RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 RAB6BQ9NRW1 208 aa8.8□□□□□ -1
PSEN1-209ENST00000553855 TDP1Q9NUW8 608 aa8.8□□□□□ -1
PSEN1-209ENST00000553855 MRPS17Q9Y2R5 130 aaKnown RBP8.8□□□□□ -1
PSEN1-209ENST00000553855 NME7Q9Y5B8 376 aa8.8□□□□□ -1
PSEN1-209ENST00000553855 TTC28Q96AY4 2481 aa8.79□□□□□ -1
PSEN1-209ENST00000553855 REV3LO60673 3130 aa8.79□□□□□ -1
PSEN1-209ENST00000553855 MAN2B1O00754 1011 aa8.79□□□□□ -1
PSEN1-209ENST00000553855 CHADO15335 359 aa8.79□□□□□ -1
PSEN1-209ENST00000553855 NCAM2O15394 837 aa8.79□□□□□ -1
PSEN1-209ENST00000553855 NARSO43776 548 aaKnown RBP8.79□□□□□ -1
PSEN1-209ENST00000553855 LRRN2O75325 713 aa8.79□□□□□ -1
PSEN1-209ENST00000553855 RALAP11233 206 aa8.79□□□□□ -1
PSEN1-209ENST00000553855 TCF3P15923 654 aa8.79□□□□□ -1
PSEN1-209ENST00000553855 ACO1P21399 889 aaKnown RBP8.79□□□□□ -1
PSEN1-209ENST00000553855 IFNAR2P48551 515 aa8.79□□□□□ -1
PSEN1-209ENST00000553855 BCAT1P54687 386 aa8.79□□□□□ -1
PSEN1-209ENST00000553855 RAD23BP54727 409 aa8.79□□□□□ -1
PSEN1-209ENST00000553855 PSMA6P60900 246 aaKnown RBP8.79□□□□□ -1
PSEN1-209ENST00000553855 PRKCQQ04759 706 aa8.79□□□□□ -1
PSEN1-209ENST00000553855 TYRO3Q06418 890 aa8.79□□□□□ -1
PSEN1-209ENST00000553855 GRM2Q14416 872 aa8.79□□□□□ -1
PSEN1-209ENST00000553855 ZNF268Q14587 947 aaPredicted RBP8.79□□□□□ -1
PSEN1-209ENST00000553855 ARHGAP44Q17R89 818 aa8.79□□□□□ -1
PSEN1-209ENST00000553855 GOLGA7BQ2TAP0 167 aa8.79□□□□□ -1
PSEN1-209ENST00000553855 TCP11X2Q5H9J9 407 aa8.79□□□□□ -1
PSEN1-209ENST00000553855 HECTD3Q5T447 861 aa8.79□□□□□ -1
PSEN1-209ENST00000553855 STXBP5Q5T5C0 1151 aa8.79□□□□□ -1
PSEN1-209ENST00000553855 ARHGAP17Q68EM7 881 aa8.79□□□□□ -1
PSEN1-209ENST00000553855 ALKBH2Q6NS38 261 aa8.79□□□□□ -1
PSEN1-209ENST00000553855 C1orf228Q6PIY5 440 aa8.79□□□□□ -1
PSEN1-209ENST00000553855 ARHGAP18Q8N392 663 aa8.79□□□□□ -1
PSEN1-209ENST00000553855 FBXL6Q8N531 539 aa8.79□□□□□ -1
PSEN1-209ENST00000553855 ANKRD52Q8NB46 1076 aa8.79□□□□□ -1
PSEN1-209ENST00000553855 SLC4A11Q8NBS3 891 aa8.79□□□□□ -1
PSEN1-209ENST00000553855 RBBP8NLQ8NC74 664 aaPredicted RBP8.79□□□□□ -1
PSEN1-209ENST00000553855 GOLGA1Q92805 767 aa8.79□□□□□ -1
PSEN1-209ENST00000553855 MSANTD3Q96H12 275 aa8.79□□□□□ -1
PSEN1-209ENST00000553855 ZSWIM3Q96MP5 696 aa8.79□□□□□ -1
PSEN1-209ENST00000553855 CITED4Q96RK1 184 aa8.79□□□□□ -1
PSEN1-209ENST00000553855 TWNKQ96RR1 684 aa8.79□□□□□ -1
PSEN1-209ENST00000553855 CDK5RAP1Q96SZ6 601 aaKnown RBP8.79□□□□□ -1
PSEN1-209ENST00000553855 PRRX2Q99811 253 aa8.79□□□□□ -1
PSEN1-209ENST00000553855 TTLL2Q9BWV7 592 aa8.79□□□□□ -1
PSEN1-209ENST00000553855 SLC46A2Q9BY10 475 aa8.79□□□□□ -1
PSEN1-209ENST00000553855 UBXN6Q9BZV1 441 aa8.79□□□□□ -1
PSEN1-209ENST00000553855 PDCL3Q9H2J4 239 aa8.79□□□□□ -1
PSEN1-209ENST00000553855 LRRC4Q9HBW1 653 aa8.79□□□□□ -1
PSEN1-209ENST00000553855 CSNK1G1Q9HCP0 422 aa8.79□□□□□ -1
PSEN1-209ENST00000553855 ARHGEF3Q9NR81 526 aa8.79□□□□□ -1
PSEN1-209ENST00000553855 SAMSN1Q9NSI8 373 aaKnown RBP8.79□□□□□ -1
PSEN1-209ENST00000553855 TMEM63CQ9P1W3 806 aa8.79□□□□□ -1
PSEN1-209ENST00000553855 APEX2Q9UBZ4 518 aa8.79□□□□□ -1
PSEN1-209ENST00000553855 C2orf16Q68DN1 1984 aa8.79□□□□□ -1
PSEN1-209ENST00000553855 ZNF840PA6NDX5 716 aa8.78□□□□□ -1
PSEN1-209ENST00000553855 NRG2O14511 850 aaPredicted RBP8.78□□□□□ -1
PSEN1-209ENST00000553855 CDK2AP1O14519 115 aa8.78□□□□□ -1
PSEN1-209ENST00000553855 TNFRSF10BO14763 440 aa8.78□□□□□ -1
PSEN1-209ENST00000553855 IL2RAP01589 272 aa8.78□□□□□ -1
PSEN1-209ENST00000553855 SETSIPP0DME0 302 aa8.78□□□□□ -1
PSEN1-209ENST00000553855 MBL2P11226 248 aaPredicted RBP8.78□□□□□ -1
PSEN1-209ENST00000553855 SNX16P57768 344 aa8.78□□□□□ -1
PSEN1-209ENST00000553855 BPIFB4P59827 614 aa8.78□□□□□ -1
PSEN1-209ENST00000553855 BST2Q10589 180 aaKnown RBP8.78□□□□□ -1
PSEN1-209ENST00000553855 PDGFRLQ15198 375 aa8.78□□□□□ -1
PSEN1-209ENST00000553855 MLF2Q15773 248 aaPredicted RBP8.78□□□□□ -1
PSEN1-209ENST00000553855 FILIP1LQ4L180 1135 aa8.78□□□□□ -1
PSEN1-209ENST00000553855 SLC44A4Q53GD3 710 aa8.78□□□□□ -1
PSEN1-209ENST00000553855 COX20Q5RI15 118 aa8.78□□□□□ -1
PSEN1-209ENST00000553855 TRIM65Q6PJ69 517 aa8.78□□□□□ -1
PSEN1-209ENST00000553855 VITQ6UXI7 678 aa8.78□□□□□ -1
PSEN1-209ENST00000553855 ZNF852Q6ZMS4 543 aa8.78□□□□□ -1
PSEN1-209ENST00000553855 Q6ZNB5 142 aa8.78□□□□□ -1
PSEN1-209ENST00000553855 CLEC20AQ6ZU45 233 aa8.78□□□□□ -1
PSEN1-209ENST00000553855 HFE2Q6ZVN8 426 aa8.78□□□□□ -1
PSEN1-209ENST00000553855 PAQR9Q6ZVX9 377 aa8.78□□□□□ -1
PSEN1-209ENST00000553855 ARHGEF19Q8IW93 802 aa8.78□□□□□ -1
PSEN1-209ENST00000553855 SIX6OS1Q8N1H7 587 aa8.78□□□□□ -1
PSEN1-209ENST00000553855 ARL14EPQ8N8R7 260 aaPredicted RBP8.78□□□□□ -1
PSEN1-209ENST00000553855 WHAMMQ8TF30 809 aa8.78□□□□□ -1
PSEN1-209ENST00000553855 ASIC4Q96FT7 647 aa8.78□□□□□ -1
PSEN1-209ENST00000553855 NELL2Q99435 816 aa8.78□□□□□ -1
PSEN1-209ENST00000553855 SMOQ99835 787 aa8.78□□□□□ -1
PSEN1-209ENST00000553855 RPP25Q9BUL9 199 aaKnown RBP8.78□□□□□ -1
PSEN1-209ENST00000553855 VPS16Q9H269 839 aa8.78□□□□□ -1
PSEN1-209ENST00000553855 C8orf33Q9H7E9 229 aaPredicted RBP8.78□□□□□ -1
PSEN1-209ENST00000553855 TAB2Q9NYJ8 693 aa8.78□□□□□ -1
PSEN1-209ENST00000553855 STIM2Q9P246 746 aa8.78□□□□□ -1
PSEN1-209ENST00000553855 CHORDC1Q9UHD1 332 aaPredicted RBP8.78□□□□□ -1
PSEN1-209ENST00000553855 TSPAN16Q9UKR8 245 aa8.78□□□□□ -1
PSEN1-209ENST00000553855 CEP83Q9Y592 693 aa8.78□□□□□ -1
PSEN1-209ENST00000553855 DENND4AQ7Z401 1863 aa8.78□□□□□ -1
PSEN1-209ENST00000553855 C2orf78A6NCI8 922 aa8.77□□□□□ -1.01
PSEN1-209ENST00000553855 GOLGA6L19H0YKK7 550 aa8.77□□□□□ -1.01
PSEN1-209ENST00000553855 M0QYV0 167 aa8.77□□□□□ -1.01
PSEN1-209ENST00000553855 SLC9A3R1O14745 358 aaPredicted RBP8.77□□□□□ -1.01
PSEN1-209ENST00000553855 XPO1O14980 1071 aaKnown RBP8.77□□□□□ -1.01
PSEN1-209ENST00000553855 THAP12O43422 761 aa8.77□□□□□ -1.01
PSEN1-209ENST00000553855 CAVIN2O95810 425 aa8.77□□□□□ -1.01
PSEN1-209ENST00000553855 GLULP15104 373 aa8.77□□□□□ -1.01
PSEN1-209ENST00000553855 SLC9A1P19634 815 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms