RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 ZFRQ96KR1 1074 aaKnown RBP12.69□□□□□ -0.38
ERBB3-219ENST00000551242 IFT122Q9HBG6 1241 aa12.69□□□□□ -0.38
ERBB3-219ENST00000551242 FOCADQ5VW36 1801 aa12.68□□□□□ -0.38
ERBB3-219ENST00000551242 ARHGAP10A1A4S6 786 aa12.68□□□□□ -0.38
ERBB3-219ENST00000551242 TMEM221A6NGB7 291 aa12.68□□□□□ -0.38
ERBB3-219ENST00000551242 TNFAIP8O95379 198 aa12.68□□□□□ -0.38
ERBB3-219ENST00000551242 C1QAP02745 245 aa12.68□□□□□ -0.38
ERBB3-219ENST00000551242 ITGB5P18084 799 aa12.68□□□□□ -0.38
ERBB3-219ENST00000551242 TNNI1P19237 187 aa12.68□□□□□ -0.38
ERBB3-219ENST00000551242 STT3AP46977 705 aa12.68□□□□□ -0.38
ERBB3-219ENST00000551242 NPTX2P47972 431 aa12.68□□□□□ -0.38
ERBB3-219ENST00000551242 ATXN3P54252 364 aaPredicted RBP12.68□□□□□ -0.38
ERBB3-219ENST00000551242 JAG1P78504 1218 aa12.68□□□□□ -0.38
ERBB3-219ENST00000551242 C1QBPQ07021 282 aaKnown RBP12.68□□□□□ -0.38
ERBB3-219ENST00000551242 UGCGQ16739 394 aa12.68□□□□□ -0.38
ERBB3-219ENST00000551242 SLC44A4Q53GD3 710 aa12.68□□□□□ -0.38
ERBB3-219ENST00000551242 CYP4A22Q5TCH4 519 aa12.68□□□□□ -0.38
ERBB3-219ENST00000551242 TATDN1Q6P1N9 297 aa12.68□□□□□ -0.38
ERBB3-219ENST00000551242 DNAJC24Q6P3W2 148 aa12.68□□□□□ -0.38
ERBB3-219ENST00000551242 ATG14Q6ZNE5 492 aa12.68□□□□□ -0.38
ERBB3-219ENST00000551242 MAVSQ7Z434 540 aa12.68□□□□□ -0.38
ERBB3-219ENST00000551242 WDR75Q8IWA0 830 aaKnown RBP12.68□□□□□ -0.38
ERBB3-219ENST00000551242 NUP93Q8N1F7 819 aa12.68□□□□□ -0.38
ERBB3-219ENST00000551242 FBXW8Q8N3Y1 598 aa12.68□□□□□ -0.38
ERBB3-219ENST00000551242 FNDC8Q8TC99 324 aa12.68□□□□□ -0.38
ERBB3-219ENST00000551242 TMIGD2Q96BF3 282 aa12.68□□□□□ -0.38
ERBB3-219ENST00000551242 VCPIP1Q96JH7 1222 aa12.68□□□□□ -0.38
ERBB3-219ENST00000551242 APOBEC3GQ9HC16 384 aaKnown RBP12.68□□□□□ -0.38
ERBB3-219ENST00000551242 THAP1Q9NVV9 213 aa12.68□□□□□ -0.38
ERBB3-219ENST00000551242 TTLL3Q9Y4R7 772 aa12.68□□□□□ -0.38
ERBB3-219ENST00000551242 CEPT1Q9Y6K0 416 aa12.68□□□□□ -0.38
ERBB3-219ENST00000551242 P4HBP07237 508 aaKnown RBP12.68□□□□□ -0.38
ERBB3-219ENST00000551242 KCNA4P22459 653 aa12.68□□□□□ -0.38
ERBB3-219ENST00000551242 MMP8P22894 467 aa12.68□□□□□ -0.38
ERBB3-219ENST00000551242 ATP2B4P23634 1241 aa12.68□□□□□ -0.38
ERBB3-219ENST00000551242 IL1R2P27930 398 aa12.68□□□□□ -0.38
ERBB3-219ENST00000551242 YWHABP31946 246 aaKnown RBP12.68□□□□□ -0.38
ERBB3-219ENST00000551242 HDAC4P56524 1084 aa12.68□□□□□ -0.38
ERBB3-219ENST00000551242 RPL10AP62906 217 aaKnown RBP12.68□□□□□ -0.38
ERBB3-219ENST00000551242 CDKL1Q00532 357 aa12.68□□□□□ -0.38
ERBB3-219ENST00000551242 PPP6R3Q5H9R7 873 aaPredicted RBP12.68□□□□□ -0.38
ERBB3-219ENST00000551242 FAXCQ5TGI0 409 aa12.68□□□□□ -0.38
ERBB3-219ENST00000551242 ANGEL2Q5VTE6 544 aaKnown RBP12.68□□□□□ -0.38
ERBB3-219ENST00000551242 PIWIL2Q8TC59 973 aaKnown RBP12.68□□□□□ -0.38
ERBB3-219ENST00000551242 GJD4Q96KN9 370 aaPredicted RBP12.68□□□□□ -0.38
ERBB3-219ENST00000551242 PNPOQ9NVS9 261 aa12.68□□□□□ -0.38
ERBB3-219ENST00000551242 HNRNPDLO14979 420 aaKnown RBP12.67□□□□□ -0.38
ERBB3-219ENST00000551242 RBP3P10745 1247 aa12.67□□□□□ -0.38
ERBB3-219ENST00000551242 NELFEP18615 380 aaKnown RBP12.67□□□□□ -0.38
ERBB3-219ENST00000551242 EIF4BP23588 611 aaKnown RBP12.67□□□□□ -0.38
ERBB3-219ENST00000551242 EIF3EP60228 445 aaKnown RBP12.67□□□□□ -0.38
ERBB3-219ENST00000551242 MRPS22P82650 360 aaKnown RBP12.67□□□□□ -0.38
ERBB3-219ENST00000551242 MTA1Q13330 715 aa12.67□□□□□ -0.38
ERBB3-219ENST00000551242 CYTH1Q15438 398 aa12.67□□□□□ -0.38
ERBB3-219ENST00000551242 AOC3Q16853 763 aa12.67□□□□□ -0.38
ERBB3-219ENST00000551242 FASTKD1Q53R41 847 aaKnown RBP12.67□□□□□ -0.38
ERBB3-219ENST00000551242 LRRC38Q5VT99 294 aa12.67□□□□□ -0.38
ERBB3-219ENST00000551242 TDRD10Q5VZ19 366 aaKnown RBP12.67□□□□□ -0.38
ERBB3-219ENST00000551242 BSNDQ8WZ55 320 aa12.67□□□□□ -0.38
ERBB3-219ENST00000551242 Q9H521 79 aa12.67□□□□□ -0.38
ERBB3-219ENST00000551242 ITGA11Q9UKX5 1188 aa12.67□□□□□ -0.38
ERBB3-219ENST00000551242 PAIP2BQ9ULR5 123 aaKnown RBP12.67□□□□□ -0.38
ERBB3-219ENST00000551242 FAF1Q9UNN5 650 aaPredicted RBP12.67□□□□□ -0.38
ERBB3-219ENST00000551242 EXOC7Q9UPT5 735 aa12.67□□□□□ -0.38
ERBB3-219ENST00000551242 GNEQ9Y223 722 aaKnown RBP12.67□□□□□ -0.38
ERBB3-219ENST00000551242 PTPRJQ12913 1337 aa12.67□□□□□ -0.38
ERBB3-219ENST00000551242 H0YIN7 160 aa12.67□□□□□ -0.38
ERBB3-219ENST00000551242 DCXO43602 365 aa12.67□□□□□ -0.38
ERBB3-219ENST00000551242 RPS6KA4O75676 772 aa12.67□□□□□ -0.38
ERBB3-219ENST00000551242 KLHL2O95198 593 aa12.67□□□□□ -0.38
ERBB3-219ENST00000551242 CSH1P0DML2 217 aa12.67□□□□□ -0.38
ERBB3-219ENST00000551242 CSH2P0DML3 217 aa12.67□□□□□ -0.38
ERBB3-219ENST00000551242 RPL26P61254 145 aaKnown RBP12.67□□□□□ -0.38
ERBB3-219ENST00000551242 NPNTQ6UXI9 565 aa12.67□□□□□ -0.38
ERBB3-219ENST00000551242 MAP4K3Q8IVH8 894 aa12.67□□□□□ -0.38
ERBB3-219ENST00000551242 ADGRF2Q8IZF7 708 aa12.67□□□□□ -0.38
ERBB3-219ENST00000551242 CNKSR2Q8WXI2 1034 aa12.67□□□□□ -0.38
ERBB3-219ENST00000551242 COPS7BQ9H9Q2 264 aaPredicted RBP12.67□□□□□ -0.38
ERBB3-219ENST00000551242 INIPQ9NRY2 104 aa12.67□□□□□ -0.38
ERBB3-219ENST00000551242 KCNH7Q9NS40 1196 aa12.67□□□□□ -0.38
ERBB3-219ENST00000551242 PSMD13Q9UNM6 376 aa12.67□□□□□ -0.38
ERBB3-219ENST00000551242 GREB1LQ9C091 1923 aaPredicted RBP12.67□□□□□ -0.38
ERBB3-219ENST00000551242 HMX2A2RU54 273 aa12.66□□□□□ -0.38
ERBB3-219ENST00000551242 FBXO21O94952 628 aa12.66□□□□□ -0.38
ERBB3-219ENST00000551242 VIL1P09327 827 aaKnown RBP12.66□□□□□ -0.38
ERBB3-219ENST00000551242 L1CAMP32004 1257 aa12.66□□□□□ -0.38
ERBB3-219ENST00000551242 CUL2Q13617 745 aa12.66□□□□□ -0.38
ERBB3-219ENST00000551242 APOFQ13790 326 aa12.66□□□□□ -0.38
ERBB3-219ENST00000551242 TAF5Q15542 800 aa12.66□□□□□ -0.38
ERBB3-219ENST00000551242 ZNF394Q53GI3 561 aa12.66□□□□□ -0.38
ERBB3-219ENST00000551242 XKR9Q5GH70 373 aa12.66□□□□□ -0.38
ERBB3-219ENST00000551242 TEDDM1Q5T9Z0 273 aa12.66□□□□□ -0.38
ERBB3-219ENST00000551242 APOBEC3HQ6NTF7 200 aaKnown RBP12.66□□□□□ -0.38
ERBB3-219ENST00000551242 TRIM72Q6ZMU5 477 aa12.66□□□□□ -0.38
ERBB3-219ENST00000551242 AHI1Q8N157 1196 aa12.66□□□□□ -0.38
ERBB3-219ENST00000551242 GRIN3AQ8TCU5 1115 aa12.66□□□□□ -0.38
ERBB3-219ENST00000551242 ZNF606Q8WXB4 792 aa12.66□□□□□ -0.38
ERBB3-219ENST00000551242 GMCL1Q96IK5 515 aa12.66□□□□□ -0.38
ERBB3-219ENST00000551242 LRGUKQ96M69 825 aa12.66□□□□□ -0.38
ERBB3-219ENST00000551242 FBXL18Q96ME1 805 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms