RNA–Protein interactions for RNA: ENST00000555709.6

MTHFD1-211, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-211ENST00000555709 SMARCD1Q96GM5 515 aa12.36□□□□□ -0.43
MTHFD1-211ENST00000555709 FUBP3Q96I24 572 aaKnown RBP eCLIP12.36□□□□□ -0.43
MTHFD1-211ENST00000555709 DUSP16Q9BY84 665 aa12.36□□□□□ -0.43
MTHFD1-211ENST00000555709 PDCL3Q9H2J4 239 aa12.36□□□□□ -0.43
MTHFD1-211ENST00000555709 CSNK1G1Q9HCP0 422 aa12.36□□□□□ -0.43
MTHFD1-211ENST00000555709 ABCB6Q9NP58 842 aa12.36□□□□□ -0.43
MTHFD1-211ENST00000555709 LTB4R2Q9NPC1 389 aa12.36□□□□□ -0.43
MTHFD1-211ENST00000555709 SEPT11Q9NVA2 429 aaKnown RBP12.36□□□□□ -0.43
MTHFD1-211ENST00000555709 HESX1Q9UBX0 185 aa12.36□□□□□ -0.43
MTHFD1-211ENST00000555709 LOC400499M0QZD8 3231 aa12.35□□□□□ -0.43
MTHFD1-211ENST00000555709 SMG1Q96Q15 3661 aaKnown RBP12.35□□□□□ -0.43
MTHFD1-211ENST00000555709 AKAP13Q12802 2813 aa12.35□□□□□ -0.43
MTHFD1-211ENST00000555709 SPDYE4A6NLX3 237 aa12.35□□□□□ -0.43
MTHFD1-211ENST00000555709 SRRM3A6NNA2 597 aaPredicted RBP12.35□□□□□ -0.43
MTHFD1-211ENST00000555709 TAF4O00268 1085 aa12.35□□□□□ -0.43
MTHFD1-211ENST00000555709 TULP2O00295 520 aa12.35□□□□□ -0.43
MTHFD1-211ENST00000555709 TEX28O15482 410 aa12.35□□□□□ -0.43
MTHFD1-211ENST00000555709 ABLIM3O94929 683 aa12.35□□□□□ -0.43
MTHFD1-211ENST00000555709 ZIC2O95409 532 aaPredicted RBP12.35□□□□□ -0.43
MTHFD1-211ENST00000555709 MMP8P22894 467 aa12.35□□□□□ -0.43
MTHFD1-211ENST00000555709 PLA2G4AP47712 749 aa12.35□□□□□ -0.43
MTHFD1-211ENST00000555709 RPL34P49207 117 aaKnown RBP12.35□□□□□ -0.43
MTHFD1-211ENST00000555709 CDR1P51861 262 aa12.35□□□□□ -0.43
MTHFD1-211ENST00000555709 LIMK1P53667 647 aa12.35□□□□□ -0.43
MTHFD1-211ENST00000555709 PDE4CQ08493 712 aa12.35□□□□□ -0.43
MTHFD1-211ENST00000555709 PTP4A2Q12974 167 aa12.35□□□□□ -0.43
MTHFD1-211ENST00000555709 RAB33AQ14088 237 aa12.35□□□□□ -0.43
MTHFD1-211ENST00000555709 UBXN2BQ14CS0 331 aa12.35□□□□□ -0.43
MTHFD1-211ENST00000555709 MLF2Q15773 248 aaPredicted RBP12.35□□□□□ -0.43
MTHFD1-211ENST00000555709 PTPN20Q4JDL3 420 aa12.35□□□□□ -0.43
MTHFD1-211ENST00000555709 RNF19BQ6ZMZ0 732 aa12.35□□□□□ -0.43
MTHFD1-211ENST00000555709 MON1BQ7L1V2 547 aa12.35□□□□□ -0.43
MTHFD1-211ENST00000555709 PHF13Q86YI8 300 aaPredicted RBP12.35□□□□□ -0.43
MTHFD1-211ENST00000555709 SPATA2LQ8IUW3 424 aaPredicted RBP12.35□□□□□ -0.43
MTHFD1-211ENST00000555709 TTC9BQ8N6N2 239 aa12.35□□□□□ -0.43
MTHFD1-211ENST00000555709 CELF5Q8N6W0 485 aaKnown RBP12.35□□□□□ -0.43
MTHFD1-211ENST00000555709 UBA3Q8TBC4 463 aa12.35□□□□□ -0.43
MTHFD1-211ENST00000555709 STK32AQ8WU08 396 aa12.35□□□□□ -0.43
MTHFD1-211ENST00000555709 SLC35F5Q8WV83 523 aa12.35□□□□□ -0.43
MTHFD1-211ENST00000555709 ZNF707Q96C28 371 aaPredicted RBP12.35□□□□□ -0.43
MTHFD1-211ENST00000555709 SMOQ99835 787 aa12.35□□□□□ -0.43
MTHFD1-211ENST00000555709 MED10Q9BTT4 135 aa12.35□□□□□ -0.43
MTHFD1-211ENST00000555709 ISCUQ9H1K1 167 aa12.35□□□□□ -0.43
MTHFD1-211ENST00000555709 CRISPLD1Q9H336 500 aa12.35□□□□□ -0.43
MTHFD1-211ENST00000555709 ABI2Q9NYB9 513 aaPredicted RBP12.35□□□□□ -0.43
MTHFD1-211ENST00000555709 LHX6Q9UPM6 363 aa12.35□□□□□ -0.43
MTHFD1-211ENST00000555709 CEP83Q9Y592 693 aa12.35□□□□□ -0.43
MTHFD1-211ENST00000555709 PCDHB5Q9Y5E4 795 aa12.35□□□□□ -0.43
MTHFD1-211ENST00000555709 ADGRG1Q9Y653 693 aa12.35□□□□□ -0.43
MTHFD1-211ENST00000555709 GREB1Q4ZG55 1949 aa12.35□□□□□ -0.43
MTHFD1-211ENST00000555709 CCDC195A0A1B0GUA6 201 aa12.34□□□□□ -0.43
MTHFD1-211ENST00000555709 XPO1O14980 1071 aaKnown RBP12.34□□□□□ -0.43
MTHFD1-211ENST00000555709 AP1G2O75843 785 aa12.34□□□□□ -0.43
MTHFD1-211ENST00000555709 BEST1O76090 585 aa12.34□□□□□ -0.43
MTHFD1-211ENST00000555709 BDNFP23560 247 aa12.34□□□□□ -0.43
MTHFD1-211ENST00000555709 CYP2F1P24903 491 aa12.34□□□□□ -0.43
MTHFD1-211ENST00000555709 KLRC2P26717 231 aa12.34□□□□□ -0.43
MTHFD1-211ENST00000555709 MAGEA11P43364 429 aa12.34□□□□□ -0.43
MTHFD1-211ENST00000555709 NSFP46459 744 aaKnown RBP12.34□□□□□ -0.43
MTHFD1-211ENST00000555709 RPS9P46781 194 aaKnown RBP12.34□□□□□ -0.43
MTHFD1-211ENST00000555709 ARPP19P56211 112 aa12.34□□□□□ -0.43
MTHFD1-211ENST00000555709 FZD5Q13467 585 aa12.34□□□□□ -0.43
MTHFD1-211ENST00000555709 SLC44A4Q53GD3 710 aa12.34□□□□□ -0.43
MTHFD1-211ENST00000555709 CCDC122Q5T0U0 273 aa12.34□□□□□ -0.43
MTHFD1-211ENST00000555709 TPGS2Q68CL5 300 aa12.34□□□□□ -0.43
MTHFD1-211ENST00000555709 IL31Q6EBC2 164 aa12.34□□□□□ -0.43
MTHFD1-211ENST00000555709 ACAD10Q6JQN1 1059 aa12.34□□□□□ -0.43
MTHFD1-211ENST00000555709 PPP1R2P3Q6NXS1 205 aa12.34□□□□□ -0.43
MTHFD1-211ENST00000555709 PMF1Q6P1K2 205 aa12.34□□□□□ -0.43
MTHFD1-211ENST00000555709 VSTM1Q6UX27 236 aa12.34□□□□□ -0.43
MTHFD1-211ENST00000555709 DNAAF5Q86Y56 855 aa12.34□□□□□ -0.43
MTHFD1-211ENST00000555709 ATAD1Q8NBU5 361 aa12.34□□□□□ -0.43
MTHFD1-211ENST00000555709 ZNF461Q8TAF7 563 aa12.34□□□□□ -0.43
MTHFD1-211ENST00000555709 SPPL2BQ8TCT7 592 aa12.34□□□□□ -0.43
MTHFD1-211ENST00000555709 CPA5Q8WXQ8 436 aa12.34□□□□□ -0.43
MTHFD1-211ENST00000555709 TRIM44Q96DX7 344 aaPredicted RBP12.34□□□□□ -0.43
MTHFD1-211ENST00000555709 PGLYRP2Q96PD5 576 aa12.34□□□□□ -0.43
MTHFD1-211ENST00000555709 CPXM1Q96SM3 734 aa12.34□□□□□ -0.43
MTHFD1-211ENST00000555709 SLC4A5Q9BY07 1137 aa12.34□□□□□ -0.43
MTHFD1-211ENST00000555709 PACSIN1Q9BY11 444 aa12.34□□□□□ -0.43
MTHFD1-211ENST00000555709 DMAP1Q9NPF5 467 aaPredicted RBP12.34□□□□□ -0.43
MTHFD1-211ENST00000555709 MAN1C1Q9NR34 630 aa12.34□□□□□ -0.43
MTHFD1-211ENST00000555709 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.34□□□□□ -0.43
MTHFD1-211ENST00000555709 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.34□□□□□ -0.43
MTHFD1-211ENST00000555709 HSFX1Q9UBD0 423 aa12.34□□□□□ -0.43
MTHFD1-211ENST00000555709 AFF4Q9UHB7 1163 aaKnown RBP12.34□□□□□ -0.43
MTHFD1-211ENST00000555709 RAB23Q9ULC3 237 aa12.34□□□□□ -0.43
MTHFD1-211ENST00000555709 NCANO14594 1321 aa12.34□□□□□ -0.43
MTHFD1-211ENST00000555709 MTCL1Q9Y4B5 1905 aaKnown RBP12.33□□□□□ -0.44
MTHFD1-211ENST00000555709 FAM170AA1A519 330 aa12.33□□□□□ -0.44
MTHFD1-211ENST00000555709 TMCO5BA8MYB1 307 aa12.33□□□□□ -0.44
MTHFD1-211ENST00000555709 HHLA1C9JL84 531 aa12.33□□□□□ -0.44
MTHFD1-211ENST00000555709 RTN2O75298 545 aa12.33□□□□□ -0.44
MTHFD1-211ENST00000555709 RFPL2O75678 378 aa12.33□□□□□ -0.44
MTHFD1-211ENST00000555709 GABBR2O75899 941 aa12.33□□□□□ -0.44
MTHFD1-211ENST00000555709 IPO7O95373 1038 aaKnown RBP12.33□□□□□ -0.44
MTHFD1-211ENST00000555709 ADH1AP07327 375 aa12.33□□□□□ -0.44
MTHFD1-211ENST00000555709 CCDC175P0C221 793 aa12.33□□□□□ -0.44
MTHFD1-211ENST00000555709 ATF2P15336 505 aa12.33□□□□□ -0.44
MTHFD1-211ENST00000555709 CD72P21854 359 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms