RNA–Protein interactions for RNA: ENST00000555303.1

AC004828.1-201, humanhuman

TSL 3 BASIC

Gene AC004828.1, Length 654 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004828.1-201ENST00000555303 ADRB1P08588 477 aa9.5□□□□□ -0.89
AC004828.1-201ENST00000555303 CHRM1P11229 460 aaPredicted RBP9.5□□□□□ -0.89
AC004828.1-201ENST00000555303 ADORA2BP29275 332 aa9.5□□□□□ -0.89
AC004828.1-201ENST00000555303 HOXC13P31276 330 aa9.5□□□□□ -0.89
AC004828.1-201ENST00000555303 KIR2DL1P43626 348 aaPredicted RBP9.5□□□□□ -0.89
AC004828.1-201ENST00000555303 SEC13P55735 322 aa9.5□□□□□ -0.89
AC004828.1-201ENST00000555303 SLC8A3P57103 927 aa9.5□□□□□ -0.89
AC004828.1-201ENST00000555303 KDSRQ06136 332 aa9.5□□□□□ -0.89
AC004828.1-201ENST00000555303 ORC1Q13415 861 aa9.5□□□□□ -0.89
AC004828.1-201ENST00000555303 PPM1JQ5JR12 505 aa9.5□□□□□ -0.89
AC004828.1-201ENST00000555303 SPDYCQ5MJ68 293 aa9.5□□□□□ -0.89
AC004828.1-201ENST00000555303 ANO7Q6IWH7 933 aa9.5□□□□□ -0.89
AC004828.1-201ENST00000555303 C12orf40Q86WS4 652 aa9.5□□□□□ -0.89
AC004828.1-201ENST00000555303 BBS7Q8IWZ6 715 aa9.5□□□□□ -0.89
AC004828.1-201ENST00000555303 PHTF2Q8N3S3 785 aa9.5□□□□□ -0.89
AC004828.1-201ENST00000555303 ALLCQ8N6M5 410 aa9.5□□□□□ -0.89
AC004828.1-201ENST00000555303 TERB1Q8NA31 727 aa9.5□□□□□ -0.89
AC004828.1-201ENST00000555303 TXNDC5Q8NBS9 432 aaKnown RBP9.5□□□□□ -0.89
AC004828.1-201ENST00000555303 MDGA1Q8NFP4 955 aa9.5□□□□□ -0.89
AC004828.1-201ENST00000555303 OLIG1Q8TAK6 271 aa9.5□□□□□ -0.89
AC004828.1-201ENST00000555303 GSDMAQ96QA5 445 aa9.5□□□□□ -0.89
AC004828.1-201ENST00000555303 XPO6Q96QU8 1125 aaKnown RBP9.5□□□□□ -0.89
AC004828.1-201ENST00000555303 TWNKQ96RR1 684 aa9.5□□□□□ -0.89
AC004828.1-201ENST00000555303 TSG101Q99816 390 aa9.5□□□□□ -0.89
AC004828.1-201ENST00000555303 KLF16Q9BXK1 252 aaPredicted RBP9.5□□□□□ -0.89
AC004828.1-201ENST00000555303 DUSP16Q9BY84 665 aa9.5□□□□□ -0.89
AC004828.1-201ENST00000555303 UBXN6Q9BZV1 441 aa9.5□□□□□ -0.89
AC004828.1-201ENST00000555303 APOBEC3GQ9HC16 384 aaKnown RBP9.5□□□□□ -0.89
AC004828.1-201ENST00000555303 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.5□□□□□ -0.89
AC004828.1-201ENST00000555303 CLIC5Q9NZA1 410 aa9.5□□□□□ -0.89
AC004828.1-201ENST00000555303 WDR35Q9P2L0 1181 aa9.5□□□□□ -0.89
AC004828.1-201ENST00000555303 HOOK1Q9UJC3 728 aaKnown RBP9.5□□□□□ -0.89
AC004828.1-201ENST00000555303 DNMT3LQ9UJW3 386 aa9.5□□□□□ -0.89
AC004828.1-201ENST00000555303 MAPK8IP1Q9UQF2 711 aa9.5□□□□□ -0.89
AC004828.1-201ENST00000555303 ZNF510Q9Y2H8 683 aa9.5□□□□□ -0.89
AC004828.1-201ENST00000555303 STARD13Q9Y3M8 1113 aa9.5□□□□□ -0.89
AC004828.1-201ENST00000555303 CNOT1A5YKK6 2376 aaKnown RBP9.5□□□□□ -0.89
AC004828.1-201ENST00000555303 MYO18AQ92614 2054 aaKnown RBP9.49□□□□□ -0.89
AC004828.1-201ENST00000555303 CEP192Q8TEP8 1941 aa9.49□□□□□ -0.89
AC004828.1-201ENST00000555303 TBC1D3BA6NDS4 549 aa9.49□□□□□ -0.89
AC004828.1-201ENST00000555303 GOLGA6L4A6NEF3 574 aa9.49□□□□□ -0.89
AC004828.1-201ENST00000555303 CYP26A1O43174 497 aa9.49□□□□□ -0.89
AC004828.1-201ENST00000555303 CACNG3O60359 315 aa9.49□□□□□ -0.89
AC004828.1-201ENST00000555303 GDF9O60383 454 aa9.49□□□□□ -0.89
AC004828.1-201ENST00000555303 TULP3O75386 442 aa9.49□□□□□ -0.89
AC004828.1-201ENST00000555303 SMC2O95347 1197 aa9.49□□□□□ -0.89
AC004828.1-201ENST00000555303 KLF8O95600 359 aaPredicted RBP9.49□□□□□ -0.89
AC004828.1-201ENST00000555303 IRF1P10914 325 aa9.49□□□□□ -0.89
AC004828.1-201ENST00000555303 CD58P19256 250 aa9.49□□□□□ -0.89
AC004828.1-201ENST00000555303 ACO1P21399 889 aaKnown RBP9.49□□□□□ -0.89
AC004828.1-201ENST00000555303 GBP1P32455 592 aa9.49□□□□□ -0.89
AC004828.1-201ENST00000555303 TIE1P35590 1138 aa9.49□□□□□ -0.89
AC004828.1-201ENST00000555303 P2RY2P41231 377 aa9.49□□□□□ -0.89
AC004828.1-201ENST00000555303 PPP1R2P41236 205 aa9.49□□□□□ -0.89
AC004828.1-201ENST00000555303 PLA2G4AP47712 749 aa9.49□□□□□ -0.89
AC004828.1-201ENST00000555303 SLC6A11P48066 632 aa9.49□□□□□ -0.89
AC004828.1-201ENST00000555303 KIF11P52732 1056 aa9.49□□□□□ -0.89
AC004828.1-201ENST00000555303 YWHAEP62258 255 aaKnown RBP9.49□□□□□ -0.89
AC004828.1-201ENST00000555303 FKBP3Q00688 224 aaKnown RBP9.49□□□□□ -0.89
AC004828.1-201ENST00000555303 LRRC63Q05C16 580 aa9.49□□□□□ -0.89
AC004828.1-201ENST00000555303 BECN1Q14457 450 aa9.49□□□□□ -0.89
AC004828.1-201ENST00000555303 E2F5Q15329 346 aa9.49□□□□□ -0.89
AC004828.1-201ENST00000555303 SF3A2Q15428 464 aaKnown RBP9.49□□□□□ -0.89
AC004828.1-201ENST00000555303 ANO4Q32M45 955 aa9.49□□□□□ -0.89
AC004828.1-201ENST00000555303 STPG1Q5TH74 334 aa9.49□□□□□ -0.89
AC004828.1-201ENST00000555303 ZNF658Q5TYW1 1059 aaPredicted RBP9.49□□□□□ -0.89
AC004828.1-201ENST00000555303 GRAMD4Q6IC98 578 aa9.49□□□□□ -0.89
AC004828.1-201ENST00000555303 GPRIN1Q7Z2K8 1008 aa9.49□□□□□ -0.89
AC004828.1-201ENST00000555303 ZC3H3Q8IXZ2 948 aaKnown RBP9.49□□□□□ -0.89
AC004828.1-201ENST00000555303 ARHGAP18Q8N392 663 aa9.49□□□□□ -0.89
AC004828.1-201ENST00000555303 CCDC33Q8N5R6 958 aa9.49□□□□□ -0.89
AC004828.1-201ENST00000555303 ZNF513Q8N8E2 541 aaPredicted RBP9.49□□□□□ -0.89
AC004828.1-201ENST00000555303 ELMO3Q96BJ8 720 aa9.49□□□□□ -0.89
AC004828.1-201ENST00000555303 TPSD1Q9BZJ3 242 aa9.49□□□□□ -0.89
AC004828.1-201ENST00000555303 DCLK3Q9C098 648 aa9.49□□□□□ -0.89
AC004828.1-201ENST00000555303 RAB20Q9NX57 234 aa9.49□□□□□ -0.89
AC004828.1-201ENST00000555303 USP3Q9Y6I4 520 aa9.49□□□□□ -0.89
AC004828.1-201ENST00000555303 SDK1Q7Z5N4 2213 aa9.49□□□□□ -0.89
AC004828.1-201ENST00000555303 A0A1W2PQH9 124 aa9.48□□□□□ -0.89
AC004828.1-201ENST00000555303 SGK1O00141 431 aa9.48□□□□□ -0.89
AC004828.1-201ENST00000555303 SCAMP3O14828 347 aaKnown RBP9.48□□□□□ -0.89
AC004828.1-201ENST00000555303 GREM1O60565 184 aa9.48□□□□□ -0.89
AC004828.1-201ENST00000555303 CAVIN2O95810 425 aa9.48□□□□□ -0.89
AC004828.1-201ENST00000555303 RALAP11233 206 aa9.48□□□□□ -0.89
AC004828.1-201ENST00000555303 RARGP13631 454 aa9.48□□□□□ -0.89
AC004828.1-201ENST00000555303 HOXD12P35452 270 aa9.48□□□□□ -0.89
AC004828.1-201ENST00000555303 NUCB2P80303 420 aa9.48□□□□□ -0.89
AC004828.1-201ENST00000555303 COG7P83436 770 aa9.48□□□□□ -0.89
AC004828.1-201ENST00000555303 CREB5Q02930 508 aa9.48□□□□□ -0.89
AC004828.1-201ENST00000555303 MESP2Q0VG99 397 aa9.48□□□□□ -0.89
AC004828.1-201ENST00000555303 PNOCQ13519 176 aa9.48□□□□□ -0.89
AC004828.1-201ENST00000555303 C10orf120Q5SQS8 335 aa9.48□□□□□ -0.89
AC004828.1-201ENST00000555303 C10orf76Q5T2E6 689 aa9.48□□□□□ -0.89
AC004828.1-201ENST00000555303 PPP1R26Q5T8A7 1209 aaPredicted RBP9.48□□□□□ -0.89
AC004828.1-201ENST00000555303 ARHGAP17Q68EM7 881 aa9.48□□□□□ -0.89
AC004828.1-201ENST00000555303 TMEM92Q6UXU6 159 aa9.48□□□□□ -0.89
AC004828.1-201ENST00000555303 Q6ZNB5 142 aa9.48□□□□□ -0.89
AC004828.1-201ENST00000555303 CYP2U1Q7Z449 544 aa9.48□□□□□ -0.89
AC004828.1-201ENST00000555303 TMEM25Q86YD3 366 aa9.48□□□□□ -0.89
AC004828.1-201ENST00000555303 FMR1NBQ8N0W7 255 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms