RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 GPR174Q9BXC1 333 aa5.56□□□□□ -1.52
CKAP4-203ENST00000553039 POLR3FQ9H1D9 316 aaPredicted RBP5.56□□□□□ -1.52
CKAP4-203ENST00000553039 PCED1AQ9H1Q7 454 aa5.56□□□□□ -1.52
CKAP4-203ENST00000553039 CRISPLD1Q9H336 500 aa5.56□□□□□ -1.52
CKAP4-203ENST00000553039 RPF1Q9H9Y2 349 aaKnown RBP5.56□□□□□ -1.52
CKAP4-203ENST00000553039 NEUROD4Q9HD90 331 aa5.56□□□□□ -1.52
CKAP4-203ENST00000553039 ITM2CQ9NQX7 267 aa5.56□□□□□ -1.52
CKAP4-203ENST00000553039 KBTBD4Q9NVX7 518 aa5.56□□□□□ -1.52
CKAP4-203ENST00000553039 WSB2Q9NYS7 404 aaPredicted RBP5.56□□□□□ -1.52
CKAP4-203ENST00000553039 RGL1Q9NZL6 768 aa5.56□□□□□ -1.52
CKAP4-203ENST00000553039 TBC1D14Q9P2M4 693 aa5.56□□□□□ -1.52
CKAP4-203ENST00000553039 DEC1Q9P2X7 70 aa5.56□□□□□ -1.52
CKAP4-203ENST00000553039 DDX25Q9UHL0 483 aaKnown RBP5.56□□□□□ -1.52
CKAP4-203ENST00000553039 DSEQ9UL01 958 aa5.56□□□□□ -1.52
CKAP4-203ENST00000553039 MAGED2Q9UNF1 606 aaPredicted RBP5.56□□□□□ -1.52
CKAP4-203ENST00000553039 BTBD3Q9Y2F9 522 aa5.56□□□□□ -1.52
CKAP4-203ENST00000553039 ANKRD6Q9Y2G4 727 aa5.56□□□□□ -1.52
CKAP4-203ENST00000553039 TIMM13Q9Y5L4 95 aaPredicted RBP5.56□□□□□ -1.52
CKAP4-203ENST00000553039 WDFY3Q8IZQ1 3526 aa5.56□□□□□ -1.52
CKAP4-203ENST00000553039 CNTNAP5Q8WYK1 1306 aa5.55□□□□□ -1.52
CKAP4-203ENST00000553039 STK36Q9NRP7 1315 aa5.55□□□□□ -1.52
CKAP4-203ENST00000553039 COL4A2P08572 1712 aa5.55□□□□□ -1.52
CKAP4-203ENST00000553039 VWA8A3KMH1 1905 aa5.55□□□□□ -1.52
CKAP4-203ENST00000553039 A6NHS1 94 aa5.55□□□□□ -1.52
CKAP4-203ENST00000553039 GFRA2O00451 464 aa5.55□□□□□ -1.52
CKAP4-203ENST00000553039 PAPSS1O43252 624 aaPredicted RBP5.55□□□□□ -1.52
CKAP4-203ENST00000553039 XPOTO43592 962 aaKnown RBP5.55□□□□□ -1.52
CKAP4-203ENST00000553039 SOAT2O75908 522 aa5.55□□□□□ -1.52
CKAP4-203ENST00000553039 GJB6O95452 261 aa5.55□□□□□ -1.52
CKAP4-203ENST00000553039 LARGE1O95461 756 aa5.55□□□□□ -1.52
CKAP4-203ENST00000553039 ITGB2P05107 769 aa5.55□□□□□ -1.52
CKAP4-203ENST00000553039 ITGAVP06756 1048 aa5.55□□□□□ -1.52
CKAP4-203ENST00000553039 HAPLN1P10915 354 aaPredicted RBP5.55□□□□□ -1.52
CKAP4-203ENST00000553039 CYP3A5P20815 502 aa5.55□□□□□ -1.52
CKAP4-203ENST00000553039 RBMS1P29558 406 aaKnown RBP5.55□□□□□ -1.52
CKAP4-203ENST00000553039 LSSP48449 732 aa5.55□□□□□ -1.52
CKAP4-203ENST00000553039 ZNF132P52740 706 aa5.55□□□□□ -1.52
CKAP4-203ENST00000553039 RCAN1P53805 252 aa5.55□□□□□ -1.52
CKAP4-203ENST00000553039 OSTNP61366 133 aa5.55□□□□□ -1.52
CKAP4-203ENST00000553039 ASIC1P78348 528 aa5.55□□□□□ -1.52
CKAP4-203ENST00000553039 GAD2Q05329 585 aa5.55□□□□□ -1.52
CKAP4-203ENST00000553039 CTTNQ14247 550 aaKnown RBP5.55□□□□□ -1.52
CKAP4-203ENST00000553039 KCNB1Q14721 858 aa5.55□□□□□ -1.52
CKAP4-203ENST00000553039 DHCR24Q15392 516 aa5.55□□□□□ -1.52
CKAP4-203ENST00000553039 KRTAP21-3Q3LHN1 58 aa5.55□□□□□ -1.52
CKAP4-203ENST00000553039 SLC39A12Q504Y0 691 aa5.55□□□□□ -1.52
CKAP4-203ENST00000553039 CDCA2Q69YH5 1023 aaPredicted RBP5.55□□□□□ -1.52
CKAP4-203ENST00000553039 FBXL19Q6PCT2 694 aa5.55□□□□□ -1.52
CKAP4-203ENST00000553039 MAEAQ7L5Y9 396 aa5.55□□□□□ -1.52
CKAP4-203ENST00000553039 TMEM150AQ86TG1 271 aa5.55□□□□□ -1.52
CKAP4-203ENST00000553039 SLFN12Q8IYM2 578 aa5.55□□□□□ -1.52
CKAP4-203ENST00000553039 CHPFQ8IZ52 775 aa5.55□□□□□ -1.52
CKAP4-203ENST00000553039 EXD3Q8N9H8 876 aa5.55□□□□□ -1.52
CKAP4-203ENST00000553039 LRRC15Q8TF66 581 aa5.55□□□□□ -1.52
CKAP4-203ENST00000553039 DYDC2Q96IM9 177 aa5.55□□□□□ -1.52
CKAP4-203ENST00000553039 IFT74Q96LB3 600 aa5.55□□□□□ -1.52
CKAP4-203ENST00000553039 TSPAN18Q96SJ8 248 aa5.55□□□□□ -1.52
CKAP4-203ENST00000553039 SUV39H2Q9H5I1 410 aa5.55□□□□□ -1.52
CKAP4-203ENST00000553039 PLEKHA5Q9HAU0 1116 aa5.55□□□□□ -1.52
CKAP4-203ENST00000553039 TRPC7Q9HCX4 862 aa5.55□□□□□ -1.52
CKAP4-203ENST00000553039 OSGEPQ9NPF4 335 aa5.55□□□□□ -1.52
CKAP4-203ENST00000553039 PCDH12Q9NPG4 1184 aa5.55□□□□□ -1.52
CKAP4-203ENST00000553039 SH3GLB2Q9NR46 395 aa5.55□□□□□ -1.52
CKAP4-203ENST00000553039 THSD1Q9NS62 852 aa5.55□□□□□ -1.52
CKAP4-203ENST00000553039 ADAMTS1Q9UHI8 967 aa5.55□□□□□ -1.52
CKAP4-203ENST00000553039 EIF2B4Q9UI10 523 aaKnown RBP5.55□□□□□ -1.52
CKAP4-203ENST00000553039 FOXD3Q9UJU5 478 aaPredicted RBP5.55□□□□□ -1.52
CKAP4-203ENST00000553039 ARHGAP26Q9UNA1 814 aa5.55□□□□□ -1.52
CKAP4-203ENST00000553039 TNFSF13BQ9Y275 285 aa5.55□□□□□ -1.52
CKAP4-203ENST00000553039 STARD13Q9Y3M8 1113 aa5.55□□□□□ -1.52
CKAP4-203ENST00000553039 TDRD15B5MCY1 1934 aaKnown RBP5.54□□□□□ -1.52
CKAP4-203ENST00000553039 PHLPP2Q6ZVD8 1323 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 GOLGA8AA7E2F4 631 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 GOLGA8BA8MQT2 603 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 YKT6O15498 198 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 EDIL3O43854 480 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 MT-CO3P00414 261 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 ACADMP11310 421 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 ODC1P11926 461 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 HMGA1P17096 107 aaKnown RBP5.54□□□□□ -1.52
CKAP4-203ENST00000553039 CKMT2P17540 419 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 ABCB4P21439 1286 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 NMT1P30419 496 aaKnown RBP5.54□□□□□ -1.52
CKAP4-203ENST00000553039 GSTT1P30711 240 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 TNFSF9P41273 254 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 NAMPTP43490 491 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 GRIA4P48058 902 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 NASPP49321 788 aaPredicted RBP5.54□□□□□ -1.52
CKAP4-203ENST00000553039 C21orf59P57076 290 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 BNC1Q01954 994 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 TLE1Q04724 770 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 STARD3Q14849 445 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 NCAPHQ15003 741 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 NFE2Q16621 373 aaPredicted RBP5.54□□□□□ -1.52
CKAP4-203ENST00000553039 ARL13BQ3SXY8 428 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 KIAA1614Q5VZ46 1190 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 EEF1DP3Q658K8 133 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 GALNT17Q6IS24 598 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 RHBDF2Q6PJF5 856 aa5.54□□□□□ -1.52
CKAP4-203ENST00000553039 APOA5Q6Q788 366 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms