RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 HOXC11O43248 304 aaPredicted RBP16.25■□□□□ 0.19
SNX6-205ENST00000555648 PPP1R2P41236 205 aa16.25■□□□□ 0.19
SNX6-205ENST00000555648 KIF11P52732 1056 aa16.25■□□□□ 0.19
SNX6-205ENST00000555648 CCDC6Q16204 474 aa16.25■□□□□ 0.19
SNX6-205ENST00000555648 CRY1Q16526 586 aa16.25■□□□□ 0.19
SNX6-205ENST00000555648 PLK5Q496M5 336 aa16.25■□□□□ 0.19
SNX6-205ENST00000555648 COBLL1Q53SF7 1204 aa16.25■□□□□ 0.19
SNX6-205ENST00000555648 PPP1R26Q5T8A7 1209 aaPredicted RBP16.25■□□□□ 0.19
SNX6-205ENST00000555648 ANKRD40Q6AI12 368 aa16.25■□□□□ 0.19
SNX6-205ENST00000555648 HTR3DQ70Z44 454 aa16.25■□□□□ 0.19
SNX6-205ENST00000555648 C12orf40Q86WS4 652 aa16.25■□□□□ 0.19
SNX6-205ENST00000555648 PGBD3Q8N328 593 aa16.25■□□□□ 0.19
SNX6-205ENST00000555648 ARHGAP18Q8N392 663 aa16.25■□□□□ 0.19
SNX6-205ENST00000555648 ALLCQ8N6M5 410 aa16.25■□□□□ 0.19
SNX6-205ENST00000555648 SEMA4DQ92854 862 aa16.25■□□□□ 0.19
SNX6-205ENST00000555648 ZC3H10Q96K80 434 aaKnown RBP16.25■□□□□ 0.19
SNX6-205ENST00000555648 CNOT6LQ96LI5 555 aaKnown RBP16.25■□□□□ 0.19
SNX6-205ENST00000555648 TIGD1Q96MW7 591 aa16.25■□□□□ 0.19
SNX6-205ENST00000555648 DUSP9Q99956 384 aaKnown RBP16.25■□□□□ 0.19
SNX6-205ENST00000555648 BBS2Q9BXC9 721 aa16.25■□□□□ 0.19
SNX6-205ENST00000555648 KLF16Q9BXK1 252 aaPredicted RBP16.25■□□□□ 0.19
SNX6-205ENST00000555648 TPSD1Q9BZJ3 242 aa16.25■□□□□ 0.19
SNX6-205ENST00000555648 FAM124BQ9H5Z6 455 aaPredicted RBP16.25■□□□□ 0.19
SNX6-205ENST00000555648 METTL14Q9HCE5 456 aaKnown RBP16.25■□□□□ 0.19
SNX6-205ENST00000555648 WDR35Q9P2L0 1181 aa16.25■□□□□ 0.19
SNX6-205ENST00000555648 KIF26AQ9ULI4 1882 aaPredicted RBP16.25■□□□□ 0.19
SNX6-205ENST00000555648 DENND4CQ5VZ89 1909 aa16.24■□□□□ 0.19
SNX6-205ENST00000555648 HHLA1C9JL84 531 aa16.24■□□□□ 0.19
SNX6-205ENST00000555648 NEDD8-MDP1E9PL57 170 aa16.24■□□□□ 0.19
SNX6-205ENST00000555648 SLC30A4O14863 429 aa16.24■□□□□ 0.19
SNX6-205ENST00000555648 DCLK1O15075 740 aa16.24■□□□□ 0.19
SNX6-205ENST00000555648 TULP3O75386 442 aa16.24■□□□□ 0.19
SNX6-205ENST00000555648 ZNF806P0C7X5 589 aa16.24■□□□□ 0.19
SNX6-205ENST00000555648 KCNA4P22459 653 aa16.24■□□□□ 0.19
SNX6-205ENST00000555648 MPLP40238 635 aa16.24■□□□□ 0.19
SNX6-205ENST00000555648 CREB5Q02930 508 aa16.24■□□□□ 0.19
SNX6-205ENST00000555648 CETN1Q12798 172 aa16.24■□□□□ 0.19
SNX6-205ENST00000555648 CCDC40Q4G0X9 1142 aa16.24■□□□□ 0.19
SNX6-205ENST00000555648 C10orf76Q5T2E6 689 aa16.24■□□□□ 0.19
SNX6-205ENST00000555648 GRAMD4Q6IC98 578 aa16.24■□□□□ 0.19
SNX6-205ENST00000555648 SDE2Q6IQ49 451 aa16.24■□□□□ 0.19
SNX6-205ENST00000555648 KLHDC10Q6PID8 442 aa16.24■□□□□ 0.19
SNX6-205ENST00000555648 TPGS1Q6ZTW0 290 aa16.24■□□□□ 0.19
SNX6-205ENST00000555648 RSRC2Q7L4I2 434 aaKnown RBP16.24■□□□□ 0.19
SNX6-205ENST00000555648 CCDC186Q7Z3E2 898 aa16.24■□□□□ 0.19
SNX6-205ENST00000555648 TMEM25Q86YD3 366 aa16.24■□□□□ 0.19
SNX6-205ENST00000555648 MIB1Q86YT6 1006 aa16.24■□□□□ 0.19
SNX6-205ENST00000555648 ERCC4Q92889 916 aaPredicted RBP16.24■□□□□ 0.19
SNX6-205ENST00000555648 SPACA7Q96KW9 195 aa16.24■□□□□ 0.19
SNX6-205ENST00000555648 VPS45Q9NRW7 570 aa16.24■□□□□ 0.19
SNX6-205ENST00000555648 DNAJC17Q9NVM6 304 aaKnown RBP16.24■□□□□ 0.19
SNX6-205ENST00000555648 HESX1Q9UBX0 185 aa16.24■□□□□ 0.19
SNX6-205ENST00000555648 NUDT5Q9UKK9 219 aa16.24■□□□□ 0.19
SNX6-205ENST00000555648 STRIP2Q9ULQ0 834 aa16.24■□□□□ 0.19
SNX6-205ENST00000555648 INVSQ9Y283 1065 aa16.24■□□□□ 0.19
SNX6-205ENST00000555648 OBSL1O75147 1896 aa16.24■□□□□ 0.19
SNX6-205ENST00000555648 A0A0A0MRY4 1105 aa16.23■□□□□ 0.19
SNX6-205ENST00000555648 MAP3K13O43283 966 aa16.23■□□□□ 0.19
SNX6-205ENST00000555648 CD19P15391 556 aa16.23■□□□□ 0.19
SNX6-205ENST00000555648 PGFP49763 221 aa16.23■□□□□ 0.19
SNX6-205ENST00000555648 RAD23BP54727 409 aa16.23■□□□□ 0.19
SNX6-205ENST00000555648 COG7P83436 770 aa16.23■□□□□ 0.19
SNX6-205ENST00000555648 CUL2Q13617 745 aa16.23■□□□□ 0.19
SNX6-205ENST00000555648 BYSLQ13895 437 aaKnown RBP16.23■□□□□ 0.19
SNX6-205ENST00000555648 SF3A2Q15428 464 aaKnown RBP16.23■□□□□ 0.19
SNX6-205ENST00000555648 CBWD6Q4V339 395 aa16.23■□□□□ 0.19
SNX6-205ENST00000555648 CBWD3Q5JTY5 395 aa16.23■□□□□ 0.19
SNX6-205ENST00000555648 CBWD5Q5RIA9 395 aa16.23■□□□□ 0.19
SNX6-205ENST00000555648 EMC10Q5UCC4 262 aa16.23■□□□□ 0.19
SNX6-205ENST00000555648 ARHGAP17Q68EM7 881 aa16.23■□□□□ 0.19
SNX6-205ENST00000555648 ISM2Q6H9L7 571 aa16.23■□□□□ 0.19
SNX6-205ENST00000555648 ZNF513Q8N8E2 541 aaPredicted RBP16.23■□□□□ 0.19
SNX6-205ENST00000555648 IL17RCQ8NAC3 791 aa16.23■□□□□ 0.19
SNX6-205ENST00000555648 SLC4A11Q8NBS3 891 aa16.23■□□□□ 0.19
SNX6-205ENST00000555648 ENGASEQ8NFI3 743 aa16.23■□□□□ 0.19
SNX6-205ENST00000555648 KCNV2Q8TDN2 545 aa16.23■□□□□ 0.19
SNX6-205ENST00000555648 DDX1Q92499 740 aaKnown RBP16.23■□□□□ 0.19
SNX6-205ENST00000555648 TATDN2Q93075 761 aa16.23■□□□□ 0.19
SNX6-205ENST00000555648 DHTKD1Q96HY7 919 aaPredicted RBP16.23■□□□□ 0.19
SNX6-205ENST00000555648 NMUR1Q9HB89 426 aa16.23■□□□□ 0.19
SNX6-205ENST00000555648 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.23■□□□□ 0.19
SNX6-205ENST00000555648 OSER1Q9NX31 292 aa16.23■□□□□ 0.19
SNX6-205ENST00000555648 CLIC5Q9NZA1 410 aa16.23■□□□□ 0.19
SNX6-205ENST00000555648 RASAL2Q9UJF2 1139 aa16.23■□□□□ 0.19
SNX6-205ENST00000555648 ZNF510Q9Y2H8 683 aa16.23■□□□□ 0.19
SNX6-205ENST00000555648 CFAP54Q96N23 3096 aa16.22■□□□□ 0.19
SNX6-205ENST00000555648 TRIM49BA6NDI0 452 aa16.22■□□□□ 0.19
SNX6-205ENST00000555648 SGK1O00141 431 aa16.22■□□□□ 0.19
SNX6-205ENST00000555648 MDM4O15151 490 aa16.22■□□□□ 0.19
SNX6-205ENST00000555648 TBXAS1P24557 533 aaPredicted RBP16.22■□□□□ 0.19
SNX6-205ENST00000555648 LRMPQ12912 555 aa16.22■□□□□ 0.19
SNX6-205ENST00000555648 SGO2Q562F6 1265 aa16.22■□□□□ 0.19
SNX6-205ENST00000555648 KLHL10Q6JEL2 608 aa16.22■□□□□ 0.19
SNX6-205ENST00000555648 PIGZQ86VD9 579 aa16.22■□□□□ 0.19
SNX6-205ENST00000555648 RASSF3Q86WH2 238 aa16.22■□□□□ 0.19
SNX6-205ENST00000555648 SFTPA1Q8IWL2 248 aa16.22■□□□□ 0.19
SNX6-205ENST00000555648 ETFBKMTQ8IXQ9 262 aa16.22■□□□□ 0.19
SNX6-205ENST00000555648 TERB1Q8NA31 727 aa16.22■□□□□ 0.19
SNX6-205ENST00000555648 ANKRD52Q8NB46 1076 aa16.22■□□□□ 0.19
SNX6-205ENST00000555648 MDGA1Q8NFP4 955 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms