RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 SPATA6Q9NWH7 488 aaPredicted RBP21.4■■□□□ 1.02
FOXA1-203ENST00000553751 DNAJC12Q9UKB3 198 aa21.4■■□□□ 1.02
FOXA1-203ENST00000553751 SH3BP1Q9Y3L3 701 aa21.4■■□□□ 1.02
FOXA1-203ENST00000553751 PES1O00541 588 aaKnown RBP21.39■■□□□ 1.01
FOXA1-203ENST00000553751 TRDMT1O14717 391 aaKnown RBP21.39■■□□□ 1.01
FOXA1-203ENST00000553751 LETM1O95202 739 aaPredicted RBP21.39■■□□□ 1.01
FOXA1-203ENST00000553751 RALAP11233 206 aa21.39■■□□□ 1.01
FOXA1-203ENST00000553751 GNA15P30679 374 aa21.39■■□□□ 1.01
FOXA1-203ENST00000553751 RGS7P49802 495 aa21.39■■□□□ 1.01
FOXA1-203ENST00000553751 YWHAGP61981 247 aaKnown RBP eCLIP21.39■■□□□ 1.01
FOXA1-203ENST00000553751 AMPD2Q01433 879 aa21.39■■□□□ 1.01
FOXA1-203ENST00000553751 MTAPQ13126 283 aa21.39■■□□□ 1.01
FOXA1-203ENST00000553751 NCAPHQ15003 741 aa21.39■■□□□ 1.01
FOXA1-203ENST00000553751 MEA1Q16626 185 aa21.39■■□□□ 1.01
FOXA1-203ENST00000553751 GAB4Q2WGN9 574 aa21.39■■□□□ 1.01
FOXA1-203ENST00000553751 TMEM196Q5HYL7 178 aa21.39■■□□□ 1.01
FOXA1-203ENST00000553751 SMYD5Q6GMV2 418 aa21.39■■□□□ 1.01
FOXA1-203ENST00000553751 FSTL4Q6MZW2 842 aa21.39■■□□□ 1.01
FOXA1-203ENST00000553751 TADA2BQ86TJ2 420 aa21.39■■□□□ 1.01
FOXA1-203ENST00000553751 ADGRG2Q8IZP9 1017 aa21.39■■□□□ 1.01
FOXA1-203ENST00000553751 SIX6OS1Q8N1H7 587 aa21.39■■□□□ 1.01
FOXA1-203ENST00000553751 SCML4Q8N228 414 aa21.39■■□□□ 1.01
FOXA1-203ENST00000553751 NDRG1Q92597 394 aaKnown RBP21.39■■□□□ 1.01
FOXA1-203ENST00000553751 ATOH1Q92858 354 aaPredicted RBP21.39■■□□□ 1.01
FOXA1-203ENST00000553751 CDK5RAP1Q96SZ6 601 aaKnown RBP21.39■■□□□ 1.01
FOXA1-203ENST00000553751 IER2Q9BTL4 223 aa21.39■■□□□ 1.01
FOXA1-203ENST00000553751 TBC1D14Q9P2M4 693 aa21.39■■□□□ 1.01
FOXA1-203ENST00000553751 DNMT3LQ9UJW3 386 aa21.39■■□□□ 1.01
FOXA1-203ENST00000553751 PIEZO1Q92508 2521 aa21.38■■□□□ 1.01
FOXA1-203ENST00000553751 MYO15AQ9UKN7 3530 aa21.38■■□□□ 1.01
FOXA1-203ENST00000553751 LCP1P13796 627 aa21.38■■□□□ 1.01
FOXA1-203ENST00000553751 USP8P40818 1118 aa21.38■■□□□ 1.01
FOXA1-203ENST00000553751 GPD2P43304 727 aa21.38■■□□□ 1.01
FOXA1-203ENST00000553751 NR1H3Q13133 447 aa21.38■■□□□ 1.01
FOXA1-203ENST00000553751 GAS6Q14393 721 aa21.38■■□□□ 1.01
FOXA1-203ENST00000553751 DGKKQ5KSL6 1271 aa21.38■■□□□ 1.01
FOXA1-203ENST00000553751 Q6ZS52 159 aa21.38■■□□□ 1.01
FOXA1-203ENST00000553751 BBS7Q8IWZ6 715 aa21.38■■□□□ 1.01
FOXA1-203ENST00000553751 ZNF606Q8WXB4 792 aa21.38■■□□□ 1.01
FOXA1-203ENST00000553751 OTUB2Q96DC9 234 aa21.38■■□□□ 1.01
FOXA1-203ENST00000553751 PHOX2BQ99453 314 aa21.38■■□□□ 1.01
FOXA1-203ENST00000553751 HSD3B7Q9H2F3 369 aa21.38■■□□□ 1.01
FOXA1-203ENST00000553751 FBRSL1Q9HCM7 1045 aaKnown RBP21.38■■□□□ 1.01
FOXA1-203ENST00000553751 CNGB3Q9NQW8 809 aa21.38■■□□□ 1.01
FOXA1-203ENST00000553751 DMDP11532 3685 aa21.37■■□□□ 1.01
FOXA1-203ENST00000553751 YJEFN3A6XGL0 299 aa21.37■■□□□ 1.01
FOXA1-203ENST00000553751 E7ENQ6 273 aa21.37■■□□□ 1.01
FOXA1-203ENST00000553751 THAP12O43422 761 aa21.37■■□□□ 1.01
FOXA1-203ENST00000553751 MED7O43513 233 aa21.37■■□□□ 1.01
FOXA1-203ENST00000553751 PNMA6AP0CW24 399 aaPredicted RBP21.37■■□□□ 1.01
FOXA1-203ENST00000553751 ZNF18P17022 549 aa21.37■■□□□ 1.01
FOXA1-203ENST00000553751 RPL34P49207 117 aaKnown RBP21.37■■□□□ 1.01
FOXA1-203ENST00000553751 DAOAP59103 153 aa21.37■■□□□ 1.01
FOXA1-203ENST00000553751 DHCR24Q15392 516 aa21.37■■□□□ 1.01
FOXA1-203ENST00000553751 KLHL40Q2TBA0 621 aa21.37■■□□□ 1.01
FOXA1-203ENST00000553751 ANO6Q4KMQ2 910 aa21.37■■□□□ 1.01
FOXA1-203ENST00000553751 KLHDC7AQ5VTJ3 777 aa21.37■■□□□ 1.01
FOXA1-203ENST00000553751 DENND1BQ6P3S1 775 aa21.37■■□□□ 1.01
FOXA1-203ENST00000553751 RHBDF2Q6PJF5 856 aa21.37■■□□□ 1.01
FOXA1-203ENST00000553751 HTR3DQ70Z44 454 aa21.37■■□□□ 1.01
FOXA1-203ENST00000553751 MIB1Q86YT6 1006 aa21.37■■□□□ 1.01
FOXA1-203ENST00000553751 HSFY1Q96LI6 401 aa21.37■■□□□ 1.01
FOXA1-203ENST00000553751 P2RY13Q9BPV8 354 aa21.37■■□□□ 1.01
FOXA1-203ENST00000553751 LSM14BQ9BX40 385 aaKnown RBP21.37■■□□□ 1.01
FOXA1-203ENST00000553751 VPS16Q9H269 839 aa21.37■■□□□ 1.01
FOXA1-203ENST00000553751 PRMT8Q9NR22 394 aaPredicted RBP21.37■■□□□ 1.01
FOXA1-203ENST00000553751 FHOD1Q9Y613 1164 aa21.37■■□□□ 1.01
FOXA1-203ENST00000553751 PIK3R2O00459 728 aa21.36■■□□□ 1.01
FOXA1-203ENST00000553751 LAMTOR5O43504 91 aa21.36■■□□□ 1.01
FOXA1-203ENST00000553751 OPRD1P41143 372 aa21.36■■□□□ 1.01
FOXA1-203ENST00000553751 GALK1P51570 392 aa21.36■■□□□ 1.01
FOXA1-203ENST00000553751 GOLGA8FQ08AF8 430 aa21.36■■□□□ 1.01
FOXA1-203ENST00000553751 GOLGA8DPQ0D2H9 430 aa21.36■■□□□ 1.01
FOXA1-203ENST00000553751 EFEMP1Q12805 493 aa21.36■■□□□ 1.01
FOXA1-203ENST00000553751 GRSF1Q12849 480 aaKnown RBP eCLIP21.36■■□□□ 1.01
FOXA1-203ENST00000553751 MAMSTRQ6ZN01 415 aa21.36■■□□□ 1.01
FOXA1-203ENST00000553751 SYNPOQ8N3V7 929 aa21.36■■□□□ 1.01
FOXA1-203ENST00000553751 AOPEPQ8N6M6 819 aa21.36■■□□□ 1.01
FOXA1-203ENST00000553751 CD101Q93033 1021 aa21.36■■□□□ 1.01
FOXA1-203ENST00000553751 NAA15Q9BXJ9 866 aaKnown RBP21.36■■□□□ 1.01
FOXA1-203ENST00000553751 LIMA1Q9UHB6 759 aaKnown RBP21.36■■□□□ 1.01
FOXA1-203ENST00000553751 RASAL2Q9UJF2 1139 aa21.36■■□□□ 1.01
FOXA1-203ENST00000553751 FOXN3O00409 490 aaPredicted RBP21.35■■□□□ 1.01
FOXA1-203ENST00000553751 ADH1CP00326 375 aa21.35■■□□□ 1.01
FOXA1-203ENST00000553751 EGFP01133 1207 aa21.35■■□□□ 1.01
FOXA1-203ENST00000553751 SP9P0CG40 484 aa21.35■■□□□ 1.01
FOXA1-203ENST00000553751 COPB1P53618 953 aaKnown RBP21.35■■□□□ 1.01
FOXA1-203ENST00000553751 BTBD8Q5XKL5 378 aa21.35■■□□□ 1.01
FOXA1-203ENST00000553751 Q6ZNB5 142 aa21.35■■□□□ 1.01
FOXA1-203ENST00000553751 RSRC2Q7L4I2 434 aaKnown RBP21.35■■□□□ 1.01
FOXA1-203ENST00000553751 FAM71AQ8IYT1 594 aa21.35■■□□□ 1.01
FOXA1-203ENST00000553751 CLEC4CQ8WTT0 213 aa21.35■■□□□ 1.01
FOXA1-203ENST00000553751 IRGQQ8WZA9 623 aa21.35■■□□□ 1.01
FOXA1-203ENST00000553751 EZH1Q92800 747 aaPredicted RBP21.35■■□□□ 1.01
FOXA1-203ENST00000553751 BPIFA3Q9BQP9 254 aa21.35■■□□□ 1.01
FOXA1-203ENST00000553751 CYTH4Q9UIA0 394 aa21.35■■□□□ 1.01
FOXA1-203ENST00000553751 LSM7Q9UK45 103 aaKnown RBP21.35■■□□□ 1.01
FOXA1-203ENST00000553751 FBXO4Q9UKT5 387 aa21.35■■□□□ 1.01
FOXA1-203ENST00000553751 STC2O76061 302 aa21.34■■□□□ 1.01
FOXA1-203ENST00000553751 TPM2P07951 284 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms