RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 CTNNBL1Q8WYA6 563 aaPredicted RBP17.22■□□□□ 0.35
SPTLC2-203ENST00000554901 ZNF653Q96CK0 615 aa17.22■□□□□ 0.35
SPTLC2-203ENST00000554901 TCEAL4Q96EI5 215 aa17.22■□□□□ 0.35
SPTLC2-203ENST00000554901 NMUR1Q9HB89 426 aa17.22■□□□□ 0.35
SPTLC2-203ENST00000554901 RRN3Q9NYV6 651 aa17.22■□□□□ 0.35
SPTLC2-203ENST00000554901 USTQ9Y2C2 406 aa17.22■□□□□ 0.35
SPTLC2-203ENST00000554901 C2orf16Q68DN1 1984 aa17.22■□□□□ 0.35
SPTLC2-203ENST00000554901 GRXCR2A6NFK2 248 aa17.21■□□□□ 0.35
SPTLC2-203ENST00000554901 SIGLEC16A6NMB1 481 aa17.21■□□□□ 0.35
SPTLC2-203ENST00000554901 TLR5O60602 858 aa17.21■□□□□ 0.35
SPTLC2-203ENST00000554901 OLFM2O95897 454 aa17.21■□□□□ 0.35
SPTLC2-203ENST00000554901 OAS1P00973 400 aaKnown RBP17.21■□□□□ 0.35
SPTLC2-203ENST00000554901 KRT3P12035 628 aa17.21■□□□□ 0.35
SPTLC2-203ENST00000554901 MAGEA1P43355 309 aa17.21■□□□□ 0.35
SPTLC2-203ENST00000554901 CCZ1BP86790 482 aa17.21■□□□□ 0.35
SPTLC2-203ENST00000554901 CCZ1P86791 482 aaPredicted RBP17.21■□□□□ 0.35
SPTLC2-203ENST00000554901 DNAJC24Q6P3W2 148 aa17.21■□□□□ 0.35
SPTLC2-203ENST00000554901 FEZF2Q8TBJ5 459 aa17.21■□□□□ 0.35
SPTLC2-203ENST00000554901 NDRG1Q92597 394 aaKnown RBP17.21■□□□□ 0.35
SPTLC2-203ENST00000554901 PIWIL1Q96J94 861 aaKnown RBP17.21■□□□□ 0.35
SPTLC2-203ENST00000554901 SLC2A13Q96QE2 648 aa17.21■□□□□ 0.35
SPTLC2-203ENST00000554901 SELENOOQ9BVL4 669 aa17.21■□□□□ 0.35
SPTLC2-203ENST00000554901 POMKQ9H5K3 350 aa17.21■□□□□ 0.35
SPTLC2-203ENST00000554901 CNOT8Q9UFF9 292 aaKnown RBP17.21■□□□□ 0.35
SPTLC2-203ENST00000554901 TMEM59LQ9UK28 342 aa17.21■□□□□ 0.35
SPTLC2-203ENST00000554901 CDH7Q9ULB5 785 aa17.21■□□□□ 0.35
SPTLC2-203ENST00000554901 NOTCH4Q99466 2003 aa17.21■□□□□ 0.35
SPTLC2-203ENST00000554901 DAB1O75553 588 aa17.21■□□□□ 0.34
SPTLC2-203ENST00000554901 ABL1P00519 1130 aa17.21■□□□□ 0.34
SPTLC2-203ENST00000554901 CYP1A2P05177 515 aa17.21■□□□□ 0.34
SPTLC2-203ENST00000554901 RARGP13631 454 aa17.21■□□□□ 0.34
SPTLC2-203ENST00000554901 MTF1Q14872 753 aa17.21■□□□□ 0.34
SPTLC2-203ENST00000554901 TEAD2Q15562 447 aa17.21■□□□□ 0.34
SPTLC2-203ENST00000554901 SMAD2Q15796 467 aaKnown RBP17.21■□□□□ 0.34
SPTLC2-203ENST00000554901 PPP1R15BQ5SWA1 713 aa17.21■□□□□ 0.34
SPTLC2-203ENST00000554901 GPR158Q5T848 1215 aa17.21■□□□□ 0.34
SPTLC2-203ENST00000554901 MSANTD2Q6P1R3 559 aa17.21■□□□□ 0.34
SPTLC2-203ENST00000554901 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.21■□□□□ 0.34
SPTLC2-203ENST00000554901 ITFG1Q8TB96 612 aa17.21■□□□□ 0.34
SPTLC2-203ENST00000554901 RNF139Q8WU17 664 aa17.21■□□□□ 0.34
SPTLC2-203ENST00000554901 KHSRPQ92945 711 aaKnown RBP eCLIP17.21■□□□□ 0.345e-8■■■■■ 27.9
SPTLC2-203ENST00000554901 THAP2Q9H0W7 228 aa17.21■□□□□ 0.34
SPTLC2-203ENST00000554901 OSER1Q9NX31 292 aa17.21■□□□□ 0.34
SPTLC2-203ENST00000554901 THEGQ9P2T0 379 aa17.21■□□□□ 0.34
SPTLC2-203ENST00000554901 PCDHA13Q9Y5I0 950 aa17.21■□□□□ 0.34
SPTLC2-203ENST00000554901 TRAV19A0A0A6YYK7 116 aa17.2■□□□□ 0.34
SPTLC2-203ENST00000554901 GOLGA8SH3BPF8 625 aa17.2■□□□□ 0.34
SPTLC2-203ENST00000554901 CAPN9O14815 690 aa17.2■□□□□ 0.34
SPTLC2-203ENST00000554901 FYNP06241 537 aa17.2■□□□□ 0.34
SPTLC2-203ENST00000554901 CEBPBP17676 345 aa17.2■□□□□ 0.34
SPTLC2-203ENST00000554901 ABCB4P21439 1286 aa17.2■□□□□ 0.34
SPTLC2-203ENST00000554901 NOS2P35228 1153 aa17.2■□□□□ 0.34
SPTLC2-203ENST00000554901 ATP5C1P36542 298 aaKnown RBP17.2■□□□□ 0.34
SPTLC2-203ENST00000554901 MATKP42679 507 aa17.2■□□□□ 0.34
SPTLC2-203ENST00000554901 PGFP49763 221 aa17.2■□□□□ 0.34
SPTLC2-203ENST00000554901 CYP4F8P98187 520 aa17.2■□□□□ 0.34
SPTLC2-203ENST00000554901 MAMLD1Q13495 774 aa17.2■□□□□ 0.34
SPTLC2-203ENST00000554901 TXNDC8Q6A555 127 aa17.2■□□□□ 0.34
SPTLC2-203ENST00000554901 HFE2Q6ZVN8 426 aa17.2■□□□□ 0.34
SPTLC2-203ENST00000554901 RSRC2Q7L4I2 434 aaKnown RBP17.2■□□□□ 0.34
SPTLC2-203ENST00000554901 GET4Q7L5D6 327 aaPredicted RBP17.2■□□□□ 0.34
SPTLC2-203ENST00000554901 OTOP3Q7RTS5 596 aa17.2■□□□□ 0.34
SPTLC2-203ENST00000554901 NPAS3Q8IXF0 933 aa17.2■□□□□ 0.34
SPTLC2-203ENST00000554901 FGF13Q92913 245 aa17.2■□□□□ 0.34
SPTLC2-203ENST00000554901 METTL5Q9NRN9 209 aaKnown RBP17.2■□□□□ 0.34
SPTLC2-203ENST00000554901 UVRAGQ9P2Y5 699 aa17.2■□□□□ 0.34
SPTLC2-203ENST00000554901 CDH22Q9UJ99 828 aa17.2■□□□□ 0.34
SPTLC2-203ENST00000554901 MYO16Q9Y6X6 1858 aa17.2■□□□□ 0.34
SPTLC2-203ENST00000554901 NCAM1P13591 858 aa17.19■□□□□ 0.34
SPTLC2-203ENST00000554901 GJA1P17302 382 aa17.19■□□□□ 0.34
SPTLC2-203ENST00000554901 HDCP19113 662 aa17.19■□□□□ 0.34
SPTLC2-203ENST00000554901 SLC7A9P82251 487 aa17.19■□□□□ 0.34
SPTLC2-203ENST00000554901 TCEAL1Q15170 157 aa17.19■□□□□ 0.34
SPTLC2-203ENST00000554901 TAF5Q15542 800 aa17.19■□□□□ 0.34
SPTLC2-203ENST00000554901 PTCRAQ6ISU1 281 aaPredicted RBP17.19■□□□□ 0.34
SPTLC2-203ENST00000554901 DCUN1D2Q6PH85 259 aa17.19■□□□□ 0.34
SPTLC2-203ENST00000554901 RHOT2Q8IXI1 618 aa17.19■□□□□ 0.34
SPTLC2-203ENST00000554901 CMTM8Q8IZV2 173 aa17.19■□□□□ 0.34
SPTLC2-203ENST00000554901 MAB21L3Q8N8X9 362 aa17.19■□□□□ 0.34
SPTLC2-203ENST00000554901 FNIP1Q8TF40 1166 aa17.19■□□□□ 0.34
SPTLC2-203ENST00000554901 PHF7Q9BWX1 381 aaPredicted RBP17.19■□□□□ 0.34
SPTLC2-203ENST00000554901 SLC46A2Q9BY10 475 aa17.19■□□□□ 0.34
SPTLC2-203ENST00000554901 SLITRK6Q9H5Y7 841 aa17.19■□□□□ 0.34
SPTLC2-203ENST00000554901 CCSER2Q9H7U1 834 aa17.19■□□□□ 0.34
SPTLC2-203ENST00000554901 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.19■□□□□ 0.34
SPTLC2-203ENST00000554901 LCMT1Q9UIC8 334 aa17.19■□□□□ 0.34
SPTLC2-203ENST00000554901 DNMT3LQ9UJW3 386 aa17.19■□□□□ 0.34
SPTLC2-203ENST00000554901 STAP1Q9ULZ2 295 aa17.19■□□□□ 0.34
SPTLC2-203ENST00000554901 DOCK6Q96HP0 2047 aa17.19■□□□□ 0.34
SPTLC2-203ENST00000554901 FAM170AA1A519 330 aa17.18■□□□□ 0.34
SPTLC2-203ENST00000554901 C2orf78A6NCI8 922 aa17.18■□□□□ 0.34
SPTLC2-203ENST00000554901 COCHO43405 550 aa17.18■□□□□ 0.34
SPTLC2-203ENST00000554901 DESP17661 470 aa17.18■□□□□ 0.34
SPTLC2-203ENST00000554901 AVPR1AP37288 418 aa17.18■□□□□ 0.34
SPTLC2-203ENST00000554901 KPNA1P52294 538 aaPredicted RBP17.18■□□□□ 0.34
SPTLC2-203ENST00000554901 NNTQ13423 1086 aa17.18■□□□□ 0.34
SPTLC2-203ENST00000554901 DCAF6Q58WW2 860 aa17.18■□□□□ 0.34
SPTLC2-203ENST00000554901 C10orf120Q5SQS8 335 aa17.18■□□□□ 0.34
SPTLC2-203ENST00000554901 DNAAF5Q86Y56 855 aa17.18■□□□□ 0.34
SPTLC2-203ENST00000554901 DEFB106AQ8N104 65 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms