1 263 aa15.19■□□□□ 0.02
CHMP4BP1-201ENST00000556017 K7ELQ4 463 aaPredicted RBP15.19■□□□□ 0.02
CHMP4BP1-201ENST00000556017 CACNG3O60359 315 aa15.19■□□□□ 0.02
CHMP4BP1-201ENST00000556017 TLR5O60602 858 aa15.19■□□□□ 0.02
CHMP4BP1-201ENST00000556017 EXOC3O60645 756 aa15.19■□□□□ 0.02
CHMP4BP1-201ENST00000556017 CAPNS1P04632 268 aa15.19■□□□□ 0.02
CHMP4BP1-201ENST00000556017 CISD3P0C7P0 127 aa15.19■□□□□ 0.02
CHMP4BP1-201ENST00000556017 IRF1P10914 325 aa15.19■□□□□ 0.02
CHMP4BP1-201ENST00000556017 WASP42768 502 aa15.19■□□□□ 0.02
CHMP4BP1-201ENST00000556017 AFMP43652 599 aa15.19■□□□□ 0.02
CHMP4BP1-201ENST00000556017 ASPAP45381 313 aa15.19■□□□□ 0.02
CHMP4BP1-201ENST00000556017 NDST1P52848 882 aa15.19■□□□□ 0.02
CHMP4BP1-201ENST00000556017 FAM193AP78312 1265 aa15.19■□□□□ 0.02
CHMP4BP1-201ENST00000556017 ZACNQ401N2 412 aa15.19■□□□□ 0.02
CHMP4BP1-201ENST00000556017 ZNF667Q5HYK9 610 aa15.19■□□□□ 0.02
CHMP4BP1-201ENST00000556017 C10orf76Q5T2E6 689 aa15.19■□□□□ 0.02
CHMP4BP1-201ENST00000556017 SPOPLQ6IQ16 392 aa15.19■□□□□ 0.02
CHMP4BP1-201ENST00000556017 SLC9A9Q8IVB4 645 aa15.19■□□□□ 0.02
CHMP4BP1-201ENST00000556017 OR2I1PQ8NGU4 316 aa15.19■□□□□ 0.02
CHMP4BP1-201ENST00000556017 SLC2A14Q8TDB8 520 aa15.19■□□□□ 0.02
CHMP4BP1-201ENST00000556017 KCNV2Q8TDN2 545 aa15.19■□□□□ 0.02
CHMP4BP1-201ENST00000556017 MAGEF1Q9HAY2 307 aa15.19■□□□□ 0.02
CHMP4BP1-201ENST00000556017 CYLDQ9NQC7 956 aa15.19■□□□□ 0.02
CHMP4BP1-201ENST00000556017 COMMD8Q9NX08 183 aa15.19■□□□□ 0.02
CHMP4BP1-201ENST00000556017 MARK1Q9P0L2 795 aa15.19■□□□□ 0.02
CHMP4BP1-201ENST00000556017 DEC1Q9P2X7 70 aa15.19■□□□□ 0.02
CHMP4BP1-201ENST00000556017 SH3BP1Q9Y3L3 701 aa15.19■□□□□ 0.02
CHMP4BP1-201ENST00000556017 CELSR3Q9NYQ7 3312 aa15.19■□□□□ 0.02
CHMP4BP1-201ENST00000556017 PLXNB3Q9ULL4 1909 aa15.19■□□□□ 0.02
CHMP4BP1-201ENST00000556017 CKAP5Q14008 2032 aa15.19■□□□□ 0.02
CHMP4BP1-201ENST00000556017 ACTN4O43707 911 aaKnown RBP15.18■□□□□ 0.02
CHMP4BP1-201ENST00000556017 ASS1P00966 412 aaKnown RBP15.18■□□□□ 0.02
CHMP4BP1-201ENST00000556017 NDUFV2P19404 249 aa15.18■□□□□ 0.02
CHMP4BP1-201ENST00000556017 NTSR1P30989 418 aa15.18■□□□□ 0.02
CHMP4BP1-201ENST00000556017 HOXD12P35452 270 aa15.18■□□□□ 0.02
CHMP4BP1-201ENST00000556017 MAPK8P45983 427 aa15.18■□□□□ 0.02
CHMP4BP1-201ENST00000556017 LMAN2Q12907 356 aa15.18■□□□□ 0.02
CHMP4BP1-201ENST00000556017 ANO4Q32M45 955 aa15.18■□□□□ 0.02
CHMP4BP1-201ENST00000556017 LYSMD4Q5XG99 296 aa15.18■□□□□ 0.02
CHMP4BP1-201ENST00000556017 CLEC20AQ6ZU45 233 aa15.18■□□□□ 0.02
CHMP4BP1-201ENST00000556017 TNIP3Q96KP6 325 aa15.18■□□□□ 0.02
CHMP4BP1-201ENST00000556017 SPACA7Q96KW9 195 aa15.18■□□□□ 0.02
CHMP4BP1-201ENST00000556017 GABRG3Q99928 467 aa15.18■□□□□ 0.02
CHMP4BP1-201ENST00000556017 MED10Q9BTT4 135 aa15.18■□□□□ 0.02
CHMP4BP1-201ENST00000556017 SLC6A17Q9H1V8 727 aa15.18■□□□□ 0.02
CHMP4BP1-201ENST00000556017 FAM49BQ9NUQ9 324 aa15.18■□□□□ 0.02
CHMP4BP1-201ENST00000556017 BCCIPQ9P287 314 aaKnown RBP eCLIP15.18■□□□□ 0.02
CHMP4BP1-201ENST00000556017 FBXO10Q9UK96 956 aa15.18■□□□□ 0.02
CHMP4BP1-201ENST00000556017 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.17■□□□□ 0.02
CHMP4BP1-201ENST00000556017 SPAARA0A1B0GVQ0 90 aa15.17■□□□□ 0.02
CHMP4BP1-201ENST00000556017 MDM4O15151 490 aa15.17■□□□□ 0.02
CHMP4BP1-201ENST00000556017 CYP26A1O43174 497 aa15.17■□□□□ 0.02
CHMP4BP1-201ENST00000556017 MAP3K13O43283 966 aa15.17■□□□□ 0.02
CHMP4BP1-201ENST00000556017 HYAL3O43820 417 aaPredicted RBP15.17■□□□□ 0.02
CHMP4BP1-201ENST00000556017 PHACTR2O75167 634 aa15.17■□□□□ 0.02
CHMP4BP1-201ENST00000556017 GJB3O75712 270 aa15.17■□□□□ 0.02
CHMP4BP1-201ENST00000556017 CD59P13987 128 aa15.17■□□□□ 0.02
CHMP4BP1-201ENST00000556017 HOXB2P14652 356 aa15.17■□□□□ 0.02
CHMP4BP1-201ENST00000556017 MAP3K7CLP57077 242 aa15.17■□□□□ 0.02
CHMP4BP1-201ENST00000556017 BIRC3Q13489 604 aa15.17■□□□□ 0.02
CHMP4BP1-201ENST00000556017 FOXD4L5Q5VV16 416 aaPredicted RBP15.17■□□□□ 0.02
CHMP4BP1-201ENST00000556017 Q6ZNB5 142 aa15.17■□□□□ 0.02
CHMP4BP1-201ENST00000556017 SV2AQ7L0J3 742 aa15.17■□□□□ 0.02
CHMP4BP1-201ENST00000556017 FOXD4L4Q8WXT5 416 aaPredicted RBP15.17■□□□□ 0.02
CHMP4BP1-201ENST00000556017 ERLEC1Q96DZ1 483 aa15.17■□□□□ 0.02
CHMP4BP1-201ENST00000556017 ZNF396Q96N95 335 aaPredicted RBP15.17■□□□□ 0.02
CHMP4BP1-201ENST00000556017 NUSAP1Q9BXS6 441 aaKnown RBP15.17■□□□□ 0.02
CHMP4BP1-201ENST00000556017 APOBEC3GQ9HC16 384 aaKnown RBP15.17■□□□□ 0.02
CHMP4BP1-201ENST00000556017 DNAJC17Q9NVM6 304 aaKnown RBP15.17■□□□□ 0.02
CHMP4BP1-201ENST00000556017 SERTAD1Q9UHV2 236 aa15.17■□□□□ 0.02
CHMP4BP1-201ENST00000556017 KLK13Q9UKR3 277 aa15.17■□□□□ 0.02
CHMP4BP1-201ENST00000556017 CIZ1Q9ULV3 898 aaPredicted RBP15.17■□□□□ 0.02
CHMP4BP1-201ENST00000556017 SCML2Q9UQR0 700 aa15.17■□□□□ 0.02
CHMP4BP1-201ENST00000556017 ATP8B3O60423 1300 aa15.17■□□□□ 0.02
CHMP4BP1-201ENST00000556017 KNL1Q8NG31 2342 aa15.16■□□□□ 0.02
CHMP4BP1-201ENST00000556017 WASH3PC4AMC7 463 aa15.16■□□□□ 0.02
CHMP4BP1-201ENST00000556017 KLKB1P03952 638 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms