RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 MARCH8Q5T0T0 291 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 SLFN12LQ6IEE8 588 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 TAF2Q6P1X5 1199 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 ABHD15Q6UXT9 468 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.68□□□□□ -1.663e-7■■■□□ 16.7
VTI1B-203ENST00000554636 TMCO2Q7Z6W1 182 aaPredicted RBP4.68□□□□□ -1.66
VTI1B-203ENST00000554636 PLA2G4DQ86XP0 818 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 CCDC60Q8IWA6 550 aaPredicted RBP4.68□□□□□ -1.66
VTI1B-203ENST00000554636 MAFAQ8NHW3 353 aaPredicted RBP4.68□□□□□ -1.66
VTI1B-203ENST00000554636 ZBTB10Q96DT7 871 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 TUBGCP5Q96RT8 1024 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 OR10A2Q9H208 303 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 TMPRSS5Q9H3S3 457 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 SMARCAD1Q9H4L7 1026 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 PRDM12Q9H4Q4 367 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 SH3GLB2Q9NR46 395 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 FANCLQ9NW38 375 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 ERAP1Q9NZ08 941 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 H2AFY2Q9P0M6 372 aaPredicted RBP4.68□□□□□ -1.66
VTI1B-203ENST00000554636 MSRAQ9UJ68 235 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 TPCN1Q9ULQ1 816 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 TTC3P53804 2025 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 EVPLQ92817 2033 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 A0A0C4DFX4 3053 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 STK36Q9NRP7 1315 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 IGSF9BQ9UPX0 1349 aa4.68□□□□□ -1.66
VTI1B-203ENST00000554636 CUL9Q8IWT3 2517 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 ABHD14A-ACY1A0A1B0GW23 586 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 C1QTNF3-AMACRE9PGA6 284 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 CBX4O00257 560 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 CPLX1O14810 134 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 MSH4O15457 936 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 DTNBO60941 627 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 GJB5O95377 273 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 TDP2O95551 362 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 PRLP01236 227 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 GHRP10912 638 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 COMTP21964 271 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 NLRP5P59047 1200 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 IGBP1P78318 339 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 MRPS6P82932 125 aaKnown RBP4.67□□□□□ -1.66
VTI1B-203ENST00000554636 ZXDAP98168 799 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 ROM1Q03395 351 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 TAP1Q03518 808 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 LPIN1Q14693 890 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 ME3Q16798 604 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 PRR16Q569H4 304 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 TRIM68Q6AZZ1 485 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 CNNM4Q6P4Q7 775 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 MOXD1Q6UVY6 613 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 PLPPR4Q7Z2D5 763 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 BLIDQ8IZY5 108 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 FAM177A1Q8N128 213 aaPredicted RBP4.67□□□□□ -1.66
VTI1B-203ENST00000554636 NXPE1Q8N323 547 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 DBF4BQ8NFT6 615 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 BICD2Q8TD16 824 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 TRAPPC12Q8WVT3 735 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 DNAJB3Q8WWF6 145 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 CFHR4Q92496 578 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 GLG1Q92896 1179 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 SLC5A5Q92911 643 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 GTF3C6Q969F1 213 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 MBOAT7Q96N66 472 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 UIMC1Q96RL1 719 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 FOXB1Q99853 325 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 ZNF577Q9BSK1 485 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 SLKQ9H2G2 1235 aaPredicted RBP4.67□□□□□ -1.66
VTI1B-203ENST00000554636 GJB4Q9NTQ9 266 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 B4GALT6Q9UBX8 382 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 TUBE1Q9UJT0 475 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 KCNJ14Q9UNX9 436 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 TRPV2Q9Y5S1 764 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 CDY2AQ9Y6F7 541 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 MRPL42Q9Y6G3 142 aaKnown RBP4.67□□□□□ -1.66
VTI1B-203ENST00000554636 ATG2AQ2TAZ0 1938 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 VCANP13611 3396 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 TTC28Q96AY4 2481 aa4.67□□□□□ -1.66
VTI1B-203ENST00000554636 NLRC5Q86WI3 1866 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 MYO7AQ13402 2215 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 COL1A2P08123 1366 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 TRANK1O15050 2925 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 REV3LO60673 3130 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 CYP3A7-CYP3A51PA0A087WV96 503 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 SMIM35A0A1B0GVV1 85 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 RRN3P2A6NIE6 340 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 ZNF891A8MT65 544 aaPredicted RBP4.66□□□□□ -1.66
VTI1B-203ENST00000554636 IPO5O00410 1097 aaKnown RBP4.66□□□□□ -1.66
VTI1B-203ENST00000554636 HBP1O60381 514 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 LPXNO60711 386 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 CDKL5O76039 1030 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 FSHBP01225 129 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 AMHP03971 560 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 C6P13671 934 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 FDPSP14324 419 aaKnown RBP4.66□□□□□ -1.66
VTI1B-203ENST00000554636 ACO1P21399 889 aaKnown RBP4.66□□□□□ -1.66
VTI1B-203ENST00000554636 CYP3A7P24462 503 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 MSX2P35548 267 aaPredicted RBP4.66□□□□□ -1.66
VTI1B-203ENST00000554636 FNTBP49356 437 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 SLC26A2P50443 739 aa4.66□□□□□ -1.66
VTI1B-203ENST00000554636 ERVK-21P61565 698 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms