RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 STAT1P42224 750 aa12.29□□□□□ -0.44
TRAFD1-209ENST00000552896 MLLT6P55198 1093 aaPredicted RBP12.29□□□□□ -0.44
TRAFD1-209ENST00000552896 ZXDBP98169 803 aa12.29□□□□□ -0.44
TRAFD1-209ENST00000552896 GOLGA8FQ08AF8 430 aa12.29□□□□□ -0.44
TRAFD1-209ENST00000552896 GOLGA8DPQ0D2H9 430 aa12.29□□□□□ -0.44
TRAFD1-209ENST00000552896 NR1I3Q14994 352 aa12.29□□□□□ -0.44
TRAFD1-209ENST00000552896 PDGFRLQ15198 375 aa12.29□□□□□ -0.44
TRAFD1-209ENST00000552896 C10orf120Q5SQS8 335 aa12.29□□□□□ -0.44
TRAFD1-209ENST00000552896 HFE2Q6ZVN8 426 aa12.29□□□□□ -0.44
TRAFD1-209ENST00000552896 CACNA2D4Q7Z3S7 1137 aa12.29□□□□□ -0.44
TRAFD1-209ENST00000552896 NOP9Q86U38 636 aaKnown RBP12.29□□□□□ -0.44
TRAFD1-209ENST00000552896 ZNF677Q86XU0 584 aa12.29□□□□□ -0.44
TRAFD1-209ENST00000552896 PASD1Q8IV76 773 aa12.29□□□□□ -0.44
TRAFD1-209ENST00000552896 CSGALNACT1Q8TDX6 532 aa12.29□□□□□ -0.44
TRAFD1-209ENST00000552896 OSCP1Q8WVF1 389 aa12.29□□□□□ -0.44
TRAFD1-209ENST00000552896 DDX1Q92499 740 aaKnown RBP12.29□□□□□ -0.44
TRAFD1-209ENST00000552896 ATP2A3Q93084 1043 aa12.29□□□□□ -0.44
TRAFD1-209ENST00000552896 SHDQ96IW2 340 aa12.29□□□□□ -0.44
TRAFD1-209ENST00000552896 NAP1L5Q96NT1 182 aaPredicted RBP12.29□□□□□ -0.44
TRAFD1-209ENST00000552896 FAM83CQ9BQN1 747 aa12.29□□□□□ -0.44
TRAFD1-209ENST00000552896 DDX23Q9BUQ8 820 aaKnown RBP12.29□□□□□ -0.44
TRAFD1-209ENST00000552896 TRIM62Q9BVG3 475 aa12.29□□□□□ -0.44
TRAFD1-209ENST00000552896 MFSD1Q9H3U5 465 aa12.29□□□□□ -0.44
TRAFD1-209ENST00000552896 ST7Q9NRC1 585 aa12.29□□□□□ -0.44
TRAFD1-209ENST00000552896 OLA1Q9NTK5 396 aaKnown RBP12.29□□□□□ -0.44
TRAFD1-209ENST00000552896 SMPD4Q9NXE4 827 aa12.29□□□□□ -0.44
TRAFD1-209ENST00000552896 CYTH4Q9UIA0 394 aa12.29□□□□□ -0.44
TRAFD1-209ENST00000552896 DNMT3LQ9UJW3 386 aa12.29□□□□□ -0.44
TRAFD1-209ENST00000552896 NOCTQ9UK39 431 aaKnown RBP12.29□□□□□ -0.44
TRAFD1-209ENST00000552896 E2F8A0AVK6 867 aa12.28□□□□□ -0.44
TRAFD1-209ENST00000552896 YJEFN3A6XGL0 299 aa12.28□□□□□ -0.44
TRAFD1-209ENST00000552896 E5RJQ4 531 aa12.28□□□□□ -0.44
TRAFD1-209ENST00000552896 E7ENQ6 273 aa12.28□□□□□ -0.44
TRAFD1-209ENST00000552896 SLC9A3R1O14745 358 aaPredicted RBP12.28□□□□□ -0.44
TRAFD1-209ENST00000552896 LTFP02788 710 aa12.28□□□□□ -0.44
TRAFD1-209ENST00000552896 PBX1P40424 430 aa12.28□□□□□ -0.44
TRAFD1-209ENST00000552896 IFNAR2P48551 515 aa12.28□□□□□ -0.44
TRAFD1-209ENST00000552896 UBASH3AP57075 661 aa12.28□□□□□ -0.44
TRAFD1-209ENST00000552896 STARD6P59095 220 aa12.28□□□□□ -0.44
TRAFD1-209ENST00000552896 ITPRIPL2Q3MIP1 535 aa12.28□□□□□ -0.44
TRAFD1-209ENST00000552896 SLC44A4Q53GD3 710 aa12.28□□□□□ -0.44
TRAFD1-209ENST00000552896 CWF19L1Q69YN2 538 aaKnown RBP12.28□□□□□ -0.44
TRAFD1-209ENST00000552896 MSANTD2Q6P1R3 559 aa12.28□□□□□ -0.44
TRAFD1-209ENST00000552896 C1orf228Q6PIY5 440 aa12.28□□□□□ -0.44
TRAFD1-209ENST00000552896 TPRG1Q6ZUI0 275 aa12.28□□□□□ -0.44
TRAFD1-209ENST00000552896 RSRC2Q7L4I2 434 aaKnown RBP12.28□□□□□ -0.44
TRAFD1-209ENST00000552896 TMEM110Q86TL2 294 aa12.28□□□□□ -0.44
TRAFD1-209ENST00000552896 CPA6Q8N4T0 437 aa12.28□□□□□ -0.44
TRAFD1-209ENST00000552896 FBXL6Q8N531 539 aa12.28□□□□□ -0.44
TRAFD1-209ENST00000552896 C1orf131Q8NDD1 294 aaKnown RBP12.28□□□□□ -0.44
TRAFD1-209ENST00000552896 GOLGA1Q92805 767 aa12.28□□□□□ -0.44
TRAFD1-209ENST00000552896 PBXIP1Q96AQ6 731 aa12.28□□□□□ -0.44
TRAFD1-209ENST00000552896 ZFYVE19Q96K21 471 aa12.28□□□□□ -0.44
TRAFD1-209ENST00000552896 CPXM1Q96SM3 734 aa12.28□□□□□ -0.44
TRAFD1-209ENST00000552896 LRFN3Q9BTN0 628 aa12.28□□□□□ -0.44
TRAFD1-209ENST00000552896 TTYH3Q9C0H2 523 aa12.28□□□□□ -0.44
TRAFD1-209ENST00000552896 TBC1D17Q9HA65 648 aa12.28□□□□□ -0.44
TRAFD1-209ENST00000552896 HPS4Q9NQG7 708 aa12.28□□□□□ -0.44
TRAFD1-209ENST00000552896 HEBP1Q9NRV9 189 aa12.28□□□□□ -0.44
TRAFD1-209ENST00000552896 DUS2Q9NX74 493 aaKnown RBP12.28□□□□□ -0.44
TRAFD1-209ENST00000552896 CFAP97Q9P2B7 532 aa12.28□□□□□ -0.44
TRAFD1-209ENST00000552896 PIAS3Q9Y6X2 628 aa12.28□□□□□ -0.44
TRAFD1-209ENST00000552896 PIK3R2O00459 728 aa12.27□□□□□ -0.45
TRAFD1-209ENST00000552896 NFATC1O95644 943 aa12.27□□□□□ -0.45
TRAFD1-209ENST00000552896 TBX18O95935 607 aa12.27□□□□□ -0.45
TRAFD1-209ENST00000552896 PDGFBP01127 241 aaPredicted RBP12.27□□□□□ -0.45
TRAFD1-209ENST00000552896 TPM3P06753 285 aa12.27□□□□□ -0.45
TRAFD1-209ENST00000552896 SNX16P57768 344 aa12.27□□□□□ -0.45
TRAFD1-209ENST00000552896 CDR2Q01850 454 aa12.27□□□□□ -0.45
TRAFD1-209ENST00000552896 TNK2Q07912 1038 aa12.27□□□□□ -0.45
TRAFD1-209ENST00000552896 EML3Q32P44 896 aa12.27□□□□□ -0.45
TRAFD1-209ENST00000552896 PTPN20Q4JDL3 420 aa12.27□□□□□ -0.45
TRAFD1-209ENST00000552896 FIGNQ5HY92 759 aa12.27□□□□□ -0.45
TRAFD1-209ENST00000552896 IER5LQ5T953 404 aa12.27□□□□□ -0.45
TRAFD1-209ENST00000552896 TAF3Q5VWG9 929 aa12.27□□□□□ -0.45
TRAFD1-209ENST00000552896 BSPRYQ5W0U4 402 aa12.27□□□□□ -0.45
TRAFD1-209ENST00000552896 BTBD8Q5XKL5 378 aa12.27□□□□□ -0.45
TRAFD1-209ENST00000552896 BEND5Q7L4P6 421 aa12.27□□□□□ -0.45
TRAFD1-209ENST00000552896 SUGP1Q8IWZ8 645 aaKnown RBP12.27□□□□□ -0.45
TRAFD1-209ENST00000552896 WDTC1Q8N5D0 677 aa12.27□□□□□ -0.45
TRAFD1-209ENST00000552896 TMEM35BQ8NCS4 154 aa12.27□□□□□ -0.45
TRAFD1-209ENST00000552896 TTC16Q8NEE8 873 aa12.27□□□□□ -0.45
TRAFD1-209ENST00000552896 IPO4Q8TEX9 1081 aaKnown RBP12.27□□□□□ -0.45
TRAFD1-209ENST00000552896 CLEC4CQ8WTT0 213 aa12.27□□□□□ -0.45
TRAFD1-209ENST00000552896 BAP1Q92560 729 aa12.27□□□□□ -0.45
TRAFD1-209ENST00000552896 OTUB2Q96DC9 234 aa12.27□□□□□ -0.45
TRAFD1-209ENST00000552896 IQCDQ96DY2 449 aa12.27□□□□□ -0.45
TRAFD1-209ENST00000552896 PPP1R13BQ96KQ4 1090 aa12.27□□□□□ -0.45
TRAFD1-209ENST00000552896 KLF16Q9BXK1 252 aaPredicted RBP12.27□□□□□ -0.45
TRAFD1-209ENST00000552896 EDEM3Q9BZQ6 932 aa12.27□□□□□ -0.45
TRAFD1-209ENST00000552896 PDCL3Q9H2J4 239 aa12.27□□□□□ -0.45
TRAFD1-209ENST00000552896 C8orf33Q9H7E9 229 aaPredicted RBP12.27□□□□□ -0.45
TRAFD1-209ENST00000552896 GKN1Q9NS71 199 aa12.27□□□□□ -0.45
TRAFD1-209ENST00000552896 ABCC13Q9NSE7 274 aa12.27□□□□□ -0.45
TRAFD1-209ENST00000552896 MARCH2Q9P0N8 246 aa12.27□□□□□ -0.45
TRAFD1-209ENST00000552896 TBC1D14Q9P2M4 693 aa12.27□□□□□ -0.45
TRAFD1-209ENST00000552896 RASAL2Q9UJF2 1139 aa12.27□□□□□ -0.45
TRAFD1-209ENST00000552896 STRIP2Q9ULQ0 834 aa12.27□□□□□ -0.45
TRAFD1-209ENST00000552896 SH3BP1Q9Y3L3 701 aa12.27□□□□□ -0.45
TRAFD1-209ENST00000552896 WNT6Q9Y6F9 365 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms