RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 SNRPFP62306 86 aaKnown RBP16.23■□□□□ 0.19
SYNE3-203ENST00000554873 SEPT6Q14141 434 aa16.23■□□□□ 0.19
SYNE3-203ENST00000554873 CCDC142Q17RM4 750 aa16.23■□□□□ 0.19
SYNE3-203ENST00000554873 NIPAL1Q6NVV3 410 aa16.23■□□□□ 0.19
SYNE3-203ENST00000554873 DDHD1Q8NEL9 900 aa16.23■□□□□ 0.19
SYNE3-203ENST00000554873 FAM118BQ9BPY3 351 aa16.23■□□□□ 0.19
SYNE3-203ENST00000554873 HGH1Q9BTY7 390 aa16.23■□□□□ 0.19
SYNE3-203ENST00000554873 RAB20Q9NX57 234 aa16.23■□□□□ 0.19
SYNE3-203ENST00000554873 C6orf203Q9P0P8 240 aaPredicted RBP16.23■□□□□ 0.19
SYNE3-203ENST00000554873 COL20A1Q9P218 1284 aa16.23■□□□□ 0.19
SYNE3-203ENST00000554873 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.23■□□□□ 0.19
SYNE3-203ENST00000554873 SPO11Q9Y5K1 396 aa16.23■□□□□ 0.19
SYNE3-203ENST00000554873 LOXHD1Q8IVV2 1947 aa16.23■□□□□ 0.19
SYNE3-203ENST00000554873 SLX4Q8IY92 1834 aa16.23■□□□□ 0.19
SYNE3-203ENST00000554873 PRR5-ARHGAP8B1AHC4 643 aa16.23■□□□□ 0.19
SYNE3-203ENST00000554873 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.23■□□□□ 0.19
SYNE3-203ENST00000554873 KLF11O14901 512 aa16.23■□□□□ 0.19
SYNE3-203ENST00000554873 UNGP13051 313 aaPredicted RBP16.23■□□□□ 0.19
SYNE3-203ENST00000554873 KRT5P13647 590 aa16.23■□□□□ 0.19
SYNE3-203ENST00000554873 YWHABP31946 246 aaKnown RBP16.23■□□□□ 0.19
SYNE3-203ENST00000554873 ARHGAP8P85298 464 aa16.23■□□□□ 0.19
SYNE3-203ENST00000554873 HSF5Q4G112 596 aaPredicted RBP16.23■□□□□ 0.19
SYNE3-203ENST00000554873 C2CD6Q53TS8 623 aa16.23■□□□□ 0.19
SYNE3-203ENST00000554873 PGM2L1Q6PCE3 622 aa16.23■□□□□ 0.19
SYNE3-203ENST00000554873 AMIGO2Q86SJ2 522 aa16.23■□□□□ 0.19
SYNE3-203ENST00000554873 MCOLN2Q8IZK6 566 aa16.23■□□□□ 0.19
SYNE3-203ENST00000554873 FBXL13Q8NEE6 735 aa16.23■□□□□ 0.19
SYNE3-203ENST00000554873 RAB3IL1Q8TBN0 382 aa16.23■□□□□ 0.19
SYNE3-203ENST00000554873 USP6NLQ92738 828 aa16.23■□□□□ 0.19
SYNE3-203ENST00000554873 TRNAU1APQ9NX07 287 aaKnown RBP16.23■□□□□ 0.19
SYNE3-203ENST00000554873 IGSF9Q9P2J2 1179 aa16.23■□□□□ 0.19
SYNE3-203ENST00000554873 PPP1R1BQ9UD71 204 aaPredicted RBP16.23■□□□□ 0.19
SYNE3-203ENST00000554873 CCPG1Q9ULG6 757 aa16.23■□□□□ 0.19
SYNE3-203ENST00000554873 STRIP2Q9ULQ0 834 aa16.23■□□□□ 0.19
SYNE3-203ENST00000554873 EP400Q96L91 3159 aa16.22■□□□□ 0.19
SYNE3-203ENST00000554873 E5RJQ4 531 aa16.22■□□□□ 0.19
SYNE3-203ENST00000554873 CAPN15O75808 1086 aa16.22■□□□□ 0.19
SYNE3-203ENST00000554873 KLRC2P26717 231 aa16.22■□□□□ 0.19
SYNE3-203ENST00000554873 HMOX2P30519 316 aa16.22■□□□□ 0.19
SYNE3-203ENST00000554873 SLC25A3Q00325 362 aa16.22■□□□□ 0.19
SYNE3-203ENST00000554873 HP1BP3Q5SSJ5 553 aaPredicted RBP16.22■□□□□ 0.19
SYNE3-203ENST00000554873 TMEM214Q6NUQ4 689 aaKnown RBP16.22■□□□□ 0.19
SYNE3-203ENST00000554873 CENPSQ8N2Z9 138 aa16.22■□□□□ 0.19
SYNE3-203ENST00000554873 CPA5Q8WXQ8 436 aa16.22■□□□□ 0.19
SYNE3-203ENST00000554873 SGF29Q96ES7 293 aa16.22■□□□□ 0.19
SYNE3-203ENST00000554873 PI4K2AQ9BTU6 479 aa16.22■□□□□ 0.19
SYNE3-203ENST00000554873 KIFC3Q9BVG8 833 aa16.22■□□□□ 0.19
SYNE3-203ENST00000554873 FHDC1Q9C0D6 1143 aaPredicted RBP16.22■□□□□ 0.19
SYNE3-203ENST00000554873 SF3B1O75533 1304 aaKnown RBP eCLIP16.22■□□□□ 0.19
SYNE3-203ENST00000554873 GOLGA8RI6L899 631 aa16.22■□□□□ 0.19
SYNE3-203ENST00000554873 ALOX15BO15296 676 aa16.22■□□□□ 0.19
SYNE3-203ENST00000554873 LPXNO60711 386 aa16.22■□□□□ 0.19
SYNE3-203ENST00000554873 CNOT3O75175 753 aaKnown RBP16.22■□□□□ 0.19
SYNE3-203ENST00000554873 ETV4P43268 484 aa16.22■□□□□ 0.19
SYNE3-203ENST00000554873 ALDH3B2P48448 385 aa16.22■□□□□ 0.19
SYNE3-203ENST00000554873 EPHB1P54762 984 aa16.22■□□□□ 0.19
SYNE3-203ENST00000554873 GK3PQ14409 553 aa16.22■□□□□ 0.19
SYNE3-203ENST00000554873 CCNG2Q16589 344 aa16.22■□□□□ 0.19
SYNE3-203ENST00000554873 UGCGQ16739 394 aa16.22■□□□□ 0.19
SYNE3-203ENST00000554873 ZNF829Q3KNS6 432 aaPredicted RBP16.22■□□□□ 0.19
SYNE3-203ENST00000554873 C6orf183Q5T699 404 aa16.22■□□□□ 0.19
SYNE3-203ENST00000554873 METTL21CQ5VZV1 264 aa16.22■□□□□ 0.19
SYNE3-203ENST00000554873 SV2AQ7L0J3 742 aa16.22■□□□□ 0.19
SYNE3-203ENST00000554873 IQCF2Q8IXL9 164 aa16.22■□□□□ 0.19
SYNE3-203ENST00000554873 SAMD3Q8N6K7 520 aa16.22■□□□□ 0.19
SYNE3-203ENST00000554873 MZB1Q8WU39 189 aa16.22■□□□□ 0.19
SYNE3-203ENST00000554873 TTC17Q96AE7 1141 aa16.22■□□□□ 0.19
SYNE3-203ENST00000554873 FAM84AQ96KN4 292 aa16.22■□□□□ 0.19
SYNE3-203ENST00000554873 NLRP4Q96MN2 994 aa16.22■□□□□ 0.19
SYNE3-203ENST00000554873 TBX20Q9UMR3 447 aa16.22■□□□□ 0.19
SYNE3-203ENST00000554873 SQORQ9Y6N5 450 aa16.22■□□□□ 0.19
SYNE3-203ENST00000554873 RALAP11233 206 aa16.21■□□□□ 0.19
SYNE3-203ENST00000554873 AOC1P19801 751 aa16.21■□□□□ 0.19
SYNE3-203ENST00000554873 ALDH18A1P54886 795 aaKnown RBP16.21■□□□□ 0.19
SYNE3-203ENST00000554873 ZBTB17Q13105 803 aa16.21■□□□□ 0.19
SYNE3-203ENST00000554873 MTMR2Q13614 643 aa16.21■□□□□ 0.19
SYNE3-203ENST00000554873 FAM102BQ5T8I3 360 aa16.21■□□□□ 0.19
SYNE3-203ENST00000554873 ADGRD1Q6QNK2 874 aa16.21■□□□□ 0.19
SYNE3-203ENST00000554873 KBTBD6Q86V97 674 aa16.21■□□□□ 0.19
SYNE3-203ENST00000554873 PQLC1Q8N2U9 271 aa16.21■□□□□ 0.19
SYNE3-203ENST00000554873 OGFOD1Q8N543 542 aa16.21■□□□□ 0.19
SYNE3-203ENST00000554873 TRIML2Q8N7C3 387 aa16.21■□□□□ 0.19
SYNE3-203ENST00000554873 SREK1Q8WXA9 508 aaKnown RBP16.21■□□□□ 0.19
SYNE3-203ENST00000554873 EME1Q96AY2 570 aa16.21■□□□□ 0.19
SYNE3-203ENST00000554873 ARMC7Q9H6L4 198 aa16.21■□□□□ 0.19
SYNE3-203ENST00000554873 AGO4Q9HCK5 861 aaKnown RBP16.21■□□□□ 0.19
SYNE3-203ENST00000554873 K7EPI3 171 aa16.21■□□□□ 0.19
SYNE3-203ENST00000554873 SERPINA6P08185 405 aa16.21■□□□□ 0.19
SYNE3-203ENST00000554873 KLF1Q13351 362 aaPredicted RBP16.21■□□□□ 0.19
SYNE3-203ENST00000554873 PSMD6Q15008 389 aa16.21■□□□□ 0.19
SYNE3-203ENST00000554873 EFTUD2Q15029 972 aaKnown RBP eCLIP16.21■□□□□ 0.195e-7■■■■□ 24.2
SYNE3-203ENST00000554873 TMEM161BQ8NDZ6 487 aa16.21■□□□□ 0.19
SYNE3-203ENST00000554873 HIPK4Q8NE63 616 aa16.21■□□□□ 0.19
SYNE3-203ENST00000554873 CATSPER1Q8NEC5 780 aa16.21■□□□□ 0.19
SYNE3-203ENST00000554873 MASTLQ96GX5 879 aa16.21■□□□□ 0.19
SYNE3-203ENST00000554873 KLF6Q99612 283 aaPredicted RBP16.21■□□□□ 0.19
SYNE3-203ENST00000554873 PAIP1Q9H074 479 aaKnown RBP16.21■□□□□ 0.19
SYNE3-203ENST00000554873 HERC5Q9UII4 1024 aaKnown RBP16.21■□□□□ 0.19
SYNE3-203ENST00000554873 TCP10L2B9ZVM9 353 aa16.2■□□□□ 0.18
SYNE3-203ENST00000554873 DNALI1O14645 258 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms