RNA–Protein interactions for RNA: ENST00000552561.5

TMEM106C-220, Transcript of transmembrane protein 106C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM106C, Length 810 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-220ENST00000552561 RTN3O95197 1032 aaPredicted RBP4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 TNNC2P02585 160 aa4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 C4BPAP04003 597 aaKnown RBP4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 CAPNS1P04632 268 aa4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 RPN1P04843 607 aaKnown RBP4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 CYP17A1P05093 508 aa4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 CKMP06732 381 aa4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 PTPN1P18031 435 aaKnown RBP4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 ACAT1P24752 427 aaKnown RBP4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 HOXC13P31276 330 aa4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 STAT6P42226 847 aa4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 GRIA2P42262 883 aa4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 IFNAR2P48551 515 aa4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 DNM1Q05193 864 aaKnown RBP4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 CYP24A1Q07973 514 aa4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 INCA1Q0VD86 236 aa4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 DHX8Q14562 1220 aaKnown RBP4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 KCNB1Q14721 858 aa4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 DHCR24Q15392 516 aa4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 ELF2Q15723 593 aa4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 TAF12Q16514 161 aa4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 CCDC142Q17RM4 750 aa4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 KNOP1Q1ED39 458 aaKnown RBP4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 MAP7D1Q3KQU3 841 aa4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 ZACNQ401N2 412 aa4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 PREPLQ4J6C6 727 aaPredicted RBP4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 USP39Q53GS9 565 aaKnown RBP4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 FAM26FQ5R3K3 315 aa4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 LCE2AQ5TA79 106 aaPredicted RBP4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 SH3PXD2AQ5TCZ1 1133 aa4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 NAIF1Q69YI7 327 aaPredicted RBP4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 SMYD5Q6GMV2 418 aa4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 KIAA1211LQ6NV74 962 aa4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 FAM173BQ6P4H8 233 aa4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 SLC23A3Q6PIS1 610 aa4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 RHBDF2Q6PJF5 856 aa4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 SHC4Q6S5L8 630 aa4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 HTR3DQ70Z44 454 aa4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 PIP4P1Q86T03 277 aa4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 ARL14EPQ8N8R7 260 aaPredicted RBP4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 IL17RCQ8NAC3 791 aa4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 ZMIZ2Q8NF64 920 aa4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 MDGA1Q8NFP4 955 aa4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 RASSF8Q8NHQ8 419 aa4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 RPLP0P6Q8NHW5 317 aa4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 MYLPFQ96A32 169 aa4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 SYAP1Q96A49 352 aaPredicted RBP4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 SLITRK1Q96PX8 696 aa4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 ARRDC1-AS1Q9H2J1 176 aa4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 LINC00597Q9H2U6 94 aa4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 ZHX3Q9H4I2 956 aa4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 WDR70Q9NW82 654 aa4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 HCN2Q9UL51 889 aa4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 TRAF3IP3Q9Y228 551 aa4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 SLC27A6Q9Y2P4 619 aa4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 WNT6Q9Y6F9 365 aa4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 LRRK2Q5S007 2527 aa4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 KNL1Q8NG31 2342 aa4.71□□□□□ -1.66
TMEM106C-220ENST00000552561 CABIN1Q9Y6J0 2220 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 URB1O60287 2271 aaKnown RBP4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 DOPEY2Q9Y3R5 2298 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 MYOFQ9NZM1 2061 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 C10orf142B7Z368 130 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 GOLGA6L22H0YM25 854 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 PDXKO00764 312 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 NPC1O15118 1278 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 HCRTO43612 131 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 KLRC4O43908 158 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 CACNG3O60359 315 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 ADAM23O75077 832 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 ATP2C2O75185 946 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 GADD45BO75293 160 aaPredicted RBP4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 GJB3O75712 270 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 KAT7O95251 611 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 CAVIN2O95810 425 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 ADH1CP00326 375 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 ASS1P00966 412 aaKnown RBP4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 IGLV3-19P01714 112 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 CCDC192P0DO97 292 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 IDEP14735 1019 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 HNRNPLP14866 589 aaKnown RBP eCLIP4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 BDNFP23560 247 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 YWHAQP27348 245 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 GNL1P36915 607 aaPredicted RBP4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 CACNA2D1P54289 1103 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 RIPPLY3P57055 190 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 GAD2Q05329 585 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 PDE4CQ08493 712 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 LMAN2Q12907 356 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 TAF10Q12962 218 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 SEMA3BQ13214 749 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 SLC14A1Q13336 389 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 BYSLQ13895 437 aaKnown RBP4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 HNRNPDQ14103 355 aaKnown RBP4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 SF3A2Q15428 464 aaKnown RBP4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 WDR72Q3MJ13 1102 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 EOGTQ5NDL2 527 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 SDHAF4Q5VUM1 108 aa4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 TDRD10Q5VZ19 366 aaKnown RBP4.7□□□□□ -1.66
TMEM106C-220ENST00000552561 RESP18Q5W5W9 173 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms