RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 PDCD2Q16342 344 aaPredicted RBP11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 BMT2Q1RMZ1 405 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 GRAMD1BQ3KR37 738 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 CTXN3Q4LDR2 81 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 ERMARDQ5T6L9 678 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 POU5F2Q8N7G0 328 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 ABCG8Q9H221 673 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 NT5MQ9NPB1 228 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 TRMT13Q9NUP7 481 aaKnown RBP11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 ANGPTL3Q9Y5C1 460 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 RRN3P2A6NIE6 340 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 SPDYE5A6NIY4 337 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 SH3BGRLO75368 114 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 AGTP01019 485 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 RARGP13631 454 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 FCGRTP55899 365 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 GBE1Q04446 702 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 STAT4Q14765 748 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 KLHL38Q2WGJ6 581 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 KBTBD12Q3ZCT8 623 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 OVOS1Q6IE37 1185 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 DHX33Q9H6R0 707 aaKnown RBP11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 NDFIP2Q9NV92 336 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 PLK2Q9NYY3 685 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 SHOC2Q9UQ13 582 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 ADGRA2Q96PE1 1338 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 TTC24A2A3L6 582 aaPredicted RBP11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 IGF2BP3O00425 579 aaKnown RBP eCLIP11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 HAUS5O94927 633 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 UBOX5O94941 541 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 APOEP02649 317 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 MAGEA9P43362 315 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 OAZ1P54368 228 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 RBBP5Q15291 538 aaKnown RBP11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 ZPBP2Q6X784 338 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 PRCCQ92733 491 aaPredicted RBP11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 PTPRN2Q92932 1015 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 PIWIL1Q96J94 861 aaKnown RBP11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 TBCBQ99426 244 aa11.17□□□□□ -0.62
TGFBR1-209ENST00000552516 SLC12A8A0AV02 714 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 CBX6O95503 412 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 TGM2P21980 687 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 KDELR1P24390 212 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 RPA3P35244 121 aaPredicted RBP11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 GDF10P55107 478 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 DDIASQ8IXT1 998 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 EXD1Q8NHP7 514 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 GANCQ8TET4 914 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 CYP2S1Q96SQ9 504 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 TKTL2Q9H0I9 626 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 TSPYL2Q9H2G4 693 aaPredicted RBP11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 PIF1Q9H611 641 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 MAP3K20Q9NYL2 800 aaKnown RBP11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 WDR35Q9P2L0 1181 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 AIM2O14862 343 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 VCPP55072 806 aaKnown RBP11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 ZNF280AP59817 542 aaPredicted RBP11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 ANKRD22Q5VYY1 191 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 LRRC6Q86X45 466 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 ZNF677Q86XU0 584 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 TCP10LQ8TDR4 215 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 DDX20Q9UHI6 824 aaKnown RBP11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 TBKBP1A7MCY6 615 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 RPL17P18621 184 aaKnown RBP11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 MAP2K2P36507 400 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 PGGT1BP53609 377 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 SLC10A6Q3KNW5 377 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 MFSD14AQ96MC6 490 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 SLITRK1Q96PX8 696 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 PRKAG2Q9UGJ0 569 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 MYH11P35749 1972 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 ZC3H4Q9UPT8 1303 aaKnown RBP11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 GLTPD2A6NH11 291 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 AGPSO00116 658 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 RPL22P35268 128 aaKnown RBP11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 FNTAP49354 379 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 USP50Q70EL3 339 aaPredicted RBP11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 TRMT10CQ7L0Y3 403 aaKnown RBP11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 CFAP52Q8N1V2 620 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 LRRC57Q8N9N7 239 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 ATAD1Q8NBU5 361 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 THTPAQ9BU02 230 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 ZNF518BQ9C0D4 1074 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 PHTF1Q9UMS5 762 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 NUP188Q5SRE5 1749 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 SYNDIG1LA6NDD5 238 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 C3orf70A6NLC5 250 aaPredicted RBP11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 MEIS3P2A8K0S8 358 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 PHGDHO43175 533 aaKnown RBP11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 PAPSS1O43252 624 aaPredicted RBP11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 PSTPIP1O43586 416 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 JAM2P57087 298 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 TAF11Q15544 211 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 TRPM8Q7Z2W7 1104 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 NPLOC4Q8TAT6 608 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 MORC4Q8TE76 937 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 KATNAL1Q9BW62 490 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 HPS4Q9NQG7 708 aa11.16□□□□□ -0.62
TGFBR1-209ENST00000552516 L3MBTL1Q9Y468 752 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms