RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 RXFP2Q8WXD0 754 aa11.55□□□□□ -0.56
TMEM260-208ENST00000555905 OVCA2Q8WZ82 227 aa11.55□□□□□ -0.56
TMEM260-208ENST00000555905 KHSRPQ92945 711 aaKnown RBP eCLIP11.55□□□□□ -0.56
TMEM260-208ENST00000555905 PSMG2Q969U7 264 aa11.55□□□□□ -0.56
TMEM260-208ENST00000555905 TRMT2BQ96GJ1 504 aaKnown RBP11.55□□□□□ -0.56
TMEM260-208ENST00000555905 BTBD6Q96KE9 485 aa11.55□□□□□ -0.56
TMEM260-208ENST00000555905 MYRFLQ96LU7 910 aa11.55□□□□□ -0.56
TMEM260-208ENST00000555905 ZNF512Q96ME7 567 aaPredicted RBP11.55□□□□□ -0.56
TMEM260-208ENST00000555905 CNPY3Q9BT09 278 aa11.55□□□□□ -0.56
TMEM260-208ENST00000555905 TRIM7Q9C029 511 aa11.55□□□□□ -0.56
TMEM260-208ENST00000555905 NSUN3Q9H649 340 aaKnown RBP11.55□□□□□ -0.56
TMEM260-208ENST00000555905 TLR8Q9NR97 1041 aaKnown RBP11.55□□□□□ -0.56
TMEM260-208ENST00000555905 ABCC13Q9NSE7 274 aa11.55□□□□□ -0.56
TMEM260-208ENST00000555905 GMIPQ9P107 970 aa11.55□□□□□ -0.56
TMEM260-208ENST00000555905 STAP1Q9ULZ2 295 aa11.55□□□□□ -0.56
TMEM260-208ENST00000555905 CAPN6Q9Y6Q1 641 aa11.55□□□□□ -0.56
TMEM260-208ENST00000555905 TRANK1O15050 2925 aa11.55□□□□□ -0.56
TMEM260-208ENST00000555905 A0A1W2PQH9 124 aa11.54□□□□□ -0.56
TMEM260-208ENST00000555905 DPYSL4O14531 572 aa11.54□□□□□ -0.56
TMEM260-208ENST00000555905 SPOPO43791 374 aa11.54□□□□□ -0.56
TMEM260-208ENST00000555905 XYLBO75191 536 aa11.54□□□□□ -0.56
TMEM260-208ENST00000555905 ZMYND10O75800 440 aa11.54□□□□□ -0.56
TMEM260-208ENST00000555905 RNF8O76064 485 aa11.54□□□□□ -0.56
TMEM260-208ENST00000555905 HNRNPA1P09651 372 aaKnown RBP eCLIP11.54□□□□□ -0.56
TMEM260-208ENST00000555905 RALAP11233 206 aa11.54□□□□□ -0.56
TMEM260-208ENST00000555905 NCAM1P13591 858 aa11.54□□□□□ -0.56
TMEM260-208ENST00000555905 HOXA9P31269 272 aa11.54□□□□□ -0.56
TMEM260-208ENST00000555905 MAN1A1P33908 653 aa11.54□□□□□ -0.56
TMEM260-208ENST00000555905 NOS2P35228 1153 aa11.54□□□□□ -0.56
TMEM260-208ENST00000555905 FLT3P36888 993 aa11.54□□□□□ -0.56
TMEM260-208ENST00000555905 MATKP42679 507 aa11.54□□□□□ -0.56
TMEM260-208ENST00000555905 SLC1A1P43005 524 aa11.54□□□□□ -0.56
TMEM260-208ENST00000555905 PPP3CCP48454 512 aa11.54□□□□□ -0.56
TMEM260-208ENST00000555905 ETF1P62495 437 aaKnown RBP11.54□□□□□ -0.56
TMEM260-208ENST00000555905 ACAP1Q15027 740 aa11.54□□□□□ -0.56
TMEM260-208ENST00000555905 DCAF6Q58WW2 860 aa11.54□□□□□ -0.56
TMEM260-208ENST00000555905 HFE2Q6ZVN8 426 aa11.54□□□□□ -0.56
TMEM260-208ENST00000555905 BEND5Q7L4P6 421 aa11.54□□□□□ -0.56
TMEM260-208ENST00000555905 BHLHA9Q7RTU4 235 aa11.54□□□□□ -0.56
TMEM260-208ENST00000555905 PEX26Q7Z412 305 aa11.54□□□□□ -0.56
TMEM260-208ENST00000555905 SLFN11Q7Z7L1 901 aa11.54□□□□□ -0.56
TMEM260-208ENST00000555905 DEFB106AQ8N104 65 aa11.54□□□□□ -0.56
TMEM260-208ENST00000555905 SLC35F6Q8N357 371 aa11.54□□□□□ -0.56
TMEM260-208ENST00000555905 NIPA2Q8N8Q9 360 aa11.54□□□□□ -0.56
TMEM260-208ENST00000555905 LRRC57Q8N9N7 239 aa11.54□□□□□ -0.56
TMEM260-208ENST00000555905 RNF139Q8WU17 664 aa11.54□□□□□ -0.56
TMEM260-208ENST00000555905 UBE2Q2Q8WVN8 375 aa11.54□□□□□ -0.56
TMEM260-208ENST00000555905 SLC2A13Q96QE2 648 aa11.54□□□□□ -0.56
TMEM260-208ENST00000555905 NCAPGQ9BPX3 1015 aa11.54□□□□□ -0.56
TMEM260-208ENST00000555905 DDX23Q9BUQ8 820 aaKnown RBP11.54□□□□□ -0.56
TMEM260-208ENST00000555905 PRDM12Q9H4Q4 367 aa11.54□□□□□ -0.56
TMEM260-208ENST00000555905 ZDHHC7Q9NXF8 308 aa11.54□□□□□ -0.56
TMEM260-208ENST00000555905 RRN3Q9NYV6 651 aa11.54□□□□□ -0.56
TMEM260-208ENST00000555905 LMCD1Q9NZU5 365 aa11.54□□□□□ -0.56
TMEM260-208ENST00000555905 AMFRQ9UKV5 643 aa11.54□□□□□ -0.56
TMEM260-208ENST00000555905 HCFC2Q9Y5Z7 792 aa11.54□□□□□ -0.56
TMEM260-208ENST00000555905 CCL16O15467 120 aa11.53□□□□□ -0.56
TMEM260-208ENST00000555905 FTCDO95954 541 aa11.53□□□□□ -0.56
TMEM260-208ENST00000555905 SRGAP2BP0DMP2 458 aa11.53□□□□□ -0.56
TMEM260-208ENST00000555905 TNNT1P13805 278 aa11.53□□□□□ -0.56
TMEM260-208ENST00000555905 HMGA1P17096 107 aaKnown RBP11.53□□□□□ -0.56
TMEM260-208ENST00000555905 COMTP21964 271 aa11.53□□□□□ -0.56
TMEM260-208ENST00000555905 CASQ1P31415 396 aa11.53□□□□□ -0.56
TMEM260-208ENST00000555905 SSR1P43307 286 aaKnown RBP11.53□□□□□ -0.56
TMEM260-208ENST00000555905 PTPN9P43378 593 aa11.53□□□□□ -0.56
TMEM260-208ENST00000555905 OGDHQ02218 1023 aa11.53□□□□□ -0.56
TMEM260-208ENST00000555905 SLC25A52Q3SY17 297 aa11.53□□□□□ -0.56
TMEM260-208ENST00000555905 CCDC14Q49A88 953 aa11.53□□□□□ -0.56
TMEM260-208ENST00000555905 PABPC1LQ4VXU2 614 aaKnown RBP11.53□□□□□ -0.56
TMEM260-208ENST00000555905 ZNF697Q5TEC3 545 aa11.53□□□□□ -0.56
TMEM260-208ENST00000555905 RSRC2Q7L4I2 434 aaKnown RBP11.53□□□□□ -0.56
TMEM260-208ENST00000555905 SCD5Q86SK9 330 aa11.53□□□□□ -0.56
TMEM260-208ENST00000555905 TADA2BQ86TJ2 420 aa11.53□□□□□ -0.56
TMEM260-208ENST00000555905 EDEM1Q92611 657 aa11.53□□□□□ -0.56
TMEM260-208ENST00000555905 CASP10Q92851 521 aa11.53□□□□□ -0.56
TMEM260-208ENST00000555905 CFAP57Q96MR6 1250 aa11.53□□□□□ -0.56
TMEM260-208ENST00000555905 GCNAQ96QF7 691 aa11.53□□□□□ -0.56
TMEM260-208ENST00000555905 CDK5RAP1Q96SZ6 601 aaKnown RBP11.53□□□□□ -0.56
TMEM260-208ENST00000555905 IGFLR1Q9H665 355 aa11.53□□□□□ -0.56
TMEM260-208ENST00000555905 OLA1Q9NTK5 396 aaKnown RBP11.53□□□□□ -0.56
TMEM260-208ENST00000555905 DZANK1Q9NVP4 752 aa11.53□□□□□ -0.56
TMEM260-208ENST00000555905 CLIC5Q9NZA1 410 aa11.53□□□□□ -0.56
TMEM260-208ENST00000555905 TRPM5Q9NZQ8 1165 aa11.53□□□□□ -0.56
TMEM260-208ENST00000555905 DNAI1Q9UI46 699 aa11.53□□□□□ -0.56
TMEM260-208ENST00000555905 NAALADL1Q9UQQ1 740 aa11.53□□□□□ -0.56
TMEM260-208ENST00000555905 USTQ9Y2C2 406 aa11.53□□□□□ -0.56
TMEM260-208ENST00000555905 JRKLQ9Y4A0 524 aa11.53□□□□□ -0.56
TMEM260-208ENST00000555905 ALG6Q9Y672 507 aa11.53□□□□□ -0.56
TMEM260-208ENST00000555905 MYO7AQ13402 2215 aa11.53□□□□□ -0.56
TMEM260-208ENST00000555905 MYO9BQ13459 2157 aa11.52□□□□□ -0.56
TMEM260-208ENST00000555905 CTAGE9A4FU28 777 aa11.52□□□□□ -0.57
TMEM260-208ENST00000555905 RFPL2O75678 378 aa11.52□□□□□ -0.57
TMEM260-208ENST00000555905 FGF19O95750 216 aa11.52□□□□□ -0.57
TMEM260-208ENST00000555905 FYNP06241 537 aa11.52□□□□□ -0.57
TMEM260-208ENST00000555905 POU2F2P09086 479 aa11.52□□□□□ -0.57
TMEM260-208ENST00000555905 ZDHHC11BP0C7U3 371 aa11.52□□□□□ -0.57
TMEM260-208ENST00000555905 GBP1P32455 592 aa11.52□□□□□ -0.57
TMEM260-208ENST00000555905 SULT1E1P49888 294 aa11.52□□□□□ -0.57
TMEM260-208ENST00000555905 ATP11AP98196 1134 aa11.52□□□□□ -0.57
TMEM260-208ENST00000555905 ZNF252P-AS1Q0IIN9 211 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms