RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 TADA2BQ86TJ2 420 aa10.68□□□□□ -0.7
SYNE2-215ENST00000554997 TXLNBQ8N3L3 684 aa10.68□□□□□ -0.7
SYNE2-215ENST00000554997 SHKBP1Q8TBC3 707 aa10.68□□□□□ -0.7
SYNE2-215ENST00000554997 SUSD6Q92537 303 aa10.68□□□□□ -0.7
SYNE2-215ENST00000554997 MRPS31Q92665 395 aaKnown RBP10.68□□□□□ -0.7
SYNE2-215ENST00000554997 ZNF653Q96CK0 615 aa10.68□□□□□ -0.7
SYNE2-215ENST00000554997 TCEAL4Q96EI5 215 aa10.68□□□□□ -0.7
SYNE2-215ENST00000554997 SLC2A13Q96QE2 648 aa10.68□□□□□ -0.7
SYNE2-215ENST00000554997 GCNAQ96QF7 691 aa10.68□□□□□ -0.7
SYNE2-215ENST00000554997 CDK5RAP1Q96SZ6 601 aaKnown RBP10.68□□□□□ -0.7
SYNE2-215ENST00000554997 SELENOOQ9BVL4 669 aa10.68□□□□□ -0.7
SYNE2-215ENST00000554997 SLC46A2Q9BY10 475 aa10.68□□□□□ -0.7
SYNE2-215ENST00000554997 PACSIN1Q9BY11 444 aa10.68□□□□□ -0.7
SYNE2-215ENST00000554997 KCNF1Q9H3M0 494 aa10.68□□□□□ -0.7
SYNE2-215ENST00000554997 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.68□□□□□ -0.7
SYNE2-215ENST00000554997 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.68□□□□□ -0.7
SYNE2-215ENST00000554997 MYO1AQ9UBC5 1043 aa10.68□□□□□ -0.7
SYNE2-215ENST00000554997 REXO2Q9Y3B8 237 aaKnown RBP10.68□□□□□ -0.7
SYNE2-215ENST00000554997 MRPS23Q9Y3D9 190 aaKnown RBP10.68□□□□□ -0.7
SYNE2-215ENST00000554997 SCINQ9Y6U3 715 aa10.68□□□□□ -0.7
SYNE2-215ENST00000554997 MYO7AQ13402 2215 aa10.68□□□□□ -0.7
SYNE2-215ENST00000554997 PRRC2BQ5JSZ5 2229 aaKnown RBP10.68□□□□□ -0.7
SYNE2-215ENST00000554997 CLUHO75153 1309 aa10.67□□□□□ -0.7
SYNE2-215ENST00000554997 BTNL10A8MVZ5 291 aa10.67□□□□□ -0.7
SYNE2-215ENST00000554997 H3BQ06 376 aaPredicted RBP10.67□□□□□ -0.7
SYNE2-215ENST00000554997 CAPN9O14815 690 aa10.67□□□□□ -0.7
SYNE2-215ENST00000554997 PJA2O43164 708 aa10.67□□□□□ -0.7
SYNE2-215ENST00000554997 TADA3O75528 432 aa10.67□□□□□ -0.7
SYNE2-215ENST00000554997 GRAP2O75791 330 aa10.67□□□□□ -0.7
SYNE2-215ENST00000554997 OAS1P00973 400 aaKnown RBP10.67□□□□□ -0.7
SYNE2-215ENST00000554997 HDCP19113 662 aa10.67□□□□□ -0.7
SYNE2-215ENST00000554997 KCNA5P22460 613 aa10.67□□□□□ -0.7
SYNE2-215ENST00000554997 WEE1P30291 646 aa10.67□□□□□ -0.7
SYNE2-215ENST00000554997 NOS2P35228 1153 aa10.67□□□□□ -0.7
SYNE2-215ENST00000554997 RFC1P35251 1148 aaPredicted RBP10.67□□□□□ -0.7
SYNE2-215ENST00000554997 ATP5C1P36542 298 aaKnown RBP10.67□□□□□ -0.7
SYNE2-215ENST00000554997 VAV2P52735 878 aa10.67□□□□□ -0.7
SYNE2-215ENST00000554997 PUS10Q3MIT2 529 aaKnown RBP10.67□□□□□ -0.7
SYNE2-215ENST00000554997 LEXMQ3ZCV2 418 aa10.67□□□□□ -0.7
SYNE2-215ENST00000554997 ARHGAP15Q53QZ3 475 aa10.67□□□□□ -0.7
SYNE2-215ENST00000554997 DCAF6Q58WW2 860 aa10.67□□□□□ -0.7
SYNE2-215ENST00000554997 SYPL2Q5VXT5 272 aa10.67□□□□□ -0.7
SYNE2-215ENST00000554997 TXNDC8Q6A555 127 aa10.67□□□□□ -0.7
SYNE2-215ENST00000554997 DNAJC24Q6P3W2 148 aa10.67□□□□□ -0.7
SYNE2-215ENST00000554997 DCUN1D2Q6PH85 259 aa10.67□□□□□ -0.7
SYNE2-215ENST00000554997 RHOT2Q8IXI1 618 aa10.67□□□□□ -0.7
SYNE2-215ENST00000554997 DEFB106AQ8N104 65 aa10.67□□□□□ -0.7
SYNE2-215ENST00000554997 ACRBPQ8NEB7 543 aa10.67□□□□□ -0.7
SYNE2-215ENST00000554997 MAFAQ8NHW3 353 aaPredicted RBP10.67□□□□□ -0.7
SYNE2-215ENST00000554997 ITFG1Q8TB96 612 aa10.67□□□□□ -0.7
SYNE2-215ENST00000554997 SLC35G2Q8TBE7 412 aa10.67□□□□□ -0.7
SYNE2-215ENST00000554997 RNF139Q8WU17 664 aa10.67□□□□□ -0.7
SYNE2-215ENST00000554997 EDEM1Q92611 657 aa10.67□□□□□ -0.7
SYNE2-215ENST00000554997 NT5C3BQ969T7 300 aa10.67□□□□□ -0.7
SYNE2-215ENST00000554997 FAM149B1Q96BN6 582 aa10.67□□□□□ -0.7
SYNE2-215ENST00000554997 ARHGEF26Q96DR7 871 aa10.67□□□□□ -0.7
SYNE2-215ENST00000554997 PIWIL1Q96J94 861 aaKnown RBP10.67□□□□□ -0.7
SYNE2-215ENST00000554997 CALR3Q96L12 384 aaKnown RBP10.67□□□□□ -0.7
SYNE2-215ENST00000554997 CYP2S1Q96SQ9 504 aa10.67□□□□□ -0.7
SYNE2-215ENST00000554997 DDX23Q9BUQ8 820 aaKnown RBP10.67□□□□□ -0.7
SYNE2-215ENST00000554997 RNF38Q9H0F5 515 aa10.67□□□□□ -0.7
SYNE2-215ENST00000554997 TASP1Q9H6P5 420 aa10.67□□□□□ -0.7
SYNE2-215ENST00000554997 OLA1Q9NTK5 396 aaKnown RBP10.67□□□□□ -0.7
SYNE2-215ENST00000554997 TMEM51Q9NW97 253 aa10.67□□□□□ -0.7
SYNE2-215ENST00000554997 RRN3Q9NYV6 651 aa10.67□□□□□ -0.7
SYNE2-215ENST00000554997 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.67□□□□□ -0.7
SYNE2-215ENST00000554997 GDE1Q9NZC3 331 aa10.67□□□□□ -0.7
SYNE2-215ENST00000554997 UVRAGQ9P2Y5 699 aa10.67□□□□□ -0.7
SYNE2-215ENST00000554997 NAALADL1Q9UQQ1 740 aa10.67□□□□□ -0.7
SYNE2-215ENST00000554997 PLXNA3P51805 1871 aa10.67□□□□□ -0.7
SYNE2-215ENST00000554997 PRUNE2Q8WUY3 3088 aa10.67□□□□□ -0.7
SYNE2-215ENST00000554997 A0A0A6YYK5 440 aaPredicted RBP10.66□□□□□ -0.7
SYNE2-215ENST00000554997 C2orf78A6NCI8 922 aa10.66□□□□□ -0.7
SYNE2-215ENST00000554997 RCCD1A6NED2 376 aa10.66□□□□□ -0.7
SYNE2-215ENST00000554997 GRXCR2A6NFK2 248 aa10.66□□□□□ -0.7
SYNE2-215ENST00000554997 C2CD4BA6NLJ0 364 aa10.66□□□□□ -0.7
SYNE2-215ENST00000554997 NRG2O14511 850 aaPredicted RBP10.66□□□□□ -0.7
SYNE2-215ENST00000554997 MBTPS2O43462 519 aa10.66□□□□□ -0.7
SYNE2-215ENST00000554997 TLR5O60602 858 aa10.66□□□□□ -0.7
SYNE2-215ENST00000554997 ENDOD1O94919 500 aa10.66□□□□□ -0.7
SYNE2-215ENST00000554997 OLFM2O95897 454 aa10.66□□□□□ -0.7
SYNE2-215ENST00000554997 TBX18O95935 607 aa10.66□□□□□ -0.7
SYNE2-215ENST00000554997 F9P00740 461 aa10.66□□□□□ -0.7
SYNE2-215ENST00000554997 CCDC175P0C221 793 aa10.66□□□□□ -0.7
SYNE2-215ENST00000554997 PDGFRAP16234 1089 aa10.66□□□□□ -0.7
SYNE2-215ENST00000554997 GJA1P17302 382 aa10.66□□□□□ -0.7
SYNE2-215ENST00000554997 RPL7AP62424 266 aaKnown RBP10.66□□□□□ -0.7
SYNE2-215ENST00000554997 KIF5AQ12840 1032 aa10.66□□□□□ -0.7
SYNE2-215ENST00000554997 SMAD4Q13485 552 aaKnown RBP10.66□□□□□ -0.7
SYNE2-215ENST00000554997 CBX2Q14781 532 aaPredicted RBP10.66□□□□□ -0.7
SYNE2-215ENST00000554997 TEAD2Q15562 447 aa10.66□□□□□ -0.7
SYNE2-215ENST00000554997 CLUL1Q15846 466 aa10.66□□□□□ -0.7
SYNE2-215ENST00000554997 SLC25A52Q3SY17 297 aa10.66□□□□□ -0.7
SYNE2-215ENST00000554997 CCDC14Q49A88 953 aa10.66□□□□□ -0.7
SYNE2-215ENST00000554997 HS1BP3Q53T59 392 aa10.66□□□□□ -0.7
SYNE2-215ENST00000554997 GPR158Q5T848 1215 aa10.66□□□□□ -0.7
SYNE2-215ENST00000554997 ZNF662Q6ZS27 426 aa10.66□□□□□ -0.7
SYNE2-215ENST00000554997 RSRC2Q7L4I2 434 aaKnown RBP10.66□□□□□ -0.7
SYNE2-215ENST00000554997 MAB21L3Q8N8X9 362 aa10.66□□□□□ -0.7
SYNE2-215ENST00000554997 JOSD2Q8TAC2 188 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms