RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 PEX12O00623 359 aa6.39□□□□□ -1.39
SCFD1-208ENST00000553278 HLA-DOAP06340 250 aa6.39□□□□□ -1.39
SCFD1-208ENST00000553278 EPHA3P29320 983 aa6.39□□□□□ -1.39
SCFD1-208ENST00000553278 UQCRC1P31930 480 aa6.39□□□□□ -1.39
SCFD1-208ENST00000553278 GSTM5P46439 218 aa6.39□□□□□ -1.39
SCFD1-208ENST00000553278 TAP2Q03519 686 aa6.39□□□□□ -1.39
SCFD1-208ENST00000553278 TBL3Q12788 808 aaKnown RBP6.39□□□□□ -1.39
SCFD1-208ENST00000553278 MPP3Q13368 585 aa6.39□□□□□ -1.39
SCFD1-208ENST00000553278 WTAPQ15007 396 aa6.39□□□□□ -1.39
SCFD1-208ENST00000553278 ARHGAP40Q5TG30 622 aa6.39□□□□□ -1.39
SCFD1-208ENST00000553278 MSANTD2Q6P1R3 559 aa6.39□□□□□ -1.39
SCFD1-208ENST00000553278 KLHL24Q6TFL4 600 aa6.39□□□□□ -1.39
SCFD1-208ENST00000553278 CLEC9AQ6UXN8 241 aa6.39□□□□□ -1.39
SCFD1-208ENST00000553278 SYNE3Q6ZMZ3 975 aa6.39□□□□□ -1.39
SCFD1-208ENST00000553278 NKAIN3Q8N8D7 197 aa6.39□□□□□ -1.39
SCFD1-208ENST00000553278 TMEM171Q8WVE6 324 aa6.39□□□□□ -1.39
SCFD1-208ENST00000553278 REXO5Q96IC2 774 aaKnown RBP6.39□□□□□ -1.39
SCFD1-208ENST00000553278 ZBTB45Q96K62 511 aaPredicted RBP6.39□□□□□ -1.39
SCFD1-208ENST00000553278 ASB2Q96Q27 587 aa6.39□□□□□ -1.39
SCFD1-208ENST00000553278 MECRQ9BV79 373 aa6.39□□□□□ -1.39
SCFD1-208ENST00000553278 ALDH8A1Q9H2A2 487 aaPredicted RBP6.39□□□□□ -1.39
SCFD1-208ENST00000553278 SMOC2Q9H3U7 446 aa6.39□□□□□ -1.39
SCFD1-208ENST00000553278 RMI1Q9H9A7 625 aa6.39□□□□□ -1.39
SCFD1-208ENST00000553278 PLEKHA2Q9HB19 425 aa6.39□□□□□ -1.39
SCFD1-208ENST00000553278 VEZTQ9HBM0 779 aa6.39□□□□□ -1.39
SCFD1-208ENST00000553278 ADD3Q9UEY8 706 aaKnown RBP6.39□□□□□ -1.39
SCFD1-208ENST00000553278 SUFUQ9UMX1 484 aa6.39□□□□□ -1.39
SCFD1-208ENST00000553278 CAMK2AQ9UQM7 478 aa6.39□□□□□ -1.39
SCFD1-208ENST00000553278 COL15A1P39059 1388 aa6.39□□□□□ -1.39
SCFD1-208ENST00000553278 ZNF503-AS2A6NEH8 195 aa6.38□□□□□ -1.39
SCFD1-208ENST00000553278 SLC38A8A6NNN8 435 aa6.38□□□□□ -1.39
SCFD1-208ENST00000553278 TOR1BO14657 336 aa6.38□□□□□ -1.39
SCFD1-208ENST00000553278 DKC1O60832 514 aaKnown RBP eCLIP6.38□□□□□ -1.39
SCFD1-208ENST00000553278 IPO13O94829 963 aaKnown RBP6.38□□□□□ -1.39
SCFD1-208ENST00000553278 DNTTP04053 509 aa6.38□□□□□ -1.39
SCFD1-208ENST00000553278 CLEC3BP05452 202 aa6.38□□□□□ -1.39
SCFD1-208ENST00000553278 TNNT1P13805 278 aa6.38□□□□□ -1.39
SCFD1-208ENST00000553278 GGT5P36269 586 aa6.38□□□□□ -1.39
SCFD1-208ENST00000553278 MLH1P40692 756 aa6.38□□□□□ -1.39
SCFD1-208ENST00000553278 MTHFSP49914 203 aa6.38□□□□□ -1.39
SCFD1-208ENST00000553278 DLX2Q07687 328 aaPredicted RBP6.38□□□□□ -1.39
SCFD1-208ENST00000553278 CLCA4Q14CN2 919 aa6.38□□□□□ -1.39
SCFD1-208ENST00000553278 TBCEQ15813 527 aaPredicted RBP6.38□□□□□ -1.39
SCFD1-208ENST00000553278 CSRP2Q16527 193 aa6.38□□□□□ -1.39
SCFD1-208ENST00000553278 NRN1LQ496H8 165 aa6.38□□□□□ -1.39
SCFD1-208ENST00000553278 METTL24Q5JXM2 366 aa6.38□□□□□ -1.39
SCFD1-208ENST00000553278 CBWD5Q5RIA9 395 aa6.38□□□□□ -1.39
SCFD1-208ENST00000553278 RGS7BPQ6MZT1 257 aaPredicted RBP6.38□□□□□ -1.39
SCFD1-208ENST00000553278 KBTBD2Q8IY47 623 aa6.38□□□□□ -1.39
SCFD1-208ENST00000553278 ADSSL1Q8N142 457 aa6.38□□□□□ -1.39
SCFD1-208ENST00000553278 GALNT4Q8N4A0 578 aa6.38□□□□□ -1.39
SCFD1-208ENST00000553278 LINS1Q8NG48 757 aa6.38□□□□□ -1.39
SCFD1-208ENST00000553278 OR52N2Q8NGI0 321 aa6.38□□□□□ -1.39
SCFD1-208ENST00000553278 NFKBIDQ8NI38 313 aa6.38□□□□□ -1.39
SCFD1-208ENST00000553278 ST8SIA2Q92186 375 aa6.38□□□□□ -1.39
SCFD1-208ENST00000553278 PIGSQ96S52 555 aa6.38□□□□□ -1.39
SCFD1-208ENST00000553278 PAAF1Q9BRP4 392 aa6.38□□□□□ -1.39
SCFD1-208ENST00000553278 AGO3Q9H9G7 860 aaKnown RBP6.38□□□□□ -1.39
SCFD1-208ENST00000553278 FAM53CQ9NYF3 392 aa6.38□□□□□ -1.39
SCFD1-208ENST00000553278 TAS2R10Q9NYW0 307 aa6.38□□□□□ -1.39
SCFD1-208ENST00000553278 CFDP1Q9UEE9 299 aaPredicted RBP6.38□□□□□ -1.39
SCFD1-208ENST00000553278 ZBTB1Q9Y2K1 713 aa6.38□□□□□ -1.39
SCFD1-208ENST00000553278 SLC27A6Q9Y2P4 619 aa6.38□□□□□ -1.39
SCFD1-208ENST00000553278 GDAQ9Y2T3 454 aa6.38□□□□□ -1.39
SCFD1-208ENST00000553278 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.38□□□□□ -1.39
SCFD1-208ENST00000553278 SH3D21A4FU49 640 aa6.37□□□□□ -1.39
SCFD1-208ENST00000553278 MATN2O00339 956 aa6.37□□□□□ -1.39
SCFD1-208ENST00000553278 TNPO2O14787 897 aaKnown RBP6.37□□□□□ -1.39
SCFD1-208ENST00000553278 HNRNPRO43390 633 aaKnown RBP6.37□□□□□ -1.39
SCFD1-208ENST00000553278 MFAP3LO75121 409 aa6.37□□□□□ -1.39
SCFD1-208ENST00000553278 TSPAN9O75954 239 aa6.37□□□□□ -1.39
SCFD1-208ENST00000553278 CYP21A2P08686 494 aa6.37□□□□□ -1.39
SCFD1-208ENST00000553278 PDE6CP51160 858 aa6.37□□□□□ -1.39
SCFD1-208ENST00000553278 TIAL1Q01085 375 aaKnown RBP eCLIP6.37□□□□□ -1.39
SCFD1-208ENST00000553278 CALD1Q05682 793 aaKnown RBP6.37□□□□□ -1.39
SCFD1-208ENST00000553278 DENND1BQ6P3S1 775 aa6.37□□□□□ -1.39
SCFD1-208ENST00000553278 PRR23BQ6ZRT6 265 aa6.37□□□□□ -1.39
SCFD1-208ENST00000553278 CBLL1Q75N03 491 aa6.37□□□□□ -1.39
SCFD1-208ENST00000553278 KRT27Q7Z3Y8 459 aa6.37□□□□□ -1.39
SCFD1-208ENST00000553278 PXKQ7Z7A4 578 aa6.37□□□□□ -1.39
SCFD1-208ENST00000553278 SYNE4Q8N205 404 aa6.37□□□□□ -1.39
SCFD1-208ENST00000553278 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.37□□□□□ -1.39
SCFD1-208ENST00000553278 ZCCHC10Q8TBK6 192 aa6.37□□□□□ -1.39
SCFD1-208ENST00000553278 KCNG4Q8TDN1 519 aa6.37□□□□□ -1.39
SCFD1-208ENST00000553278 SLC22A17Q8WUG5 538 aa6.37□□□□□ -1.39
SCFD1-208ENST00000553278 ATRIPQ8WXE1 791 aa6.37□□□□□ -1.39
SCFD1-208ENST00000553278 FAM168AQ92567 244 aa6.37□□□□□ -1.39
SCFD1-208ENST00000553278 ATP2A3Q93084 1043 aa6.37□□□□□ -1.39
SCFD1-208ENST00000553278 MBD6Q96DN6 1003 aa6.37□□□□□ -1.39
SCFD1-208ENST00000553278 LRIG1Q96JA1 1093 aa6.37□□□□□ -1.39
SCFD1-208ENST00000553278 ZMAT2Q96NC0 199 aaKnown RBP6.37□□□□□ -1.39
SCFD1-208ENST00000553278 PPP1R10Q96QC0 940 aaKnown RBP6.37□□□□□ -1.39
SCFD1-208ENST00000553278 SLF1Q9BQI6 1058 aa6.37□□□□□ -1.39
SCFD1-208ENST00000553278 ARHGAP39Q9C0H5 1083 aa6.37□□□□□ -1.39
SCFD1-208ENST00000553278 TAOK3Q9H2K8 898 aa6.37□□□□□ -1.39
SCFD1-208ENST00000553278 KCNK12Q9HB15 430 aa6.37□□□□□ -1.39
SCFD1-208ENST00000553278 PPP1R14DQ9NXH3 145 aa6.37□□□□□ -1.39
SCFD1-208ENST00000553278 SMG5Q9UPR3 1016 aaKnown RBP6.37□□□□□ -1.39
SCFD1-208ENST00000553278 NAALADL1Q9UQQ1 740 aa6.37□□□□□ -1.39
SCFD1-208ENST00000553278 MAGED1Q9Y5V3 778 aaPredicted RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms