RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 XRCC6P12956 609 aaKnown RBP eCLIP3.82□□□□□ -1.8
SRP54-207ENST00000555535 HOXB2P14652 356 aa3.82□□□□□ -1.8
SRP54-207ENST00000555535 ADORA2AP29274 412 aa3.82□□□□□ -1.8
SRP54-207ENST00000555535 UCP3P55916 312 aa3.82□□□□□ -1.8
SRP54-207ENST00000555535 PGS1Q32NB8 556 aa3.82□□□□□ -1.8
SRP54-207ENST00000555535 EARS2Q5JPH6 523 aaKnown RBP3.82□□□□□ -1.8
SRP54-207ENST00000555535 KHDC1LQ5JSQ8 128 aa3.82□□□□□ -1.8
SRP54-207ENST00000555535 FAM57BQ71RH2 274 aa3.82□□□□□ -1.8
SRP54-207ENST00000555535 TMEM199Q8N511 208 aa3.82□□□□□ -1.8
SRP54-207ENST00000555535 SLC44A5Q8NCS7 719 aa3.82□□□□□ -1.8
SRP54-207ENST00000555535 PLBD2Q8NHP8 589 aa3.82□□□□□ -1.8
SRP54-207ENST00000555535 WIPF2Q8TF74 440 aaPredicted RBP3.82□□□□□ -1.8
SRP54-207ENST00000555535 SLC35A4Q96G79 324 aa3.82□□□□□ -1.8
SRP54-207ENST00000555535 CDCP1Q9H5V8 836 aa3.82□□□□□ -1.8
SRP54-207ENST00000555535 CXorf36Q9H7Y0 433 aa3.82□□□□□ -1.8
SRP54-207ENST00000555535 RMI1Q9H9A7 625 aa3.82□□□□□ -1.8
SRP54-207ENST00000555535 XPR1Q9UBH6 696 aa3.82□□□□□ -1.8
SRP54-207ENST00000555535 PCDHA12Q9UN75 941 aa3.82□□□□□ -1.8
SRP54-207ENST00000555535 FER1L4A9Z1Z3 1794 aa3.81□□□□□ -1.8
SRP54-207ENST00000555535 DTNBO60941 627 aa3.81□□□□□ -1.8
SRP54-207ENST00000555535 ALDH2P05091 517 aa3.81□□□□□ -1.8
SRP54-207ENST00000555535 DIO1P49895 249 aa3.81□□□□□ -1.8
SRP54-207ENST00000555535 CFHR3Q02985 330 aa3.81□□□□□ -1.8
SRP54-207ENST00000555535 PTGR1Q14914 329 aa3.81□□□□□ -1.8
SRP54-207ENST00000555535 MLC1Q15049 377 aa3.81□□□□□ -1.8
SRP54-207ENST00000555535 PFKFB3Q16875 520 aaPredicted RBP3.81□□□□□ -1.8
SRP54-207ENST00000555535 MGAT5BQ3V5L5 792 aa3.81□□□□□ -1.8
SRP54-207ENST00000555535 NGDNQ8NEJ9 315 aaKnown RBP3.81□□□□□ -1.8
SRP54-207ENST00000555535 BRIX1Q8TDN6 353 aaKnown RBP3.81□□□□□ -1.8
SRP54-207ENST00000555535 FZD3Q9NPG1 666 aa3.81□□□□□ -1.8
SRP54-207ENST00000555535 SNX14Q9Y5W7 946 aa3.81□□□□□ -1.8
SRP54-207ENST00000555535 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.81□□□□□ -1.8
SRP54-207ENST00000555535 TMEM272A0A1B0GTI8 110 aa3.8□□□□□ -1.8
SRP54-207ENST00000555535 ZNF814B7Z6K7 855 aa3.8□□□□□ -1.8
SRP54-207ENST00000555535 ALG1L2C9J202 215 aa3.8□□□□□ -1.8
SRP54-207ENST00000555535 F8W810 466 aa3.8□□□□□ -1.8
SRP54-207ENST00000555535 SNUPNO95149 360 aaKnown RBP3.8□□□□□ -1.8
SRP54-207ENST00000555535 UMODP07911 640 aa3.8□□□□□ -1.8
SRP54-207ENST00000555535 CD19P15391 556 aa3.8□□□□□ -1.8
SRP54-207ENST00000555535 SLC11A2P49281 568 aa3.8□□□□□ -1.8
SRP54-207ENST00000555535 WNT3P56703 355 aa3.8□□□□□ -1.8
SRP54-207ENST00000555535 DSCR9P59020 149 aa3.8□□□□□ -1.8
SRP54-207ENST00000555535 WASHC2DQ5SRD0 308 aa3.8□□□□□ -1.8
SRP54-207ENST00000555535 TMEM240Q5SV17 173 aa3.8□□□□□ -1.8
SRP54-207ENST00000555535 SRGAP1Q7Z6B7 1085 aa3.8□□□□□ -1.8
SRP54-207ENST00000555535 SKAP1Q86WV1 359 aa3.8□□□□□ -1.8
SRP54-207ENST00000555535 MVB12AQ96EY5 273 aa3.8□□□□□ -1.8
SRP54-207ENST00000555535 MRGPRX1Q96LB2 322 aa3.8□□□□□ -1.8
SRP54-207ENST00000555535 MESP1Q9BRJ9 268 aa3.8□□□□□ -1.8
SRP54-207ENST00000555535 ARMT1Q9H993 441 aa3.8□□□□□ -1.8
SRP54-207ENST00000555535 HIF1ANQ9NWT6 349 aa3.8□□□□□ -1.8
SRP54-207ENST00000555535 SPEF1Q9Y4P9 236 aa3.8□□□□□ -1.8
SRP54-207ENST00000555535 C2CD4BA6NLJ0 364 aa3.79□□□□□ -1.8
SRP54-207ENST00000555535 ERI2A8K979 691 aaKnown RBP3.79□□□□□ -1.8
SRP54-207ENST00000555535 IL33O95760 270 aa3.79□□□□□ -1.8
SRP54-207ENST00000555535 PKMP14618 531 aaKnown RBP3.79□□□□□ -1.8
SRP54-207ENST00000555535 ATF7P17544 494 aaPredicted RBP3.79□□□□□ -1.8
SRP54-207ENST00000555535 KCNA3P22001 575 aa3.79□□□□□ -1.8
SRP54-207ENST00000555535 DGKEP52429 567 aa3.79□□□□□ -1.8
SRP54-207ENST00000555535 SLC12A2P55011 1212 aa3.79□□□□□ -1.8
SRP54-207ENST00000555535 CCDC157Q569K6 752 aa3.79□□□□□ -1.8
SRP54-207ENST00000555535 RNF187Q5TA31 235 aaPredicted RBP3.79□□□□□ -1.8
SRP54-207ENST00000555535 RTL10Q7L3V2 364 aa3.79□□□□□ -1.8
SRP54-207ENST00000555535 MORC1Q86VD1 984 aa3.79□□□□□ -1.8
SRP54-207ENST00000555535 HSPBAP1Q96EW2 488 aa3.79□□□□□ -1.8
SRP54-207ENST00000555535 P2RX7Q99572 595 aaKnown RBP3.79□□□□□ -1.8
SRP54-207ENST00000555535 ZNF556Q9HAH1 456 aa3.79□□□□□ -1.8
SRP54-207ENST00000555535 PLK2Q9NYY3 685 aa3.79□□□□□ -1.8
SRP54-207ENST00000555535 COG5Q9UP83 839 aa3.79□□□□□ -1.8
SRP54-207ENST00000555535 MED16Q9Y2X0 877 aa3.79□□□□□ -1.8
SRP54-207ENST00000555535 PCDHGB1Q9Y5G3 927 aa3.79□□□□□ -1.8
SRP54-207ENST00000555535 CLIC1O00299 241 aa3.78□□□□□ -1.8
SRP54-207ENST00000555535 SERPINB2P05120 415 aa3.78□□□□□ -1.8
SRP54-207ENST00000555535 KRT17Q04695 432 aa3.78□□□□□ -1.8
SRP54-207ENST00000555535 IZUMO4Q1ZYL8 232 aa3.78□□□□□ -1.8
SRP54-207ENST00000555535 LCE1FQ5T754 118 aa3.78□□□□□ -1.8
SRP54-207ENST00000555535 HPS3Q969F9 1004 aa3.78□□□□□ -1.8
SRP54-207ENST00000555535 PHF21BQ96EK2 531 aa3.78□□□□□ -1.8
SRP54-207ENST00000555535 CDK5RAP3Q96JB5 506 aa3.78□□□□□ -1.8
SRP54-207ENST00000555535 CGRRF1Q99675 332 aa3.78□□□□□ -1.8
SRP54-207ENST00000555535 C17orf80Q9BSJ5 609 aa3.78□□□□□ -1.8
SRP54-207ENST00000555535 TM6SF1Q9BZW5 370 aa3.78□□□□□ -1.8
SRP54-207ENST00000555535 SARS2Q9NP81 518 aaKnown RBP3.78□□□□□ -1.8
SRP54-207ENST00000555535 MSRB1Q9NZV6 116 aa3.78□□□□□ -1.8
SRP54-207ENST00000555535 MGAT4CQ9UBM8 478 aa3.78□□□□□ -1.8
SRP54-207ENST00000555535 STAP2Q9UGK3 403 aa3.78□□□□□ -1.8
SRP54-207ENST00000555535 CPA4Q9UI42 421 aa3.78□□□□□ -1.8
SRP54-207ENST00000555535 KCNG2Q9UJ96 466 aa3.78□□□□□ -1.8
SRP54-207ENST00000555535 TMX2Q9Y320 296 aa3.78□□□□□ -1.8
SRP54-207ENST00000555535 LUC7L2Q9Y383 392 aaKnown RBP3.78□□□□□ -1.8
SRP54-207ENST00000555535 KIF26BQ2KJY2 2108 aa3.77□□□□□ -1.81
SRP54-207ENST00000555535 A0A0B4J293 547 aa3.77□□□□□ -1.81
SRP54-207ENST00000555535 DENND3A2RUS2 1198 aa3.77□□□□□ -1.81
SRP54-207ENST00000555535 PODXLO00592 558 aa3.77□□□□□ -1.81
SRP54-207ENST00000555535 TBC1D4O60343 1298 aa3.77□□□□□ -1.81
SRP54-207ENST00000555535 PLAUP00749 431 aa3.77□□□□□ -1.81
SRP54-207ENST00000555535 ACAA1P09110 424 aaPredicted RBP3.77□□□□□ -1.81
SRP54-207ENST00000555535 AKAP5P24588 427 aa3.77□□□□□ -1.81
SRP54-207ENST00000555535 COMPP49747 757 aaPredicted RBP3.77□□□□□ -1.81
SRP54-207ENST00000555535 TAF6P49848 677 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms