RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 SH3BP1Q9Y3L3 701 aa14.42□□□□□ -0.1
SHMT2-219ENST00000555563 E2F8A0AVK6 867 aa14.41□□□□□ -0.1
SHMT2-219ENST00000555563 SLC9A3R1O14745 358 aaPredicted RBP14.41□□□□□ -0.1
SHMT2-219ENST00000555563 GFRA3O60609 400 aa14.41□□□□□ -0.1
SHMT2-219ENST00000555563 RALAP11233 206 aa14.41□□□□□ -0.1
SHMT2-219ENST00000555563 GNA15P30679 374 aa14.41□□□□□ -0.1
SHMT2-219ENST00000555563 USP8P40818 1118 aa14.41□□□□□ -0.1
SHMT2-219ENST00000555563 RGS7P49802 495 aa14.41□□□□□ -0.1
SHMT2-219ENST00000555563 YWHAGP61981 247 aaKnown RBP eCLIP14.41□□□□□ -0.1
SHMT2-219ENST00000555563 KCNMA1Q12791 1236 aa14.41□□□□□ -0.1
SHMT2-219ENST00000555563 MTAPQ13126 283 aa14.41□□□□□ -0.1
SHMT2-219ENST00000555563 CCINQ13939 588 aa14.41□□□□□ -0.1
SHMT2-219ENST00000555563 LRRC32Q14392 662 aa14.41□□□□□ -0.1
SHMT2-219ENST00000555563 TMEM196Q5HYL7 178 aa14.41□□□□□ -0.1
SHMT2-219ENST00000555563 PM20D1Q6GTS8 502 aa14.41□□□□□ -0.1
SHMT2-219ENST00000555563 FSTL4Q6MZW2 842 aa14.41□□□□□ -0.1
SHMT2-219ENST00000555563 PMF1Q6P1K2 205 aa14.41□□□□□ -0.1
SHMT2-219ENST00000555563 Q6ZS52 159 aa14.41□□□□□ -0.1
SHMT2-219ENST00000555563 BBS7Q8IWZ6 715 aa14.41□□□□□ -0.1
SHMT2-219ENST00000555563 MAML2Q8IZL2 1156 aaPredicted RBP14.41□□□□□ -0.1
SHMT2-219ENST00000555563 ARHGAP18Q8N392 663 aa14.41□□□□□ -0.1
SHMT2-219ENST00000555563 SLC35F5Q8WV83 523 aa14.41□□□□□ -0.1
SHMT2-219ENST00000555563 DNMT3LQ9UJW3 386 aa14.41□□□□□ -0.1
SHMT2-219ENST00000555563 PIK3R2O00459 728 aa14.4□□□□□ -0.1
SHMT2-219ENST00000555563 TRDMT1O14717 391 aaKnown RBP14.4□□□□□ -0.1
SHMT2-219ENST00000555563 THAP12O43422 761 aa14.4□□□□□ -0.1
SHMT2-219ENST00000555563 GREM1O60565 184 aa14.4□□□□□ -0.1
SHMT2-219ENST00000555563 LETM1O95202 739 aaPredicted RBP14.4□□□□□ -0.1
SHMT2-219ENST00000555563 PNMA6AP0CW24 399 aaPredicted RBP14.4□□□□□ -0.1
SHMT2-219ENST00000555563 LCP1P13796 627 aa14.4□□□□□ -0.1
SHMT2-219ENST00000555563 AMPD2Q01433 879 aa14.4□□□□□ -0.1
SHMT2-219ENST00000555563 GOLGA8FQ08AF8 430 aa14.4□□□□□ -0.1
SHMT2-219ENST00000555563 GOLGA8DPQ0D2H9 430 aa14.4□□□□□ -0.1
SHMT2-219ENST00000555563 GAS6Q14393 721 aa14.4□□□□□ -0.1
SHMT2-219ENST00000555563 NCAPHQ15003 741 aa14.4□□□□□ -0.1
SHMT2-219ENST00000555563 GAB4Q2WGN9 574 aa14.4□□□□□ -0.1
SHMT2-219ENST00000555563 DENND1BQ6P3S1 775 aa14.4□□□□□ -0.1
SHMT2-219ENST00000555563 RSRC2Q7L4I2 434 aaKnown RBP14.4□□□□□ -0.1
SHMT2-219ENST00000555563 TADA2BQ86TJ2 420 aa14.4□□□□□ -0.1
SHMT2-219ENST00000555563 MIB1Q86YT6 1006 aa14.4□□□□□ -0.1
SHMT2-219ENST00000555563 ZNF276Q8N554 614 aa14.4□□□□□ -0.1
SHMT2-219ENST00000555563 CDK5RAP1Q96SZ6 601 aaKnown RBP14.4□□□□□ -0.1
SHMT2-219ENST00000555563 P2RY13Q9BPV8 354 aa14.4□□□□□ -0.1
SHMT2-219ENST00000555563 IER2Q9BTL4 223 aa14.4□□□□□ -0.1
SHMT2-219ENST00000555563 LSM14BQ9BX40 385 aaKnown RBP14.4□□□□□ -0.1
SHMT2-219ENST00000555563 VPS16Q9H269 839 aa14.4□□□□□ -0.1
SHMT2-219ENST00000555563 FBRSL1Q9HCM7 1045 aaKnown RBP14.4□□□□□ -0.1
SHMT2-219ENST00000555563 CNGB3Q9NQW8 809 aa14.4□□□□□ -0.1
SHMT2-219ENST00000555563 TBC1D14Q9P2M4 693 aa14.4□□□□□ -0.1
SHMT2-219ENST00000555563 RASAL2Q9UJF2 1139 aa14.4□□□□□ -0.1
SHMT2-219ENST00000555563 FHOD1Q9Y613 1164 aa14.4□□□□□ -0.1
SHMT2-219ENST00000555563 YJEFN3A6XGL0 299 aa14.39□□□□□ -0.11
SHMT2-219ENST00000555563 E7ENQ6 273 aa14.39□□□□□ -0.11
SHMT2-219ENST00000555563 LAMTOR5O43504 91 aa14.39□□□□□ -0.11
SHMT2-219ENST00000555563 MED7O43513 233 aa14.39□□□□□ -0.11
SHMT2-219ENST00000555563 DAOAP59103 153 aa14.39□□□□□ -0.11
SHMT2-219ENST00000555563 EFEMP1Q12805 493 aa14.39□□□□□ -0.11
SHMT2-219ENST00000555563 GRSF1Q12849 480 aaKnown RBP eCLIP14.39□□□□□ -0.11
SHMT2-219ENST00000555563 NR1H3Q13133 447 aa14.39□□□□□ -0.11
SHMT2-219ENST00000555563 DHCR24Q15392 516 aa14.39□□□□□ -0.11
SHMT2-219ENST00000555563 MEA1Q16626 185 aa14.39□□□□□ -0.11
SHMT2-219ENST00000555563 KLHL40Q2TBA0 621 aa14.39□□□□□ -0.11
SHMT2-219ENST00000555563 ANO6Q4KMQ2 910 aa14.39□□□□□ -0.11
SHMT2-219ENST00000555563 DGKKQ5KSL6 1271 aa14.39□□□□□ -0.11
SHMT2-219ENST00000555563 ADGRG2Q8IZP9 1017 aa14.39□□□□□ -0.11
SHMT2-219ENST00000555563 SCML4Q8N228 414 aa14.39□□□□□ -0.11
SHMT2-219ENST00000555563 AOPEPQ8N6M6 819 aa14.39□□□□□ -0.11
SHMT2-219ENST00000555563 ZNF606Q8WXB4 792 aa14.39□□□□□ -0.11
SHMT2-219ENST00000555563 OTUB2Q96DC9 234 aa14.39□□□□□ -0.11
SHMT2-219ENST00000555563 HSD3B7Q9H2F3 369 aa14.39□□□□□ -0.11
SHMT2-219ENST00000555563 PRMT8Q9NR22 394 aaPredicted RBP14.39□□□□□ -0.11
SHMT2-219ENST00000555563 KIAA1549LQ6ZVL6 1849 aa14.38□□□□□ -0.11
SHMT2-219ENST00000555563 FOXN3O00409 490 aaPredicted RBP14.38□□□□□ -0.11
SHMT2-219ENST00000555563 STC2O76061 302 aa14.38□□□□□ -0.11
SHMT2-219ENST00000555563 ADH1CP00326 375 aa14.38□□□□□ -0.11
SHMT2-219ENST00000555563 EGFP01133 1207 aa14.38□□□□□ -0.11
SHMT2-219ENST00000555563 TPM2P07951 284 aa14.38□□□□□ -0.11
SHMT2-219ENST00000555563 SP9P0CG40 484 aa14.38□□□□□ -0.11
SHMT2-219ENST00000555563 ADH5P11766 374 aa14.38□□□□□ -0.11
SHMT2-219ENST00000555563 ZNF18P17022 549 aa14.38□□□□□ -0.11
SHMT2-219ENST00000555563 OPRD1P41143 372 aa14.38□□□□□ -0.11
SHMT2-219ENST00000555563 GPD2P43304 727 aa14.38□□□□□ -0.11
SHMT2-219ENST00000555563 KLK7P49862 253 aa14.38□□□□□ -0.11
SHMT2-219ENST00000555563 RAPGEF1Q13905 1077 aa14.38□□□□□ -0.11
SHMT2-219ENST00000555563 LY6G5CQ5SRR4 150 aa14.38□□□□□ -0.11
SHMT2-219ENST00000555563 KLHDC7AQ5VTJ3 777 aa14.38□□□□□ -0.11
SHMT2-219ENST00000555563 BSPRYQ5W0U4 402 aa14.38□□□□□ -0.11
SHMT2-219ENST00000555563 BTBD8Q5XKL5 378 aa14.38□□□□□ -0.11
SHMT2-219ENST00000555563 RHBDF2Q6PJF5 856 aa14.38□□□□□ -0.11
SHMT2-219ENST00000555563 Q6ZNB5 142 aa14.38□□□□□ -0.11
SHMT2-219ENST00000555563 HTR3DQ70Z44 454 aa14.38□□□□□ -0.11
SHMT2-219ENST00000555563 C12orf40Q86WS4 652 aa14.38□□□□□ -0.11
SHMT2-219ENST00000555563 FAM71AQ8IYT1 594 aa14.38□□□□□ -0.11
SHMT2-219ENST00000555563 CLEC4CQ8WTT0 213 aa14.38□□□□□ -0.11
SHMT2-219ENST00000555563 EDEM1Q92611 657 aa14.38□□□□□ -0.11
SHMT2-219ENST00000555563 EZH1Q92800 747 aaPredicted RBP14.38□□□□□ -0.11
SHMT2-219ENST00000555563 CD101Q93033 1021 aa14.38□□□□□ -0.11
SHMT2-219ENST00000555563 HSFY1Q96LI6 401 aa14.38□□□□□ -0.11
SHMT2-219ENST00000555563 ST7Q9NRC1 585 aa14.38□□□□□ -0.11
SHMT2-219ENST00000555563 MARCH2Q9P0N8 246 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms