RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 KCNK4Q9NYG8 393 aa18■□□□□ 0.47
NEK9-204ENST00000554258 EIF2B4Q9UI10 523 aaKnown RBP18■□□□□ 0.47
NEK9-204ENST00000554258 TTC26A0AVF1 554 aa17.99■□□□□ 0.47
NEK9-204ENST00000554258 RFPL3O75679 317 aa17.99■□□□□ 0.47
NEK9-204ENST00000554258 SYKP43405 635 aa17.99■□□□□ 0.47
NEK9-204ENST00000554258 CSNK1EP49674 416 aaKnown RBP17.99■□□□□ 0.47
NEK9-204ENST00000554258 CCT8P50990 548 aa17.99■□□□□ 0.47
NEK9-204ENST00000554258 PPP2R3AQ06190 1150 aa17.99■□□□□ 0.47
NEK9-204ENST00000554258 NFATC3Q12968 1075 aa17.99■□□□□ 0.47
NEK9-204ENST00000554258 TAS1R3Q7RTX0 852 aa17.99■□□□□ 0.47
NEK9-204ENST00000554258 PDILTQ8N807 584 aa17.99■□□□□ 0.47
NEK9-204ENST00000554258 LARP4BQ92615 738 aaKnown RBP17.99■□□□□ 0.47
NEK9-204ENST00000554258 CD248Q9HCU0 757 aa17.99■□□□□ 0.47
NEK9-204ENST00000554258 KBTBD4Q9NVX7 518 aa17.99■□□□□ 0.47
NEK9-204ENST00000554258 SNX11Q9Y5W9 270 aa17.99■□□□□ 0.47
NEK9-204ENST00000554258 ENO4A6NNW6 628 aa17.98■□□□□ 0.47
NEK9-204ENST00000554258 GOLGA6L22H0YM25 854 aa17.98■□□□□ 0.47
NEK9-204ENST00000554258 ACTN4O43707 911 aaKnown RBP17.98■□□□□ 0.47
NEK9-204ENST00000554258 PCDHGA12O60330 932 aa17.98■□□□□ 0.47
NEK9-204ENST00000554258 TOM1L1O75674 476 aa17.98■□□□□ 0.47
NEK9-204ENST00000554258 ZNF202O95125 648 aa17.98■□□□□ 0.47
NEK9-204ENST00000554258 SLFN14P0C7P3 912 aa17.98■□□□□ 0.47
NEK9-204ENST00000554258 STAT6P42226 847 aa17.98■□□□□ 0.47
NEK9-204ENST00000554258 NPTX2P47972 431 aa17.98■□□□□ 0.47
NEK9-204ENST00000554258 MCM6Q14566 821 aa17.98■□□□□ 0.47
NEK9-204ENST00000554258 KIF19Q2TAC6 998 aa17.98■□□□□ 0.47
NEK9-204ENST00000554258 C6orf132Q5T0Z8 1188 aa17.98■□□□□ 0.47
NEK9-204ENST00000554258 BTBD8Q5XKL5 378 aa17.98■□□□□ 0.47
NEK9-204ENST00000554258 EGFLAMQ63HQ2 1017 aa17.98■□□□□ 0.47
NEK9-204ENST00000554258 RINT1Q6NUQ1 792 aa17.98■□□□□ 0.47
NEK9-204ENST00000554258 C1orf186Q6ZWK4 172 aa17.98■□□□□ 0.47
NEK9-204ENST00000554258 KIAA1958Q8N8K9 716 aa17.98■□□□□ 0.47
NEK9-204ENST00000554258 NAT16Q8N8M0 369 aa17.98■□□□□ 0.47
NEK9-204ENST00000554258 RASSF8Q8NHQ8 419 aa17.98■□□□□ 0.47
NEK9-204ENST00000554258 ZFRQ96KR1 1074 aaKnown RBP17.98■□□□□ 0.47
NEK9-204ENST00000554258 RPF1Q9H9Y2 349 aaKnown RBP17.98■□□□□ 0.47
NEK9-204ENST00000554258 MAGEF1Q9HAY2 307 aa17.98■□□□□ 0.47
NEK9-204ENST00000554258 TMLHEQ9NVH6 421 aa17.98■□□□□ 0.47
NEK9-204ENST00000554258 WSB2Q9NYS7 404 aaPredicted RBP17.98■□□□□ 0.47
NEK9-204ENST00000554258 TP53BP1Q12888 1972 aaPredicted RBP17.98■□□□□ 0.47
NEK9-204ENST00000554258 E2F8A0AVK6 867 aa17.97■□□□□ 0.47
NEK9-204ENST00000554258 CYB561D2O14569 222 aa17.97■□□□□ 0.47
NEK9-204ENST00000554258 ENC1O14682 589 aa17.97■□□□□ 0.47
NEK9-204ENST00000554258 TERTO14746 1132 aaKnown RBP17.97■□□□□ 0.47
NEK9-204ENST00000554258 TRIM66O15016 1216 aa17.97■□□□□ 0.47
NEK9-204ENST00000554258 CLTAP09496 248 aa17.97■□□□□ 0.47
NEK9-204ENST00000554258 MATR3P43243 847 aaKnown RBP eCLIP17.97■□□□□ 0.47
NEK9-204ENST00000554258 AFF3P51826 1226 aaKnown RBP17.97■□□□□ 0.47
NEK9-204ENST00000554258 PCBP4P57723 403 aaKnown RBP17.97■□□□□ 0.47
NEK9-204ENST00000554258 TSPY1Q01534 308 aa17.97■□□□□ 0.47
NEK9-204ENST00000554258 NFE2Q16621 373 aaPredicted RBP17.97■□□□□ 0.47
NEK9-204ENST00000554258 ARSHQ5FYA8 562 aa17.97■□□□□ 0.47
NEK9-204ENST00000554258 LY6G5CQ5SRR4 150 aa17.97■□□□□ 0.47
NEK9-204ENST00000554258 TERB1Q8NA31 727 aa17.97■□□□□ 0.47
NEK9-204ENST00000554258 DHX58Q96C10 678 aa17.97■□□□□ 0.47
NEK9-204ENST00000554258 TIGD1Q96MW7 591 aa17.97■□□□□ 0.47
NEK9-204ENST00000554258 ACOX2Q99424 681 aa17.97■□□□□ 0.47
NEK9-204ENST00000554258 KCND2Q9NZV8 630 aa17.97■□□□□ 0.47
NEK9-204ENST00000554258 ARHGAP28Q9P2N2 729 aa17.97■□□□□ 0.47
NEK9-204ENST00000554258 DEC1Q9P2X7 70 aa17.97■□□□□ 0.47
NEK9-204ENST00000554258 SERTAD1Q9UHV2 236 aa17.97■□□□□ 0.47
NEK9-204ENST00000554258 HCN2Q9UL51 889 aa17.97■□□□□ 0.47
NEK9-204ENST00000554258 RAD54BQ9Y620 910 aa17.97■□□□□ 0.47
NEK9-204ENST00000554258 C2CD3Q4AC94 2353 aa17.96■□□□□ 0.47
NEK9-204ENST00000554258 METTL12A8MUP2 240 aa17.96■□□□□ 0.47
NEK9-204ENST00000554258 LACTBL1A8MY62 500 aa17.96■□□□□ 0.47
NEK9-204ENST00000554258 KCNK3O14649 394 aa17.96■□□□□ 0.47
NEK9-204ENST00000554258 TULP3O75386 442 aa17.96■□□□□ 0.47
NEK9-204ENST00000554258 C1SP09871 688 aa17.96■□□□□ 0.47
NEK9-204ENST00000554258 CYP2F1P24903 491 aa17.96■□□□□ 0.47
NEK9-204ENST00000554258 GUCY2CP25092 1073 aa17.96■□□□□ 0.47
NEK9-204ENST00000554258 GAD2Q05329 585 aa17.96■□□□□ 0.47
NEK9-204ENST00000554258 VAC14Q08AM6 782 aa17.96■□□□□ 0.47
NEK9-204ENST00000554258 C4orf17Q53FE4 359 aa17.96■□□□□ 0.47
NEK9-204ENST00000554258 SPATA1Q5VX52 437 aa17.96■□□□□ 0.47
NEK9-204ENST00000554258 C9orf57Q5W0N0 161 aa17.96■□□□□ 0.47
NEK9-204ENST00000554258 WSCD1Q658N2 575 aa17.96■□□□□ 0.47
NEK9-204ENST00000554258 CNNM4Q6P4Q7 775 aa17.96■□□□□ 0.47
NEK9-204ENST00000554258 SV2BQ7L1I2 683 aa17.96■□□□□ 0.47
NEK9-204ENST00000554258 ELOA2Q8IYF1 753 aaPredicted RBP17.96■□□□□ 0.47
NEK9-204ENST00000554258 IGSF8Q969P0 613 aa17.96■□□□□ 0.47
NEK9-204ENST00000554258 TNMDQ9H2S6 317 aa17.96■□□□□ 0.47
NEK9-204ENST00000554258 KMT5AQ9NQR1 393 aa17.96■□□□□ 0.47
NEK9-204ENST00000554258 SMPD4Q9NXE4 827 aa17.96■□□□□ 0.47
NEK9-204ENST00000554258 NUMA1Q14980 2115 aa17.95■□□□□ 0.46
NEK9-204ENST00000554258 CLDN3O15551 220 aa17.95■□□□□ 0.46
NEK9-204ENST00000554258 PFKLP17858 780 aa17.95■□□□□ 0.46
NEK9-204ENST00000554258 IL9RQ01113 521 aa17.95■□□□□ 0.46
NEK9-204ENST00000554258 STRN3Q13033 797 aa17.95■□□□□ 0.46
NEK9-204ENST00000554258 DNAJC3Q13217 504 aa17.95■□□□□ 0.46
NEK9-204ENST00000554258 TEAD4Q15561 434 aa17.95■□□□□ 0.46
NEK9-204ENST00000554258 FBXL19Q6PCT2 694 aa17.95■□□□□ 0.46
NEK9-204ENST00000554258 ATG14Q6ZNE5 492 aa17.95■□□□□ 0.46
NEK9-204ENST00000554258 KRBA2Q6ZNG9 492 aa17.95■□□□□ 0.46
NEK9-204ENST00000554258 ETFBKMTQ8IXQ9 262 aa17.95■□□□□ 0.46
NEK9-204ENST00000554258 SNX19Q92543 992 aa17.95■□□□□ 0.46
NEK9-204ENST00000554258 GABRG3Q99928 467 aa17.95■□□□□ 0.46
NEK9-204ENST00000554258 RUSC1Q9BVN2 902 aa17.95■□□□□ 0.46
NEK9-204ENST00000554258 TIPINQ9BVW5 301 aa17.95■□□□□ 0.46
NEK9-204ENST00000554258 CFAP97Q9P2B7 532 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms