RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 MRGPRX1Q96LB2 322 aa17.9■□□□□ 0.46
CACNB3-222ENST00000552465 XPO6Q96QU8 1125 aaKnown RBP17.9■□□□□ 0.46
CACNB3-222ENST00000552465 CGRRF1Q99675 332 aa17.9■□□□□ 0.46
CACNB3-222ENST00000552465 NACA2Q9H009 215 aa17.9■□□□□ 0.46
CACNB3-222ENST00000552465 SLC6A17Q9H1V8 727 aa17.9■□□□□ 0.46
CACNB3-222ENST00000552465 CD93Q9NPY3 652 aa17.9■□□□□ 0.46
CACNB3-222ENST00000552465 COMMD8Q9NX08 183 aa17.9■□□□□ 0.46
CACNB3-222ENST00000552465 NXF1Q9UBU9 619 aaKnown RBP17.9■□□□□ 0.46
CACNB3-222ENST00000552465 APOBEC2Q9Y235 224 aaKnown RBP17.9■□□□□ 0.46
CACNB3-222ENST00000552465 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.9■□□□□ 0.46
CACNB3-222ENST00000552465 RAD54BQ9Y620 910 aa17.9■□□□□ 0.46
CACNB3-222ENST00000552465 A0A087X0B3 334 aa17.89■□□□□ 0.45
CACNB3-222ENST00000552465 FAM92AA1XBS5 289 aa17.89■□□□□ 0.45
CACNB3-222ENST00000552465 NEDD8-MDP1E9PL57 170 aa17.89■□□□□ 0.45
CACNB3-222ENST00000552465 CBFA2T3O75081 653 aa17.89■□□□□ 0.45
CACNB3-222ENST00000552465 MYL6P60660 151 aa17.89■□□□□ 0.45
CACNB3-222ENST00000552465 TRPC3Q13507 836 aa17.89■□□□□ 0.45
CACNB3-222ENST00000552465 PSMD6Q15008 389 aa17.89■□□□□ 0.45
CACNB3-222ENST00000552465 GLRX5Q86SX6 157 aa17.89■□□□□ 0.45
CACNB3-222ENST00000552465 SLCO6A1Q86UG4 719 aa17.89■□□□□ 0.45
CACNB3-222ENST00000552465 FAM35AQ86V20 835 aa17.89■□□□□ 0.45
CACNB3-222ENST00000552465 SCFD1Q8WVM8 642 aa17.89■□□□□ 0.45
CACNB3-222ENST00000552465 ZNF516Q92618 1163 aa17.89■□□□□ 0.45
CACNB3-222ENST00000552465 CCDC127Q96BQ5 260 aa17.89■□□□□ 0.45
CACNB3-222ENST00000552465 MED10Q9BTT4 135 aa17.89■□□□□ 0.45
CACNB3-222ENST00000552465 BBS2Q9BXC9 721 aa17.89■□□□□ 0.45
CACNB3-222ENST00000552465 ZDHHC5Q9C0B5 715 aa17.89■□□□□ 0.45
CACNB3-222ENST00000552465 XYLT2Q9H1B5 865 aa17.89■□□□□ 0.45
CACNB3-222ENST00000552465 DMAP1Q9NPF5 467 aaPredicted RBP17.89■□□□□ 0.45
CACNB3-222ENST00000552465 MARK1Q9P0L2 795 aa17.89■□□□□ 0.45
CACNB3-222ENST00000552465 WDR35Q9P2L0 1181 aa17.89■□□□□ 0.45
CACNB3-222ENST00000552465 ATP8B3O60423 1300 aa17.89■□□□□ 0.45
CACNB3-222ENST00000552465 ADAMTS20P59510 1910 aa17.88■□□□□ 0.45
CACNB3-222ENST00000552465 MYO18AQ92614 2054 aaKnown RBP17.88■□□□□ 0.45
CACNB3-222ENST00000552465 GFRA2O00451 464 aa17.88■□□□□ 0.45
CACNB3-222ENST00000552465 CISD3P0C7P0 127 aa17.88■□□□□ 0.45
CACNB3-222ENST00000552465 TYRP14679 529 aa17.88■□□□□ 0.45
CACNB3-222ENST00000552465 ATICP31939 592 aa17.88■□□□□ 0.45
CACNB3-222ENST00000552465 PGFP49763 221 aa17.88■□□□□ 0.45
CACNB3-222ENST00000552465 CYP24A1Q07973 514 aa17.88■□□□□ 0.45
CACNB3-222ENST00000552465 GRIK2Q13002 908 aa17.88■□□□□ 0.45
CACNB3-222ENST00000552465 C8orf34Q49A92 452 aa17.88■□□□□ 0.45
CACNB3-222ENST00000552465 TPGS1Q6ZTW0 290 aa17.88■□□□□ 0.45
CACNB3-222ENST00000552465 TOGARAM2Q6ZUX3 1019 aa17.88■□□□□ 0.45
CACNB3-222ENST00000552465 KLF16Q9BXK1 252 aaPredicted RBP17.88■□□□□ 0.45
CACNB3-222ENST00000552465 CACNA2D2Q9NY47 1150 aa17.88■□□□□ 0.45
CACNB3-222ENST00000552465 DMXL2Q8TDJ6 3036 aa17.88■□□□□ 0.45
CACNB3-222ENST00000552465 A0A1B0GTW7 788 aa17.87■□□□□ 0.45
CACNB3-222ENST00000552465 WASH3PC4AMC7 463 aa17.87■□□□□ 0.45
CACNB3-222ENST00000552465 TGFB1I1O43294 461 aa17.87■□□□□ 0.45
CACNB3-222ENST00000552465 TLR5O60602 858 aa17.87■□□□□ 0.45
CACNB3-222ENST00000552465 TBX18O95935 607 aa17.87■□□□□ 0.45
CACNB3-222ENST00000552465 CD6P30203 668 aa17.87■□□□□ 0.45
CACNB3-222ENST00000552465 CDH8P55286 799 aa17.87■□□□□ 0.45
CACNB3-222ENST00000552465 KIAA1324Q6UXG2 1013 aaKnown RBP17.87■□□□□ 0.45
CACNB3-222ENST00000552465 METTL3Q86U44 580 aaKnown RBP17.87■□□□□ 0.45
CACNB3-222ENST00000552465 MDM1Q8TC05 714 aa17.87■□□□□ 0.45
CACNB3-222ENST00000552465 ZNF507Q8TCN5 953 aa17.87■□□□□ 0.45
CACNB3-222ENST00000552465 HNRNPLLQ8WVV9 542 aaKnown RBP17.87■□□□□ 0.45
CACNB3-222ENST00000552465 DNASE2BQ8WZ79 361 aa17.87■□□□□ 0.45
CACNB3-222ENST00000552465 SMARCD1Q96GM5 515 aa17.87■□□□□ 0.45
CACNB3-222ENST00000552465 TRIM9Q9C026 710 aa17.87■□□□□ 0.45
CACNB3-222ENST00000552465 GZF1Q9H116 711 aaPredicted RBP17.87■□□□□ 0.45
CACNB3-222ENST00000552465 SMYD3Q9H7B4 428 aa17.87■□□□□ 0.45
CACNB3-222ENST00000552465 AGPAT3Q9NRZ7 376 aa17.87■□□□□ 0.45
CACNB3-222ENST00000552465 KIAA1522Q9P206 1035 aaPredicted RBP17.87■□□□□ 0.45
CACNB3-222ENST00000552465 PCOLCE2Q9UKZ9 415 aa17.87■□□□□ 0.45
CACNB3-222ENST00000552465 CEP192Q8TEP8 1941 aa17.86■□□□□ 0.45
CACNB3-222ENST00000552465 VPS37CA5D8V6 355 aaPredicted RBP17.86■□□□□ 0.45
CACNB3-222ENST00000552465 EIF3DO15371 548 aaKnown RBP eCLIP17.86■□□□□ 0.45
CACNB3-222ENST00000552465 AP1G2O75843 785 aa17.86■□□□□ 0.45
CACNB3-222ENST00000552465 DGKGP49619 791 aa17.86■□□□□ 0.45
CACNB3-222ENST00000552465 CEBPZQ03701 1054 aaKnown RBP17.86■□□□□ 0.45
CACNB3-222ENST00000552465 EPM2AIP1Q7L775 607 aaPredicted RBP17.86■□□□□ 0.45
CACNB3-222ENST00000552465 FUKQ8N0W3 1084 aa17.86■□□□□ 0.45
CACNB3-222ENST00000552465 SPRYD3Q8NCJ5 442 aa17.86■□□□□ 0.45
CACNB3-222ENST00000552465 ZMIZ2Q8NF64 920 aa17.86■□□□□ 0.45
CACNB3-222ENST00000552465 SYAP1Q96A49 352 aaPredicted RBP17.86■□□□□ 0.45
CACNB3-222ENST00000552465 TOE1Q96GM8 510 aaKnown RBP17.86■□□□□ 0.45
CACNB3-222ENST00000552465 TNIP3Q96KP6 325 aa17.86■□□□□ 0.45
CACNB3-222ENST00000552465 ITM2CQ9NQX7 267 aa17.86■□□□□ 0.45
CACNB3-222ENST00000552465 WSB2Q9NYS7 404 aaPredicted RBP17.86■□□□□ 0.45
CACNB3-222ENST00000552465 RAXQ9Y2V3 346 aa17.86■□□□□ 0.45
CACNB3-222ENST00000552465 NFE2L3Q9Y4A8 694 aa17.86■□□□□ 0.45
CACNB3-222ENST00000552465 MEI4A8MW99 385 aa17.85■□□□□ 0.45
CACNB3-222ENST00000552465 CLIC2O15247 247 aa17.85■□□□□ 0.45
CACNB3-222ENST00000552465 DSPP15924 2871 aaKnown RBP17.85■□□□□ 0.45
CACNB3-222ENST00000552465 ATP5C1P36542 298 aaKnown RBP17.85■□□□□ 0.45
CACNB3-222ENST00000552465 CYP2J2P51589 502 aa17.85■□□□□ 0.45
CACNB3-222ENST00000552465 FAM173BQ6P4H8 233 aa17.85■□□□□ 0.45
CACNB3-222ENST00000552465 PDILTQ8N807 584 aa17.85■□□□□ 0.45
CACNB3-222ENST00000552465 XXYLT1Q8NBI6 393 aa17.85■□□□□ 0.45
CACNB3-222ENST00000552465 CADM4Q8NFZ8 388 aa17.85■□□□□ 0.45
CACNB3-222ENST00000552465 SETD7Q8WTS6 366 aaKnown RBP17.85■□□□□ 0.45
CACNB3-222ENST00000552465 SMOQ99835 787 aa17.85■□□□□ 0.45
CACNB3-222ENST00000552465 GPR174Q9BXC1 333 aa17.85■□□□□ 0.45
CACNB3-222ENST00000552465 FBXO44Q9H4M3 255 aa17.85■□□□□ 0.45
CACNB3-222ENST00000552465 VRTNQ9H8Y1 702 aa17.85■□□□□ 0.45
CACNB3-222ENST00000552465 IL21RQ9HBE5 538 aa17.85■□□□□ 0.45
CACNB3-222ENST00000552465 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms