RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 ADORA2BP29275 332 aa16.3■□□□□ 0.2
ARHGEF40-203ENST00000554514 ADCYAP1R1P41586 468 aa16.3■□□□□ 0.2
ARHGEF40-203ENST00000554514 ACAP1Q15027 740 aa16.3■□□□□ 0.2
ARHGEF40-203ENST00000554514 FAM13CQ8NE31 585 aa16.3■□□□□ 0.2
ARHGEF40-203ENST00000554514 OPTNQ96CV9 577 aa16.3■□□□□ 0.2
ARHGEF40-203ENST00000554514 APOPT1Q96IL0 206 aa16.3■□□□□ 0.2
ARHGEF40-203ENST00000554514 CYLDQ9NQC7 956 aa16.3■□□□□ 0.2
ARHGEF40-203ENST00000554514 SNTG2Q9NY99 539 aa16.3■□□□□ 0.2
ARHGEF40-203ENST00000554514 PAK5Q9P286 719 aa16.3■□□□□ 0.2
ARHGEF40-203ENST00000554514 TSPAN1O60635 241 aa16.3■□□□□ 0.2
ARHGEF40-203ENST00000554514 LCP1P13796 627 aa16.3■□□□□ 0.2
ARHGEF40-203ENST00000554514 OSBPP22059 807 aa16.3■□□□□ 0.2
ARHGEF40-203ENST00000554514 SERPINB3P29508 390 aa16.3■□□□□ 0.2
ARHGEF40-203ENST00000554514 PSEN1P49768 467 aa16.3■□□□□ 0.2
ARHGEF40-203ENST00000554514 ARFIP2P53365 341 aa16.3■□□□□ 0.2
ARHGEF40-203ENST00000554514 IRX4P78413 519 aa16.3■□□□□ 0.2
ARHGEF40-203ENST00000554514 CLNKQ7Z7G1 428 aa16.3■□□□□ 0.2
ARHGEF40-203ENST00000554514 TTC8Q8TAM2 541 aa16.3■□□□□ 0.2
ARHGEF40-203ENST00000554514 C18orf25Q96B23 403 aaPredicted RBP16.3■□□□□ 0.2
ARHGEF40-203ENST00000554514 DPEP3Q9H4B8 488 aa16.3■□□□□ 0.2
ARHGEF40-203ENST00000554514 GBA2Q9HCG7 927 aaPredicted RBP16.3■□□□□ 0.2
ARHGEF40-203ENST00000554514 ETNK2Q9NVF9 386 aa16.3■□□□□ 0.2
ARHGEF40-203ENST00000554514 SYNJ2BP-COX16A0A087WUM0 186 aa16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 C2CD2LO14523 706 aa16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 ATP5HO75947 161 aa16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 GBE1Q04446 702 aa16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 ZNF484Q5JVG2 852 aa16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 SESTD1Q86VW0 696 aa16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 SRPK1Q96SB4 655 aaKnown RBP16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 TMEM120AQ9BXJ8 343 aa16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 KLC2Q9H0B6 622 aa16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 SSU72Q9NP77 194 aaKnown RBP16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 COX16Q9P0S2 106 aa16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 TUBGCP4Q9UGJ1 667 aa16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 ITGA11Q9UKX5 1188 aa16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 TTLL3Q9Y4R7 772 aa16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 A0A0G2JMZ2 1700 aa16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 LRRC37A2A6NM11 1700 aa16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 KITP10721 976 aa16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 GRIA1P42261 906 aa16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 TLDC1Q6P9B6 456 aa16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 OLFML1Q6UWY5 402 aa16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 MPP5Q8N3R9 675 aa16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 ARMC2Q8NEN0 867 aa16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 ALKBH8Q96BT7 664 aaKnown RBP16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 VPS11Q9H270 941 aa16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 ARL8BQ9NVJ2 186 aa16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 HESX1Q9UBX0 185 aa16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 FETUBQ9UGM5 382 aa16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 MFHAS1Q9Y4C4 1052 aa16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 NME7Q9Y5B8 376 aa16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 CENPFP49454 3210 aa16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 CHADO15335 359 aa16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 PAPSS1O43252 624 aaPredicted RBP16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 ENTPD5O75356 428 aa16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 ENDOD1O94919 500 aa16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 CCDC130P13994 396 aa16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 GM2AP17900 193 aa16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 CYP2F1P24903 491 aa16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 SLC45A4Q5BKX6 768 aa16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 TTC7BQ86TV6 843 aa16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 CAND1Q86VP6 1230 aaKnown RBP16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 ZMAT2Q96NC0 199 aaKnown RBP16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 ZNF395Q9H8N7 513 aaPredicted RBP16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 SMYD2Q9NRG4 433 aa16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 MARCOQ9UEW3 520 aaPredicted RBP16.29■□□□□ 0.2
ARHGEF40-203ENST00000554514 SCN1AP35498 2009 aa16.28■□□□□ 0.2
ARHGEF40-203ENST00000554514 FAM237BA0A1B0GVD1 139 aa16.28■□□□□ 0.2
ARHGEF40-203ENST00000554514 HAUS5O94927 633 aa16.28■□□□□ 0.2
ARHGEF40-203ENST00000554514 METTL18O95568 372 aa16.28■□□□□ 0.2
ARHGEF40-203ENST00000554514 TOP3BO95985 862 aaKnown RBP16.28■□□□□ 0.2
ARHGEF40-203ENST00000554514 SLC6A3Q01959 620 aa16.28■□□□□ 0.2
ARHGEF40-203ENST00000554514 INCA1Q0VD86 236 aa16.28■□□□□ 0.2
ARHGEF40-203ENST00000554514 MDH1BQ5I0G3 518 aa16.28■□□□□ 0.2
ARHGEF40-203ENST00000554514 MROH9Q5TGP6 573 aa16.28■□□□□ 0.2
ARHGEF40-203ENST00000554514 BSPRYQ5W0U4 402 aa16.28■□□□□ 0.2
ARHGEF40-203ENST00000554514 TRMT10BQ6PF06 316 aaKnown RBP16.28■□□□□ 0.2
ARHGEF40-203ENST00000554514 MTHFD1LQ6UB35 978 aa16.28■□□□□ 0.2
ARHGEF40-203ENST00000554514 SLC26A11Q86WA9 606 aa16.28■□□□□ 0.2
ARHGEF40-203ENST00000554514 ANKRD13AQ8IZ07 590 aa16.28■□□□□ 0.2
ARHGEF40-203ENST00000554514 ZNF570Q96NI8 536 aa16.28■□□□□ 0.2
ARHGEF40-203ENST00000554514 ARMCX1Q9P291 453 aa16.28■□□□□ 0.2
ARHGEF40-203ENST00000554514 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.28■□□□□ 0.2
ARHGEF40-203ENST00000554514 CYB561D2O14569 222 aa16.28■□□□□ 0.2
ARHGEF40-203ENST00000554514 SERPINB4P48594 390 aa16.28■□□□□ 0.2
ARHGEF40-203ENST00000554514 NEK3P51956 506 aa16.28■□□□□ 0.2
ARHGEF40-203ENST00000554514 HDAC4P56524 1084 aa16.28■□□□□ 0.2
ARHGEF40-203ENST00000554514 BOLA3Q53S33 107 aa16.28■□□□□ 0.2
ARHGEF40-203ENST00000554514 RFWD3Q6PCD5 774 aa16.28■□□□□ 0.2
ARHGEF40-203ENST00000554514 NUDCD1Q96RS6 583 aa16.28■□□□□ 0.2
ARHGEF40-203ENST00000554514 CEP41Q9BYV8 373 aa16.28■□□□□ 0.2
ARHGEF40-203ENST00000554514 PHACTR1Q9C0D0 580 aa16.28■□□□□ 0.2
ARHGEF40-203ENST00000554514 POPDC2Q9HBU9 364 aa16.28■□□□□ 0.2
ARHGEF40-203ENST00000554514 PCMTD2Q9NV79 361 aa16.28■□□□□ 0.2
ARHGEF40-203ENST00000554514 OTOFQ9HC10 1997 aa16.27■□□□□ 0.2
ARHGEF40-203ENST00000554514 A8MXQ7 604 aa16.27■□□□□ 0.2
ARHGEF40-203ENST00000554514 SMAPO00193 183 aa16.27■□□□□ 0.2
ARHGEF40-203ENST00000554514 GABBR2O75899 941 aa16.27■□□□□ 0.2
ARHGEF40-203ENST00000554514 CPA2P48052 419 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms