RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 FOXO6A8MYZ6 492 aa13.43□□□□□ -0.26
SHMT2-205ENST00000553474 H7C0C1 242 aa13.43□□□□□ -0.26
SHMT2-205ENST00000553474 ATP6V1G2O95670 118 aa13.43□□□□□ -0.26
SHMT2-205ENST00000553474 IL1BP01584 269 aa13.43□□□□□ -0.26
SHMT2-205ENST00000553474 CYP3A5P20815 502 aa13.43□□□□□ -0.26
SHMT2-205ENST00000553474 PNPLA4P41247 253 aa13.43□□□□□ -0.26
SHMT2-205ENST00000553474 ACADSBP45954 432 aa13.43□□□□□ -0.26
SHMT2-205ENST00000553474 ATP5OP48047 213 aa13.43□□□□□ -0.26
SHMT2-205ENST00000553474 RPL34P49207 117 aaKnown RBP13.43□□□□□ -0.26
SHMT2-205ENST00000553474 BCAR1P56945 870 aa13.43□□□□□ -0.26
SHMT2-205ENST00000553474 ZNF200P98182 395 aaPredicted RBP13.43□□□□□ -0.26
SHMT2-205ENST00000553474 DNAJC3Q13217 504 aa13.43□□□□□ -0.26
SHMT2-205ENST00000553474 ORC1Q13415 861 aa13.43□□□□□ -0.26
SHMT2-205ENST00000553474 GRB14Q14449 540 aa13.43□□□□□ -0.26
SHMT2-205ENST00000553474 MARCH8Q5T0T0 291 aa13.43□□□□□ -0.26
SHMT2-205ENST00000553474 WLSQ5T9L3 541 aa13.43□□□□□ -0.26
SHMT2-205ENST00000553474 IQSEC1Q6DN90 963 aa13.43□□□□□ -0.26
SHMT2-205ENST00000553474 NOTUMQ6P988 496 aa13.43□□□□□ -0.26
SHMT2-205ENST00000553474 LVRNQ6Q4G3 990 aa13.43□□□□□ -0.26
SHMT2-205ENST00000553474 SLC26A9Q7LBE3 791 aa13.43□□□□□ -0.26
SHMT2-205ENST00000553474 CHSY1Q86X52 802 aa13.43□□□□□ -0.26
SHMT2-205ENST00000553474 CDKL3Q8IVW4 592 aaPredicted RBP13.43□□□□□ -0.26
SHMT2-205ENST00000553474 C4orf33Q8N1A6 199 aa13.43□□□□□ -0.26
SHMT2-205ENST00000553474 ZBTB10Q96DT7 871 aa13.43□□□□□ -0.26
SHMT2-205ENST00000553474 SNX27Q96L92 541 aa13.43□□□□□ -0.26
SHMT2-205ENST00000553474 ABHD16BQ9H3Z7 469 aa13.43□□□□□ -0.26
SHMT2-205ENST00000553474 CNTN3Q9P232 1028 aa13.43□□□□□ -0.26
SHMT2-205ENST00000553474 CD4P01730 458 aa13.43□□□□□ -0.26
SHMT2-205ENST00000553474 INHBAP08476 426 aa13.43□□□□□ -0.26
SHMT2-205ENST00000553474 EZRP15311 586 aaKnown RBP13.43□□□□□ -0.26
SHMT2-205ENST00000553474 CYP2B6P20813 491 aa13.43□□□□□ -0.26
SHMT2-205ENST00000553474 IL4RP24394 825 aa13.43□□□□□ -0.26
SHMT2-205ENST00000553474 PRKCZQ05513 592 aa13.43□□□□□ -0.26
SHMT2-205ENST00000553474 ADCY1Q08828 1119 aa13.43□□□□□ -0.26
SHMT2-205ENST00000553474 TAF5Q15542 800 aa13.43□□□□□ -0.26
SHMT2-205ENST00000553474 DPYSL2Q16555 572 aa13.43□□□□□ -0.26
SHMT2-205ENST00000553474 HP1BP3Q5SSJ5 553 aaPredicted RBP13.43□□□□□ -0.26
SHMT2-205ENST00000553474 PPP1R26Q5T8A7 1209 aaPredicted RBP13.43□□□□□ -0.26
SHMT2-205ENST00000553474 TRNP1Q6NT89 227 aa13.43□□□□□ -0.26
SHMT2-205ENST00000553474 BZW1Q7L1Q6 419 aaKnown RBP13.43□□□□□ -0.26
SHMT2-205ENST00000553474 CCDC91Q7Z6B0 441 aa13.43□□□□□ -0.26
SHMT2-205ENST00000553474 ECHDC2Q86YB7 292 aa13.43□□□□□ -0.26
SHMT2-205ENST00000553474 PSTKQ8IV42 348 aaKnown RBP13.43□□□□□ -0.26
SHMT2-205ENST00000553474 FAM172AQ8WUF8 416 aa13.43□□□□□ -0.26
SHMT2-205ENST00000553474 INPP5DQ92835 1189 aa13.43□□□□□ -0.26
SHMT2-205ENST00000553474 WDR83Q9BRX9 315 aaKnown RBP13.43□□□□□ -0.26
SHMT2-205ENST00000553474 PCDH18Q9HCL0 1135 aa13.43□□□□□ -0.26
SHMT2-205ENST00000553474 RCOR3Q9P2K3 495 aaPredicted RBP13.43□□□□□ -0.26
SHMT2-205ENST00000553474 UBQLN1Q9UMX0 589 aaKnown RBP13.43□□□□□ -0.26
SHMT2-205ENST00000553474 NRCAMQ92823 1304 aa13.42□□□□□ -0.26
SHMT2-205ENST00000553474 A0A1W2PPM1 405 aa13.42□□□□□ -0.26
SHMT2-205ENST00000553474 TCRBV9S1A1TA0A576 114 aa13.42□□□□□ -0.26
SHMT2-205ENST00000553474 C2CD2LO14523 706 aa13.42□□□□□ -0.26
SHMT2-205ENST00000553474 CSDE1O75534 798 aaKnown RBP13.42□□□□□ -0.26
SHMT2-205ENST00000553474 TGDSO95455 350 aa13.42□□□□□ -0.26
SHMT2-205ENST00000553474 ZBED1O96006 694 aa13.42□□□□□ -0.26
SHMT2-205ENST00000553474 MT-ND3P03897 115 aa13.42□□□□□ -0.26
SHMT2-205ENST00000553474 MMP3P08254 477 aa13.42□□□□□ -0.26
SHMT2-205ENST00000553474 ZNF286BP0CG31 522 aa13.42□□□□□ -0.26
SHMT2-205ENST00000553474 TROVE2P10155 538 aaKnown RBP eCLIP13.42□□□□□ -0.26
SHMT2-205ENST00000553474 ADCYAP1R1P41586 468 aa13.42□□□□□ -0.26
SHMT2-205ENST00000553474 ELK3P41970 407 aa13.42□□□□□ -0.26
SHMT2-205ENST00000553474 BCAT1P54687 386 aa13.42□□□□□ -0.26
SHMT2-205ENST00000553474 SLC18A2Q05940 514 aa13.42□□□□□ -0.26
SHMT2-205ENST00000553474 BST2Q10589 180 aaKnown RBP13.42□□□□□ -0.26
SHMT2-205ENST00000553474 MAP2K5Q13163 448 aa13.42□□□□□ -0.26
SHMT2-205ENST00000553474 SLC1A5Q15758 541 aa13.42□□□□□ -0.26
SHMT2-205ENST00000553474 PARP6Q2NL67 630 aa13.42□□□□□ -0.26
SHMT2-205ENST00000553474 C15orf59Q2T9L4 293 aaPredicted RBP13.42□□□□□ -0.26
SHMT2-205ENST00000553474 PREPLQ4J6C6 727 aaPredicted RBP13.42□□□□□ -0.26
SHMT2-205ENST00000553474 SLC45A4Q5BKX6 768 aa13.42□□□□□ -0.26
SHMT2-205ENST00000553474 MORN1Q5T089 497 aa13.42□□□□□ -0.26
SHMT2-205ENST00000553474 PMF1Q6P1K2 205 aa13.42□□□□□ -0.26
SHMT2-205ENST00000553474 ALKAL1Q6UXT8 129 aa13.42□□□□□ -0.26
SHMT2-205ENST00000553474 CAPN12Q6ZSI9 719 aa13.42□□□□□ -0.26
SHMT2-205ENST00000553474 TBC1D1Q86TI0 1168 aaPredicted RBP13.42□□□□□ -0.26
SHMT2-205ENST00000553474 ZC3H18Q86VM9 953 aaKnown RBP13.42□□□□□ -0.26
SHMT2-205ENST00000553474 SLC26A11Q86WA9 606 aa13.42□□□□□ -0.26
SHMT2-205ENST00000553474 TTC30AQ86WT1 665 aa13.42□□□□□ -0.26
SHMT2-205ENST00000553474 HACE1Q8IYU2 909 aa13.42□□□□□ -0.26
SHMT2-205ENST00000553474 CRYBG2Q8N1P7 616 aa13.42□□□□□ -0.26
SHMT2-205ENST00000553474 ANKRD52Q8NB46 1076 aa13.42□□□□□ -0.26
SHMT2-205ENST00000553474 SOCS4Q8WXH5 440 aa13.42□□□□□ -0.26
SHMT2-205ENST00000553474 ZNF75CPQ92670 426 aaPredicted RBP13.42□□□□□ -0.26
SHMT2-205ENST00000553474 CENPIQ92674 756 aaPredicted RBP13.42□□□□□ -0.26
SHMT2-205ENST00000553474 RMDN2Q96LZ7 410 aa13.42□□□□□ -0.26
SHMT2-205ENST00000553474 ZNF560Q96MR9 790 aa13.42□□□□□ -0.26
SHMT2-205ENST00000553474 ADAMTS10Q9H324 1103 aa13.42□□□□□ -0.26
SHMT2-205ENST00000553474 KIF9Q9HAQ2 790 aa13.42□□□□□ -0.26
SHMT2-205ENST00000553474 GABRQQ9UN88 632 aa13.42□□□□□ -0.26
SHMT2-205ENST00000553474 SNX9Q9Y5X1 595 aa13.42□□□□□ -0.26
SHMT2-205ENST00000553474 SMIM35A0A1B0GVV1 85 aa13.41□□□□□ -0.26
SHMT2-205ENST00000553474 TCRBV7S3A2A0A539 114 aa13.41□□□□□ -0.26
SHMT2-205ENST00000553474 GCATO75600 419 aa13.41□□□□□ -0.26
SHMT2-205ENST00000553474 KRT37O76014 449 aa13.41□□□□□ -0.26
SHMT2-205ENST00000553474 SNAI1O95863 264 aaPredicted RBP13.41□□□□□ -0.26
SHMT2-205ENST00000553474 FAM163BP0C2L3 166 aa13.41□□□□□ -0.26
SHMT2-205ENST00000553474 TPSB2P20231 275 aa13.41□□□□□ -0.26
SHMT2-205ENST00000553474 HOXA11P31270 313 aaPredicted RBP13.41□□□□□ -0.26
SHMT2-205ENST00000553474 RGS2P41220 211 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms