RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 MPP3Q13368 585 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 SPIDRQ14159 915 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 GPR68Q15743 365 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 ADRM1Q16186 407 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 TCP11X2Q5H9J9 407 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 PRAMEF18Q5VWM3 479 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 PRAMEF9Q5VWM5 478 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 TAF2Q6P1X5 1199 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 H1FNTQ75WM6 255 aaPredicted RBP4.51□□□□□ -1.69
USP44-208ENST00000552440 C17orf53Q8N3J3 647 aaPredicted RBP4.51□□□□□ -1.69
USP44-208ENST00000552440 TXNDC5Q8NBS9 432 aaKnown RBP4.51□□□□□ -1.69
USP44-208ENST00000552440 HIPK4Q8NE63 616 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 ZNF653Q96CK0 615 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 NMD3Q96D46 503 aaKnown RBP4.51□□□□□ -1.69
USP44-208ENST00000552440 CNDP1Q96KN2 507 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 C8orf49Q96NF6 230 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 DACH2Q96NX9 599 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 CLIC6Q96NY7 704 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 ATP6V0BQ99437 205 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 P2RX7Q99572 595 aaKnown RBP4.51□□□□□ -1.69
USP44-208ENST00000552440 PRPF18Q99633 342 aaKnown RBP4.51□□□□□ -1.69
USP44-208ENST00000552440 FOXB1Q99853 325 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 PAIP2Q9BPZ3 127 aaKnown RBP4.51□□□□□ -1.69
USP44-208ENST00000552440 REEP2Q9BRK0 252 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 ABHD16BQ9H3Z7 469 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 BRF2Q9HAW0 419 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 PRDM8Q9NQV8 689 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 CPA4Q9UI42 421 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 HPCAL4Q9UM19 191 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 C2CD2Q9Y426 696 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 CDY2AQ9Y6F7 541 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 A8MXE2 369 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 FCHO1O14526 889 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 MATN3O15232 486 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 PALMO75781 387 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 MT-ND5P03915 603 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 TUBB4AP04350 444 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 CYP1A1P04798 512 aaPredicted RBP4.51□□□□□ -1.69
USP44-208ENST00000552440 PRKCBP05771 671 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 TM4SF1P30408 202 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 HOXA11P31270 313 aaPredicted RBP4.51□□□□□ -1.69
USP44-208ENST00000552440 GPC3P51654 580 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 RRP1P56182 461 aaKnown RBP4.51□□□□□ -1.69
USP44-208ENST00000552440 SLC26A5P58743 744 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 AP2B1P63010 937 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 GRIN1Q05586 938 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 FSTL1Q12841 308 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 ADAM9Q13443 819 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 RABEP1Q15276 862 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 PRAMEF14Q5SWL7 426 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 SLFN12LQ6IEE8 588 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 MFSD5Q6N075 450 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 MTFR2Q6P444 385 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 RUFY3Q7L099 469 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.51□□□□□ -1.69
USP44-208ENST00000552440 KIAA2013Q8IYS2 634 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 TMEM57Q8N5G2 664 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 C10orf53Q8N6V4 93 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 ANKRD20A12PQ8NF67 263 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 OR14C36Q8NHC7 312 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 SCAMP5Q8TAC9 235 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 CTNNBL1Q8WYA6 563 aaPredicted RBP4.51□□□□□ -1.69
USP44-208ENST00000552440 SHC3Q92529 594 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 DPF2Q92785 391 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 FATE1Q969F0 183 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 VPS33AQ96AX1 596 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 LRRC46Q96FV0 321 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 FAM167AQ96KS9 214 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 CITED2Q99967 270 aaPredicted RBP4.51□□□□□ -1.69
USP44-208ENST00000552440 NTPCRQ9BSD7 190 aaKnown RBP4.51□□□□□ -1.69
USP44-208ENST00000552440 C1orf21Q9H246 121 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 THAP9Q9H5L6 903 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 RPAP3Q9H6T3 665 aaPredicted RBP4.51□□□□□ -1.69
USP44-208ENST00000552440 L2HGDHQ9H9P8 463 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 RGL1Q9NZL6 768 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 AKAP7Q9P0M2 348 aaPredicted RBP4.51□□□□□ -1.69
USP44-208ENST00000552440 SCOCQ9UIL1 159 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 TSC22D4Q9Y3Q8 395 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 KIF3AQ9Y496 699 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 TRIM17Q9Y577 477 aa4.51□□□□□ -1.69
USP44-208ENST00000552440 MYPNQ86TC9 1320 aa4.5□□□□□ -1.69
USP44-208ENST00000552440 PRAMEF22A3QJZ6 481 aa4.5□□□□□ -1.69
USP44-208ENST00000552440 H0YAE9 185 aa4.5□□□□□ -1.69
USP44-208ENST00000552440 ADAM20O43506 726 aa4.5□□□□□ -1.69
USP44-208ENST00000552440 AKAP8O43823 692 aaKnown RBP4.5□□□□□ -1.69
USP44-208ENST00000552440 KINO60870 393 aaKnown RBP4.5□□□□□ -1.69
USP44-208ENST00000552440 ANXA1P04083 346 aa4.5□□□□□ -1.69
USP44-208ENST00000552440 HEXBP07686 556 aa4.5□□□□□ -1.69
USP44-208ENST00000552440 TYRP14679 529 aa4.5□□□□□ -1.69
USP44-208ENST00000552440 PTPN2P17706 415 aa4.5□□□□□ -1.69
USP44-208ENST00000552440 GABRB3P28472 473 aa4.5□□□□□ -1.69
USP44-208ENST00000552440 TCF7P36402 384 aaPredicted RBP4.5□□□□□ -1.69
USP44-208ENST00000552440 PSMB10P40306 273 aa4.5□□□□□ -1.69
USP44-208ENST00000552440 PSMC4P43686 418 aa4.5□□□□□ -1.69
USP44-208ENST00000552440 RGS3P49796 1198 aa4.5□□□□□ -1.69
USP44-208ENST00000552440 SLC12A3P55017 1021 aa4.5□□□□□ -1.69
USP44-208ENST00000552440 ITGA1P56199 1179 aa4.5□□□□□ -1.69
USP44-208ENST00000552440 ROM1Q03395 351 aa4.5□□□□□ -1.69
USP44-208ENST00000552440 NFE2L1Q14494 772 aa4.5□□□□□ -1.69
USP44-208ENST00000552440 ARL6IP4Q66PJ3 421 aaKnown RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms