RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 APOC2P02655 101 aa12.31□□□□□ -0.44
XRCC3-208ENST00000554811 ABHD2P08910 425 aa12.31□□□□□ -0.44
XRCC3-208ENST00000554811 TPBGLP0DKB5 382 aa12.31□□□□□ -0.44
XRCC3-208ENST00000554811 T-ENOLP0DO92 83 aa12.31□□□□□ -0.44
XRCC3-208ENST00000554811 TFE3P19532 575 aaPredicted RBP12.31□□□□□ -0.44
XRCC3-208ENST00000554811 KCNA3P22001 575 aa12.31□□□□□ -0.44
XRCC3-208ENST00000554811 STX3Q13277 289 aa12.31□□□□□ -0.44
XRCC3-208ENST00000554811 RIPK1Q13546 671 aa12.31□□□□□ -0.44
XRCC3-208ENST00000554811 GRAMD1BQ3KR37 738 aa12.31□□□□□ -0.44
XRCC3-208ENST00000554811 DCLK2Q8N568 766 aa12.31□□□□□ -0.44
XRCC3-208ENST00000554811 SLC35B2Q8TB61 432 aa12.31□□□□□ -0.44
XRCC3-208ENST00000554811 PPP4R1Q8TF05 950 aa12.31□□□□□ -0.44
XRCC3-208ENST00000554811 PYDC1Q8WXC3 89 aa12.31□□□□□ -0.44
XRCC3-208ENST00000554811 TSC22D3Q99576 134 aa12.31□□□□□ -0.44
XRCC3-208ENST00000554811 MIPEPQ99797 713 aa12.31□□□□□ -0.44
XRCC3-208ENST00000554811 BTBD10Q9BSF8 475 aa12.31□□□□□ -0.44
XRCC3-208ENST00000554811 ZFATQ9P243 1243 aa12.31□□□□□ -0.44
XRCC3-208ENST00000554811 MFHAS1Q9Y4C4 1052 aa12.31□□□□□ -0.44
XRCC3-208ENST00000554811 SPDYE5A6NIY4 337 aa12.31□□□□□ -0.44
XRCC3-208ENST00000554811 EIF4BP23588 611 aaKnown RBP12.31□□□□□ -0.44
XRCC3-208ENST00000554811 ASPAP45381 313 aa12.31□□□□□ -0.44
XRCC3-208ENST00000554811 EFHC2Q5JST6 749 aa12.31□□□□□ -0.44
XRCC3-208ENST00000554811 VWA5B1Q5TIE3 1220 aa12.31□□□□□ -0.44
XRCC3-208ENST00000554811 IER5Q5VY09 327 aa12.31□□□□□ -0.44
XRCC3-208ENST00000554811 RAPH1Q70E73 1250 aa12.31□□□□□ -0.44
XRCC3-208ENST00000554811 GBP5Q96PP8 586 aa12.31□□□□□ -0.44
XRCC3-208ENST00000554811 LGMNQ99538 433 aa12.31□□□□□ -0.44
XRCC3-208ENST00000554811 EBF4Q9BQW3 602 aa12.31□□□□□ -0.44
XRCC3-208ENST00000554811 MED10Q9BTT4 135 aa12.31□□□□□ -0.44
XRCC3-208ENST00000554811 FOXP3Q9BZS1 431 aa12.31□□□□□ -0.44
XRCC3-208ENST00000554811 TMPRSS4Q9NRS4 437 aa12.31□□□□□ -0.44
XRCC3-208ENST00000554811 NMRK1Q9NWW6 199 aa12.31□□□□□ -0.44
XRCC3-208ENST00000554811 SLC5A4Q9NY91 659 aa12.31□□□□□ -0.44
XRCC3-208ENST00000554811 NUMBLQ9Y6R0 609 aa12.31□□□□□ -0.44
XRCC3-208ENST00000554811 DPPA5A6NC42 116 aa12.3□□□□□ -0.44
XRCC3-208ENST00000554811 MSCO60682 206 aa12.3□□□□□ -0.44
XRCC3-208ENST00000554811 STK10O94804 968 aaKnown RBP12.3□□□□□ -0.44
XRCC3-208ENST00000554811 LSM8O95777 96 aaKnown RBP12.3□□□□□ -0.44
XRCC3-208ENST00000554811 TRUB2O95900 331 aaKnown RBP12.3□□□□□ -0.44
XRCC3-208ENST00000554811 SKIP12755 728 aa12.3□□□□□ -0.44
XRCC3-208ENST00000554811 MLH1P40692 756 aa12.3□□□□□ -0.44
XRCC3-208ENST00000554811 TAP1Q03518 808 aa12.3□□□□□ -0.44
XRCC3-208ENST00000554811 MOGSQ13724 837 aa12.3□□□□□ -0.44
XRCC3-208ENST00000554811 ACSBG2Q5FVE4 666 aa12.3□□□□□ -0.44
XRCC3-208ENST00000554811 TNFAIP8L3Q5GJ75 292 aa12.3□□□□□ -0.44
XRCC3-208ENST00000554811 TCHHL1Q5QJ38 904 aaPredicted RBP12.3□□□□□ -0.44
XRCC3-208ENST00000554811 SLC26A11Q86WA9 606 aa12.3□□□□□ -0.44
XRCC3-208ENST00000554811 ARHGAP24Q8N264 748 aa12.3□□□□□ -0.44
XRCC3-208ENST00000554811 PYROXD2Q8N2H3 581 aa12.3□□□□□ -0.44
XRCC3-208ENST00000554811 SPDYE1Q8NFV5 336 aaPredicted RBP12.3□□□□□ -0.44
XRCC3-208ENST00000554811 RNF34Q969K3 372 aa12.3□□□□□ -0.44
XRCC3-208ENST00000554811 APOPT1Q96IL0 206 aa12.3□□□□□ -0.44
XRCC3-208ENST00000554811 PCYT2Q99447 389 aa12.3□□□□□ -0.44
XRCC3-208ENST00000554811 RNPEPQ9H4A4 650 aa12.3□□□□□ -0.44
XRCC3-208ENST00000554811 CLEC11AQ9Y240 323 aa12.3□□□□□ -0.44
XRCC3-208ENST00000554811 DNAJC16Q9Y2G8 782 aa12.3□□□□□ -0.44
XRCC3-208ENST00000554811 SNCAIPQ9Y6H5 919 aa12.3□□□□□ -0.44
XRCC3-208ENST00000554811 DNAH12Q6ZR08 3092 aa12.3□□□□□ -0.44
XRCC3-208ENST00000554811 PRPF4O43172 522 aaKnown RBP eCLIP12.3□□□□□ -0.44
XRCC3-208ENST00000554811 TYROBPO43914 113 aa12.3□□□□□ -0.44
XRCC3-208ENST00000554811 CCDC130P13994 396 aa12.3□□□□□ -0.44
XRCC3-208ENST00000554811 INSRRP14616 1297 aa12.3□□□□□ -0.44
XRCC3-208ENST00000554811 AKAP5P24588 427 aa12.3□□□□□ -0.44
XRCC3-208ENST00000554811 TYK2P29597 1187 aa12.3□□□□□ -0.44
XRCC3-208ENST00000554811 BAG6P46379 1132 aa12.3□□□□□ -0.44
XRCC3-208ENST00000554811 MXD4Q14582 209 aaPredicted RBP12.3□□□□□ -0.44
XRCC3-208ENST00000554811 RNF220Q5VTB9 566 aa12.3□□□□□ -0.44
XRCC3-208ENST00000554811 CATSPERGQ6ZRH7 1159 aa12.3□□□□□ -0.44
XRCC3-208ENST00000554811 ZNF354CQ86Y25 554 aa12.3□□□□□ -0.44
XRCC3-208ENST00000554811 NAT8LQ8N9F0 302 aa12.3□□□□□ -0.44
XRCC3-208ENST00000554811 USP33Q8TEY7 942 aa12.3□□□□□ -0.44
XRCC3-208ENST00000554811 NKD2Q969F2 451 aaPredicted RBP12.3□□□□□ -0.44
XRCC3-208ENST00000554811 MTBPQ96DY7 904 aa12.3□□□□□ -0.44
XRCC3-208ENST00000554811 SCYL1Q96KG9 808 aa12.3□□□□□ -0.44
XRCC3-208ENST00000554811 SCOCQ9UIL1 159 aa12.3□□□□□ -0.44
XRCC3-208ENST00000554811 DRG1Q9Y295 367 aaKnown RBP12.3□□□□□ -0.44
XRCC3-208ENST00000554811 ACTL7BQ9Y614 415 aa12.3□□□□□ -0.44
XRCC3-208ENST00000554811 PRR5-ARHGAP8B1AHC4 643 aa12.3□□□□□ -0.44
XRCC3-208ENST00000554811 HOXC6P09630 235 aa12.3□□□□□ -0.44
XRCC3-208ENST00000554811 TCN1P20061 433 aaPredicted RBP12.3□□□□□ -0.44
XRCC3-208ENST00000554811 ACAT1P24752 427 aaKnown RBP12.3□□□□□ -0.44
XRCC3-208ENST00000554811 ARHGAP8P85298 464 aa12.3□□□□□ -0.44
XRCC3-208ENST00000554811 SLC45A4Q5BKX6 768 aa12.3□□□□□ -0.44
XRCC3-208ENST00000554811 TTC39BQ5VTQ0 682 aaPredicted RBP12.3□□□□□ -0.44
XRCC3-208ENST00000554811 TNS4Q8IZW8 715 aa12.3□□□□□ -0.44
XRCC3-208ENST00000554811 SLC4A11Q8NBS3 891 aa12.3□□□□□ -0.44
XRCC3-208ENST00000554811 DENND1AQ8TEH3 1009 aa12.3□□□□□ -0.44
XRCC3-208ENST00000554811 DCAKDQ8WVC6 231 aa12.3□□□□□ -0.44
XRCC3-208ENST00000554811 SNRNP25Q9BV90 132 aaKnown RBP12.3□□□□□ -0.44
XRCC3-208ENST00000554811 NT5C1AQ9BXI3 368 aa12.3□□□□□ -0.44
XRCC3-208ENST00000554811 VCXQ9H320 206 aa12.3□□□□□ -0.44
XRCC3-208ENST00000554811 TAF1LQ8IZX4 1826 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 ADM5C9JUS6 153 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 CSH1P0DML2 217 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 CSH2P0DML3 217 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 CDK16Q00536 496 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 SLC25A11Q02978 314 aaKnown RBP12.29□□□□□ -0.44
XRCC3-208ENST00000554811 CUL3Q13618 768 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 TCEAL1Q15170 157 aa12.29□□□□□ -0.44
XRCC3-208ENST00000554811 CCDC142Q17RM4 750 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms