RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	KRTAP15-1	Q3LI76	137 aa		6.23	□□□□□ -1.41
PSMC6-208	ENST00000554956	STRIP1	Q5VSL9	837 aa		6.23	□□□□□ -1.41
PSMC6-208	ENST00000554956	TTLL5	Q6EMB2	1281 aa		6.23	□□□□□ -1.41
PSMC6-208	ENST00000554956	SLC30A10	Q6XR72	485 aa		6.23	□□□□□ -1.41
PSMC6-208	ENST00000554956	CLNK	Q7Z7G1	428 aa		6.23	□□□□□ -1.41
PSMC6-208	ENST00000554956	COLGALT2	Q8IYK4	626 aa		6.23	□□□□□ -1.41
PSMC6-208	ENST00000554956	TCEAL8	Q8IYN2	117 aa		6.23	□□□□□ -1.41
PSMC6-208	ENST00000554956	ADGRG5	Q8IZF4	528 aa		6.23	□□□□□ -1.41
PSMC6-208	ENST00000554956	CAMKK1	Q8N5S9	505 aa		6.23	□□□□□ -1.41
PSMC6-208	ENST00000554956	C1GALT1C1	Q96EU7	318 aa		6.23	□□□□□ -1.41
PSMC6-208	ENST00000554956	TAAR9	Q96RI9	348 aa		6.23	□□□□□ -1.41
PSMC6-208	ENST00000554956	TRIB1	Q96RU8	372 aa		6.23	□□□□□ -1.41
PSMC6-208	ENST00000554956	ACO2	Q99798	780 aa	Known RBP	6.23	□□□□□ -1.41
PSMC6-208	ENST00000554956	TINAGL1	Q9GZM7	467 aa	Predicted RBP	6.23	□□□□□ -1.41
PSMC6-208	ENST00000554956	COA1	Q9GZY4	146 aa		6.23	□□□□□ -1.41
PSMC6-208	ENST00000554956	SMOC2	Q9H3U7	446 aa		6.23	□□□□□ -1.41
PSMC6-208	ENST00000554956	TOR3A	Q9H497	397 aa		6.23	□□□□□ -1.41
PSMC6-208	ENST00000554956	GPR35	Q9HC97	309 aa		6.23	□□□□□ -1.41
PSMC6-208	ENST00000554956	STAP2	Q9UGK3	403 aa		6.23	□□□□□ -1.41
PSMC6-208	ENST00000554956	TRPM7	Q96QT4	1865 aa		6.23	□□□□□ -1.41
PSMC6-208	ENST00000554956	ZNF804B	A4D1E1	1349 aa		6.23	□□□□□ -1.41
PSMC6-208	ENST00000554956	FANCI	Q9NVI1	1328 aa		6.23	□□□□□ -1.41
PSMC6-208	ENST00000554956	CASP8AP2	Q9UKL3	1982 aa		6.22	□□□□□ -1.41
PSMC6-208	ENST00000554956	VPS4B	O75351	444 aa		6.22	□□□□□ -1.41
PSMC6-208	ENST00000554956	KIF20A	O95235	890 aa		6.22	□□□□□ -1.41
PSMC6-208	ENST00000554956	HDC	P19113	662 aa		6.22	□□□□□ -1.41
PSMC6-208	ENST00000554956	GATA3	P23771	443 aa		6.22	□□□□□ -1.41
PSMC6-208	ENST00000554956	MPL	P40238	635 aa		6.22	□□□□□ -1.41
PSMC6-208	ENST00000554956	TBX4	P57082	545 aa		6.22	□□□□□ -1.41
PSMC6-208	ENST00000554956	FKBP1B	P68106	108 aa		6.22	□□□□□ -1.41
PSMC6-208	ENST00000554956	TAP1	Q03518	808 aa		6.22	□□□□□ -1.41
PSMC6-208	ENST00000554956	HABP2	Q14520	560 aa	Predicted RBP	6.22	□□□□□ -1.41
PSMC6-208	ENST00000554956	PREPL	Q4J6C6	727 aa	Predicted RBP	6.22	□□□□□ -1.41
PSMC6-208	ENST00000554956	BEND3	Q5T5X7	828 aa		6.22	□□□□□ -1.41
PSMC6-208	ENST00000554956	FAM102B	Q5T8I3	360 aa		6.22	□□□□□ -1.41
PSMC6-208	ENST00000554956	CXorf57	Q6NSI4	855 aa	Known RBP	6.22	□□□□□ -1.41
PSMC6-208	ENST00000554956	CTU1	Q7Z7A3	348 aa	Known RBP	6.22	□□□□□ -1.41
PSMC6-208	ENST00000554956	DENND1C	Q8IV53	801 aa		6.22	□□□□□ -1.41
PSMC6-208	ENST00000554956	CHPF	Q8IZ52	775 aa		6.22	□□□□□ -1.41
PSMC6-208	ENST00000554956	PCSK9	Q8NBP7	692 aa	Known RBP	6.22	□□□□□ -1.41
PSMC6-208	ENST00000554956	ZBTB34	Q8NCN2	500 aa		6.22	□□□□□ -1.41
PSMC6-208	ENST00000554956	LINS1	Q8NG48	757 aa		6.22	□□□□□ -1.41
PSMC6-208	ENST00000554956	KLHDC4	Q8TBB5	520 aa		6.22	□□□□□ -1.41
PSMC6-208	ENST00000554956	SLC35G2	Q8TBE7	412 aa		6.22	□□□□□ -1.41
PSMC6-208	ENST00000554956	DNAAF4	Q8WXU2	420 aa		6.22	□□□□□ -1.41
PSMC6-208	ENST00000554956	CDK5RAP3	Q96JB5	506 aa		6.22	□□□□□ -1.41
PSMC6-208	ENST00000554956	CLMN	Q96JQ2	1002 aa		6.22	□□□□□ -1.41
PSMC6-208	ENST00000554956	FAM167A	Q96KS9	214 aa		6.22	□□□□□ -1.41
PSMC6-208	ENST00000554956	COQ10A	Q96MF6	247 aa		6.22	□□□□□ -1.41
PSMC6-208	ENST00000554956	SMO	Q99835	787 aa		6.22	□□□□□ -1.41
PSMC6-208	ENST00000554956	AIFM2	Q9BRQ8	373 aa		6.22	□□□□□ -1.41
PSMC6-208	ENST00000554956	LRFN3	Q9BTN0	628 aa		6.22	□□□□□ -1.41
PSMC6-208	ENST00000554956	STK31	Q9BXU1	1019 aa		6.22	□□□□□ -1.41
PSMC6-208	ENST00000554956	SLITRK6	Q9H5Y7	841 aa		6.22	□□□□□ -1.41
PSMC6-208	ENST00000554956	CD209	Q9NNX6	404 aa		6.22	□□□□□ -1.41
PSMC6-208	ENST00000554956	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	6.22	□□□□□ -1.41
PSMC6-208	ENST00000554956	ETAA1	Q9NY74	926 aa		6.22	□□□□□ -1.41
PSMC6-208	ENST00000554956	PCDHA6	Q9UN73	950 aa		6.22	□□□□□ -1.41
PSMC6-208	ENST00000554956	CLRN2	A0PK11	232 aa		6.21	□□□□□ -1.42
PSMC6-208	ENST00000554956		M0QYG6	137 aa		6.21	□□□□□ -1.42
PSMC6-208	ENST00000554956	PRC1	O43663	620 aa		6.21	□□□□□ -1.42
PSMC6-208	ENST00000554956	UBXN7	O94888	489 aa		6.21	□□□□□ -1.42
PSMC6-208	ENST00000554956	TYRP1	P17643	537 aa		6.21	□□□□□ -1.42
PSMC6-208	ENST00000554956	ADRA1B	P35368	520 aa		6.21	□□□□□ -1.42
PSMC6-208	ENST00000554956	IGHMBP2	P38935	993 aa	Known RBP	6.21	□□□□□ -1.42
PSMC6-208	ENST00000554956	TM4SF4	P48230	202 aa		6.21	□□□□□ -1.42
PSMC6-208	ENST00000554956	ANXA11	P50995	505 aa	Known RBP	6.21	□□□□□ -1.42
PSMC6-208	ENST00000554956	RPS7	P62081	194 aa	Known RBP	6.21	□□□□□ -1.42
PSMC6-208	ENST00000554956	POU6F2	P78424	691 aa	Predicted RBP	6.21	□□□□□ -1.42
PSMC6-208	ENST00000554956	BLOC1S1	P78537	153 aa		6.21	□□□□□ -1.42
PSMC6-208	ENST00000554956	FPGS	Q05932	587 aa		6.21	□□□□□ -1.42
PSMC6-208	ENST00000554956	NEXN	Q0ZGT2	675 aa		6.21	□□□□□ -1.42
PSMC6-208	ENST00000554956	DYRK1A	Q13627	763 aa		6.21	□□□□□ -1.42
PSMC6-208	ENST00000554956	SP5	Q6BEB4	398 aa	Predicted RBP	6.21	□□□□□ -1.42
PSMC6-208	ENST00000554956		Q6ZNX1	250 aa		6.21	□□□□□ -1.42
PSMC6-208	ENST00000554956	TMPRSS9	Q7Z410	1059 aa		6.21	□□□□□ -1.42
PSMC6-208	ENST00000554956	SLC30A5	Q8TAD4	765 aa		6.21	□□□□□ -1.42
PSMC6-208	ENST00000554956	KAZALD1	Q96I82	304 aa		6.21	□□□□□ -1.42
PSMC6-208	ENST00000554956	PRMT6	Q96LA8	375 aa	Predicted RBP	6.21	□□□□□ -1.42
PSMC6-208	ENST00000554956	NT5C1B	Q96P26	610 aa		6.21	□□□□□ -1.42
PSMC6-208	ENST00000554956	MPHOSPH8	Q99549	860 aa		6.21	□□□□□ -1.42
PSMC6-208	ENST00000554956	PUS3	Q9BZE2	481 aa	Known RBP	6.21	□□□□□ -1.42
PSMC6-208	ENST00000554956	KCTD5	Q9NXV2	234 aa		6.21	□□□□□ -1.42
PSMC6-208	ENST00000554956	GABBR1	Q9UBS5	961 aa		6.21	□□□□□ -1.42
PSMC6-208	ENST00000554956	CPA4	Q9UI42	421 aa		6.21	□□□□□ -1.42
PSMC6-208	ENST00000554956	ZDHHC8	Q9ULC8	765 aa		6.21	□□□□□ -1.42
PSMC6-208	ENST00000554956	SSC5D	A1L4H1	1573 aa		6.21	□□□□□ -1.42
PSMC6-208	ENST00000554956	MAST3	O60307	1309 aa		6.21	□□□□□ -1.42
PSMC6-208	ENST00000554956	IL16	Q14005	1332 aa		6.21	□□□□□ -1.42
PSMC6-208	ENST00000554956	CCDC194	A0A1B0GVG4	234 aa		6.2	□□□□□ -1.42
PSMC6-208	ENST00000554956	ESRRB	O95718	433 aa		6.2	□□□□□ -1.42
PSMC6-208	ENST00000554956	IL1R1	P14778	569 aa		6.2	□□□□□ -1.42
PSMC6-208	ENST00000554956	HTR1B	P28222	390 aa		6.2	□□□□□ -1.42
PSMC6-208	ENST00000554956	MPP3	Q13368	585 aa		6.2	□□□□□ -1.42
PSMC6-208	ENST00000554956	GTF2H3	Q13889	308 aa		6.2	□□□□□ -1.42
PSMC6-208	ENST00000554956	TAF2	Q6P1X5	1199 aa		6.2	□□□□□ -1.42
PSMC6-208	ENST00000554956	TSHZ1	Q6ZSZ6	1077 aa		6.2	□□□□□ -1.42
PSMC6-208	ENST00000554956	C15orf52	Q6ZUT6	534 aa	Known RBP	6.2	□□□□□ -1.42
PSMC6-208	ENST00000554956	USP37	Q86T82	979 aa		6.2	□□□□□ -1.42
PSMC6-208	ENST00000554956	MYO1H	Q8N1T3	1032 aa		6.2	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms