RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 PROS1P07225 676 aa9.36□□□□□ -0.91
TDP1-208ENST00000553989 IRF1P10914 325 aa9.36□□□□□ -0.91
TDP1-208ENST00000553989 CEACAM1P13688 526 aa9.36□□□□□ -0.91
TDP1-208ENST00000553989 SPINK2P20155 84 aa9.36□□□□□ -0.91
TDP1-208ENST00000553989 ZNF75DP51815 510 aa9.36□□□□□ -0.91
TDP1-208ENST00000553989 MYL6P60660 151 aa9.36□□□□□ -0.91
TDP1-208ENST00000553989 PSMD6Q15008 389 aa9.36□□□□□ -0.91
TDP1-208ENST00000553989 STX1AQ16623 288 aa9.36□□□□□ -0.91
TDP1-208ENST00000553989 GAB4Q2WGN9 574 aa9.36□□□□□ -0.91
TDP1-208ENST00000553989 ZNF699Q32M78 642 aa9.36□□□□□ -0.91
TDP1-208ENST00000553989 LY6G5CQ5SRR4 150 aa9.36□□□□□ -0.91
TDP1-208ENST00000553989 C10orf76Q5T2E6 689 aa9.36□□□□□ -0.91
TDP1-208ENST00000553989 HECTD3Q5T447 861 aa9.36□□□□□ -0.91
TDP1-208ENST00000553989 EMC10Q5UCC4 262 aa9.36□□□□□ -0.91
TDP1-208ENST00000553989 KIAA1211LQ6NV74 962 aa9.36□□□□□ -0.91
TDP1-208ENST00000553989 RHBDF2Q6PJF5 856 aa9.36□□□□□ -0.91
TDP1-208ENST00000553989 SARM1Q6SZW1 724 aa9.36□□□□□ -0.91
TDP1-208ENST00000553989 SCARA5Q6ZMJ2 495 aa9.36□□□□□ -0.91
TDP1-208ENST00000553989 TRMT11Q7Z4G4 463 aaKnown RBP9.36□□□□□ -0.91
TDP1-208ENST00000553989 LIMS2Q7Z4I7 341 aa9.36□□□□□ -0.91
TDP1-208ENST00000553989 DRC7Q8IY82 874 aa9.36□□□□□ -0.91
TDP1-208ENST00000553989 ZNF513Q8N8E2 541 aaPredicted RBP9.36□□□□□ -0.91
TDP1-208ENST00000553989 KIAA1958Q8N8K9 716 aa9.36□□□□□ -0.91
TDP1-208ENST00000553989 IQUBQ8NA54 791 aa9.36□□□□□ -0.91
TDP1-208ENST00000553989 GTPBP2Q9BX10 602 aaKnown RBP9.36□□□□□ -0.91
TDP1-208ENST00000553989 TRIM5Q9C035 493 aa9.36□□□□□ -0.91
TDP1-208ENST00000553989 CUEDC2Q9H467 287 aa9.36□□□□□ -0.91
TDP1-208ENST00000553989 SMYD3Q9H7B4 428 aa9.36□□□□□ -0.91
TDP1-208ENST00000553989 CBX8Q9HC52 389 aa9.36□□□□□ -0.91
TDP1-208ENST00000553989 PAXBP1Q9Y5B6 917 aa9.36□□□□□ -0.91
TDP1-208ENST00000553989 THADAQ6YHU6 1953 aa9.35□□□□□ -0.91
TDP1-208ENST00000553989 E2F8A0AVK6 867 aa9.35□□□□□ -0.91
TDP1-208ENST00000553989 CDX4O14627 284 aaPredicted RBP9.35□□□□□ -0.91
TDP1-208ENST00000553989 TNFRSF10BO14763 440 aa9.35□□□□□ -0.91
TDP1-208ENST00000553989 AP5Z1O43299 807 aa9.35□□□□□ -0.91
TDP1-208ENST00000553989 COCHO43405 550 aa9.35□□□□□ -0.91
TDP1-208ENST00000553989 HOXB2P14652 356 aa9.35□□□□□ -0.91
TDP1-208ENST00000553989 HNRNPLP14866 589 aaKnown RBP eCLIP9.35□□□□□ -0.91
TDP1-208ENST00000553989 TRIM21P19474 475 aaKnown RBP9.35□□□□□ -0.91
TDP1-208ENST00000553989 CSRP1P21291 193 aaKnown RBP9.35□□□□□ -0.91
TDP1-208ENST00000553989 ATICP31939 592 aa9.35□□□□□ -0.91
TDP1-208ENST00000553989 P2RY2P41231 377 aa9.35□□□□□ -0.91
TDP1-208ENST00000553989 DPP6P42658 865 aa9.35□□□□□ -0.91
TDP1-208ENST00000553989 PTGER3P43115 390 aa9.35□□□□□ -0.91
TDP1-208ENST00000553989 TNFRSF4P43489 277 aa9.35□□□□□ -0.91
TDP1-208ENST00000553989 SLC5A3P53794 718 aa9.35□□□□□ -0.91
TDP1-208ENST00000553989 TPM4P67936 248 aa9.35□□□□□ -0.91
TDP1-208ENST00000553989 RPL6Q02878 288 aaKnown RBP9.35□□□□□ -0.91
TDP1-208ENST00000553989 MESP2Q0VG99 397 aa9.35□□□□□ -0.91
TDP1-208ENST00000553989 CAMK4Q16566 473 aa9.35□□□□□ -0.91
TDP1-208ENST00000553989 ANO6Q4KMQ2 910 aa9.35□□□□□ -0.91
TDP1-208ENST00000553989 ZNF667Q5HYK9 610 aa9.35□□□□□ -0.91
TDP1-208ENST00000553989 FAM35AQ86V20 835 aa9.35□□□□□ -0.91
TDP1-208ENST00000553989 SYT12Q8IV01 421 aa9.35□□□□□ -0.91
TDP1-208ENST00000553989 HDDC3Q8N4P3 179 aa9.35□□□□□ -0.91
TDP1-208ENST00000553989 DEFB119Q8N690 84 aa9.35□□□□□ -0.91
TDP1-208ENST00000553989 FRMD1Q8N878 549 aa9.35□□□□□ -0.91
TDP1-208ENST00000553989 LINC00301Q8NCQ3 95 aa9.35□□□□□ -0.91
TDP1-208ENST00000553989 ZNF507Q8TCN5 953 aa9.35□□□□□ -0.91
TDP1-208ENST00000553989 OVCA2Q8WZ82 227 aa9.35□□□□□ -0.91
TDP1-208ENST00000553989 OTUB2Q96DC9 234 aa9.35□□□□□ -0.91
TDP1-208ENST00000553989 ERLEC1Q96DZ1 483 aa9.35□□□□□ -0.91
TDP1-208ENST00000553989 SMARCD1Q96GM5 515 aa9.35□□□□□ -0.91
TDP1-208ENST00000553989 MRFAP1L1Q96HT8 127 aa9.35□□□□□ -0.91
TDP1-208ENST00000553989 TNIP3Q96KP6 325 aa9.35□□□□□ -0.91
TDP1-208ENST00000553989 KCNK16Q96T55 309 aa9.35□□□□□ -0.91
TDP1-208ENST00000553989 B3GNT5Q9BYG0 378 aa9.35□□□□□ -0.91
TDP1-208ENST00000553989 ADAM33Q9BZ11 813 aa9.35□□□□□ -0.91
TDP1-208ENST00000553989 BLZF1Q9H2G9 400 aa9.35□□□□□ -0.91
TDP1-208ENST00000553989 CCSER2Q9H7U1 834 aa9.35□□□□□ -0.91
TDP1-208ENST00000553989 DMAP1Q9NPF5 467 aaPredicted RBP9.35□□□□□ -0.91
TDP1-208ENST00000553989 KRT82Q9NSB4 513 aa9.35□□□□□ -0.91
TDP1-208ENST00000553989 KBTBD4Q9NVX7 518 aa9.35□□□□□ -0.91
TDP1-208ENST00000553989 GMIPQ9P107 970 aa9.35□□□□□ -0.91
TDP1-208ENST00000553989 DEC1Q9P2X7 70 aa9.35□□□□□ -0.91
TDP1-208ENST00000553989 CHORDC1Q9UHD1 332 aaPredicted RBP9.35□□□□□ -0.91
TDP1-208ENST00000553989 EVLQ9UI08 416 aaPredicted RBP9.35□□□□□ -0.91
TDP1-208ENST00000553989 RALYQ9UKM9 306 aaKnown RBP9.35□□□□□ -0.91
TDP1-208ENST00000553989 ZMIZ1Q9ULJ6 1067 aa9.35□□□□□ -0.91
TDP1-208ENST00000553989 NME7Q9Y5B8 376 aa9.35□□□□□ -0.91
TDP1-208ENST00000553989 ABCA7Q8IZY2 2146 aa9.35□□□□□ -0.91
TDP1-208ENST00000553989 NUP205Q92621 2012 aa9.34□□□□□ -0.91
TDP1-208ENST00000553989 SMTNL1A8MU46 457 aa9.34□□□□□ -0.91
TDP1-208ENST00000553989 BECN2A8MW95 431 aa9.34□□□□□ -0.91
TDP1-208ENST00000553989 NEDD8-MDP1E9PL57 170 aa9.34□□□□□ -0.91
TDP1-208ENST00000553989 TGFB1I1O43294 461 aa9.34□□□□□ -0.91
TDP1-208ENST00000553989 TULP3O75386 442 aa9.34□□□□□ -0.91
TDP1-208ENST00000553989 AP1G2O75843 785 aa9.34□□□□□ -0.91
TDP1-208ENST00000553989 YEATS4O95619 227 aa9.34□□□□□ -0.91
TDP1-208ENST00000553989 FAM163BP0C2L3 166 aa9.34□□□□□ -0.91
TDP1-208ENST00000553989 P4HA1P13674 534 aa9.34□□□□□ -0.91
TDP1-208ENST00000553989 ENGP17813 658 aa9.34□□□□□ -0.91
TDP1-208ENST00000553989 ITPKAP23677 461 aa9.34□□□□□ -0.91
TDP1-208ENST00000553989 HOXD13P35453 343 aa9.34□□□□□ -0.91
TDP1-208ENST00000553989 WASP42768 502 aa9.34□□□□□ -0.91
TDP1-208ENST00000553989 KIR2DL1P43626 348 aaPredicted RBP9.34□□□□□ -0.91
TDP1-208ENST00000553989 CASP4P49662 377 aa9.34□□□□□ -0.91
TDP1-208ENST00000553989 CDH8P55286 799 aa9.34□□□□□ -0.91
TDP1-208ENST00000553989 SNRPFP62306 86 aaKnown RBP9.34□□□□□ -0.91
TDP1-208ENST00000553989 GFPT1Q06210 699 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms