RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 PMF1Q6P1K2 205 aa11.45□□□□□ -0.58
SHMT2-218ENST00000555213 MON1AQ86VX9 555 aa11.45□□□□□ -0.58
SHMT2-218ENST00000555213 C1orf131Q8NDD1 294 aaKnown RBP11.45□□□□□ -0.58
SHMT2-218ENST00000555213 ZSCAN18Q8TBC5 510 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-218ENST00000555213 MCRS1Q96EZ8 462 aa11.45□□□□□ -0.58
SHMT2-218ENST00000555213 C16orf45Q96MC5 204 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-218ENST00000555213 WDR24Q96S15 920 aa11.45□□□□□ -0.58
SHMT2-218ENST00000555213 MYADMQ96S97 322 aa11.45□□□□□ -0.58
SHMT2-218ENST00000555213 DEF6Q9H4E7 631 aa11.45□□□□□ -0.58
SHMT2-218ENST00000555213 PAXBP1Q9Y5B6 917 aa11.45□□□□□ -0.58
SHMT2-218ENST00000555213 PATJQ8NI35 1801 aa11.44□□□□□ -0.58
SHMT2-218ENST00000555213 GOLGA6L9A6NEM1 432 aa11.44□□□□□ -0.58
SHMT2-218ENST00000555213 BTNL10A8MVZ5 291 aa11.44□□□□□ -0.58
SHMT2-218ENST00000555213 LOC730098B7Z3J9 87 aa11.44□□□□□ -0.58
SHMT2-218ENST00000555213 TULP2O00295 520 aa11.44□□□□□ -0.58
SHMT2-218ENST00000555213 DPYSL4O14531 572 aa11.44□□□□□ -0.58
SHMT2-218ENST00000555213 RTN2O75298 545 aa11.44□□□□□ -0.58
SHMT2-218ENST00000555213 TADA3O75528 432 aa11.44□□□□□ -0.58
SHMT2-218ENST00000555213 FTLP02792 175 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-218ENST00000555213 CKMP06732 381 aa11.44□□□□□ -0.58
SHMT2-218ENST00000555213 USP17L7P0C7H9 530 aa11.44□□□□□ -0.58
SHMT2-218ENST00000555213 RALAP11233 206 aa11.44□□□□□ -0.58
SHMT2-218ENST00000555213 NSFP46459 744 aaKnown RBP11.44□□□□□ -0.58
SHMT2-218ENST00000555213 PTP4A2Q12974 167 aa11.44□□□□□ -0.58
SHMT2-218ENST00000555213 TCEAL1Q15170 157 aa11.44□□□□□ -0.58
SHMT2-218ENST00000555213 CLEC16AQ2KHT3 1053 aa11.44□□□□□ -0.58
SHMT2-218ENST00000555213 HECTD3Q5T447 861 aa11.44□□□□□ -0.58
SHMT2-218ENST00000555213 ACAD10Q6JQN1 1059 aa11.44□□□□□ -0.58
SHMT2-218ENST00000555213 RSRC2Q7L4I2 434 aaKnown RBP11.44□□□□□ -0.58
SHMT2-218ENST00000555213 TMEM150AQ86TG1 271 aa11.44□□□□□ -0.58
SHMT2-218ENST00000555213 SCML4Q8N228 414 aa11.44□□□□□ -0.58
SHMT2-218ENST00000555213 MAB21L3Q8N8X9 362 aa11.44□□□□□ -0.58
SHMT2-218ENST00000555213 IRGQQ8WZA9 623 aa11.44□□□□□ -0.58
SHMT2-218ENST00000555213 SMARCD2Q92925 531 aa11.44□□□□□ -0.58
SHMT2-218ENST00000555213 NXPE3Q969Y0 559 aa11.44□□□□□ -0.58
SHMT2-218ENST00000555213 E2F7Q96AV8 911 aa11.44□□□□□ -0.58
SHMT2-218ENST00000555213 UHRF1Q96T88 793 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-218ENST00000555213 SLC4A5Q9BY07 1137 aa11.44□□□□□ -0.58
SHMT2-218ENST00000555213 ULBP1Q9BZM6 244 aa11.44□□□□□ -0.58
SHMT2-218ENST00000555213 KIF9Q9HAQ2 790 aa11.44□□□□□ -0.58
SHMT2-218ENST00000555213 ZFP14Q9HCL3 533 aa11.44□□□□□ -0.58
SHMT2-218ENST00000555213 CLIC5Q9NZA1 410 aa11.44□□□□□ -0.58
SHMT2-218ENST00000555213 IGSF9Q9P2J2 1179 aa11.44□□□□□ -0.58
SHMT2-218ENST00000555213 INTUQ9ULD6 942 aa11.44□□□□□ -0.58
SHMT2-218ENST00000555213 USP3Q9Y6I4 520 aa11.44□□□□□ -0.58
SHMT2-218ENST00000555213 TMCO5BA8MYB1 307 aa11.43□□□□□ -0.58
SHMT2-218ENST00000555213 E5RJQ4 531 aa11.43□□□□□ -0.58
SHMT2-218ENST00000555213 MOSPD3O75425 235 aa11.43□□□□□ -0.58
SHMT2-218ENST00000555213 H2AFZP0C0S5 128 aa11.43□□□□□ -0.58
SHMT2-218ENST00000555213 ZDHHC11BP0C7U3 371 aa11.43□□□□□ -0.58
SHMT2-218ENST00000555213 COL9A1P20849 921 aa11.43□□□□□ -0.58
SHMT2-218ENST00000555213 WEE1P30291 646 aa11.43□□□□□ -0.58
SHMT2-218ENST00000555213 CDH5P33151 784 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-218ENST00000555213 YWHAGP61981 247 aaKnown RBP eCLIP11.43□□□□□ -0.58
SHMT2-218ENST00000555213 KIF5AQ12840 1032 aa11.43□□□□□ -0.58
SHMT2-218ENST00000555213 FAM78AQ5JUQ0 283 aa11.43□□□□□ -0.58
SHMT2-218ENST00000555213 STXBP5Q5T5C0 1151 aa11.43□□□□□ -0.58
SHMT2-218ENST00000555213 SNX30Q5VWJ9 437 aa11.43□□□□□ -0.58
SHMT2-218ENST00000555213 NAA35Q5VZE5 725 aa11.43□□□□□ -0.58
SHMT2-218ENST00000555213 TXNDC8Q6A555 127 aa11.43□□□□□ -0.58
SHMT2-218ENST00000555213 PM20D1Q6GTS8 502 aa11.43□□□□□ -0.58
SHMT2-218ENST00000555213 SYT10Q6XYQ8 523 aa11.43□□□□□ -0.58
SHMT2-218ENST00000555213 H2AFVQ71UI9 128 aa11.43□□□□□ -0.58
SHMT2-218ENST00000555213 KIAA1328Q86T90 577 aa11.43□□□□□ -0.58
SHMT2-218ENST00000555213 ERICH1Q86X53 443 aa11.43□□□□□ -0.58
SHMT2-218ENST00000555213 ZDHHC17Q8IUH5 632 aa11.43□□□□□ -0.58
SHMT2-218ENST00000555213 CMTM8Q8IZV2 173 aa11.43□□□□□ -0.58
SHMT2-218ENST00000555213 GJD3Q8N144 294 aa11.43□□□□□ -0.58
SHMT2-218ENST00000555213 ARHGEF26Q96DR7 871 aa11.43□□□□□ -0.58
SHMT2-218ENST00000555213 ASB16Q96NS5 453 aa11.43□□□□□ -0.58
SHMT2-218ENST00000555213 GUCA1BQ9UMX6 200 aa11.43□□□□□ -0.58
SHMT2-218ENST00000555213 A0A1W2PQH9 124 aa11.42□□□□□ -0.58
SHMT2-218ENST00000555213 FAM170AA1A519 330 aa11.42□□□□□ -0.58
SHMT2-218ENST00000555213 C2orf78A6NCI8 922 aa11.42□□□□□ -0.58
SHMT2-218ENST00000555213 C19orf67A6NJJ6 358 aa11.42□□□□□ -0.58
SHMT2-218ENST00000555213 PIK3R2O00459 728 aa11.42□□□□□ -0.58
SHMT2-218ENST00000555213 TLR5O60602 858 aa11.42□□□□□ -0.58
SHMT2-218ENST00000555213 ECI2O75521 394 aa11.42□□□□□ -0.58
SHMT2-218ENST00000555213 MOCS3O95396 460 aa11.42□□□□□ -0.58
SHMT2-218ENST00000555213 OAS1P00973 400 aaKnown RBP11.42□□□□□ -0.58
SHMT2-218ENST00000555213 TUBB4AP04350 444 aa11.42□□□□□ -0.58
SHMT2-218ENST00000555213 TMEM253P0C7T8 217 aa11.42□□□□□ -0.58
SHMT2-218ENST00000555213 MBL2P11226 248 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-218ENST00000555213 HDCP19113 662 aa11.42□□□□□ -0.58
SHMT2-218ENST00000555213 RPL34P49207 117 aaKnown RBP11.42□□□□□ -0.58
SHMT2-218ENST00000555213 DAOAP59103 153 aa11.42□□□□□ -0.58
SHMT2-218ENST00000555213 GNG11P61952 73 aa11.42□□□□□ -0.58
SHMT2-218ENST00000555213 NOMO3P69849 1222 aa11.42□□□□□ -0.58
SHMT2-218ENST00000555213 HTR4Q13639 388 aa11.42□□□□□ -0.58
SHMT2-218ENST00000555213 C10orf120Q5SQS8 335 aa11.42□□□□□ -0.58
SHMT2-218ENST00000555213 BTBD8Q5XKL5 378 aa11.42□□□□□ -0.58
SHMT2-218ENST00000555213 TMEM110Q86TL2 294 aa11.42□□□□□ -0.58
SHMT2-218ENST00000555213 DDX42Q86XP3 938 aaKnown RBP eCLIP11.42□□□□□ -0.58
SHMT2-218ENST00000555213 ARID3BQ8IVW6 561 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-218ENST00000555213 SLC35F6Q8N357 371 aa11.42□□□□□ -0.58
SHMT2-218ENST00000555213 RNF10Q8N5U6 811 aaKnown RBP11.42□□□□□ -0.58
SHMT2-218ENST00000555213 CELF5Q8N6W0 485 aaKnown RBP11.42□□□□□ -0.58
SHMT2-218ENST00000555213 RNF139Q8WU17 664 aa11.42□□□□□ -0.58
SHMT2-218ENST00000555213 CPA5Q8WXQ8 436 aa11.42□□□□□ -0.58
SHMT2-218ENST00000555213 FAM149B1Q96BN6 582 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms