RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 TLR5O60602 858 aa13.59□□□□□ -0.23
PTCH1-221ENST00000550914 SLFN14P0C7P3 912 aa13.59□□□□□ -0.23
PTCH1-221ENST00000550914 NTSR1P30989 418 aa13.59□□□□□ -0.23
PTCH1-221ENST00000550914 PTGER3P43115 390 aa13.59□□□□□ -0.23
PTCH1-221ENST00000550914 AFMP43652 599 aa13.59□□□□□ -0.23
PTCH1-221ENST00000550914 ME1P48163 572 aa13.59□□□□□ -0.23
PTCH1-221ENST00000550914 GOLGA8FQ08AF8 430 aa13.59□□□□□ -0.23
PTCH1-221ENST00000550914 GOLGA8DPQ0D2H9 430 aa13.59□□□□□ -0.23
PTCH1-221ENST00000550914 ANO4Q32M45 955 aa13.59□□□□□ -0.23
PTCH1-221ENST00000550914 KLHDC10Q6PID8 442 aa13.59□□□□□ -0.23
PTCH1-221ENST00000550914 SCARA5Q6ZMJ2 495 aa13.59□□□□□ -0.23
PTCH1-221ENST00000550914 ACOT1Q86TX2 421 aa13.59□□□□□ -0.23
PTCH1-221ENST00000550914 TMEM25Q86YD3 366 aa13.59□□□□□ -0.23
PTCH1-221ENST00000550914 PGBD3Q8N328 593 aa13.59□□□□□ -0.23
PTCH1-221ENST00000550914 ZMIZ2Q8NF64 920 aa13.59□□□□□ -0.23
PTCH1-221ENST00000550914 CEP76Q8TAP6 659 aa13.59□□□□□ -0.23
PTCH1-221ENST00000550914 SLC2A14Q8TDB8 520 aa13.59□□□□□ -0.23
PTCH1-221ENST00000550914 BACH2Q9BYV9 841 aa13.59□□□□□ -0.23
PTCH1-221ENST00000550914 PNPLA8Q9NP80 782 aa13.59□□□□□ -0.23
PTCH1-221ENST00000550914 CYLDQ9NQC7 956 aa13.59□□□□□ -0.23
PTCH1-221ENST00000550914 MARK1Q9P0L2 795 aa13.59□□□□□ -0.23
PTCH1-221ENST00000550914 PILRBQ9UKJ0 227 aa13.59□□□□□ -0.23
PTCH1-221ENST00000550914 PCDH15Q96QU1 1955 aa13.58□□□□□ -0.24
PTCH1-221ENST00000550914 TMEM8BA6NDV4 472 aa13.58□□□□□ -0.24
PTCH1-221ENST00000550914 CACNG3O60359 315 aa13.58□□□□□ -0.24
PTCH1-221ENST00000550914 GREM1O60565 184 aa13.58□□□□□ -0.24
PTCH1-221ENST00000550914 ZNF217O75362 1048 aa13.58□□□□□ -0.24
PTCH1-221ENST00000550914 CLSTN1O94985 981 aa13.58□□□□□ -0.24
PTCH1-221ENST00000550914 ASS1P00966 412 aaKnown RBP13.58□□□□□ -0.24
PTCH1-221ENST00000550914 MYL1P05976 194 aa13.58□□□□□ -0.24
PTCH1-221ENST00000550914 FAM200BP0CF97 657 aa13.58□□□□□ -0.24
PTCH1-221ENST00000550914 ZSCAN22P10073 491 aaPredicted RBP13.58□□□□□ -0.24
PTCH1-221ENST00000550914 CCDC130P13994 396 aa13.58□□□□□ -0.24
PTCH1-221ENST00000550914 HOXB2P14652 356 aa13.58□□□□□ -0.24
PTCH1-221ENST00000550914 ATP5C1P36542 298 aaKnown RBP13.58□□□□□ -0.24
PTCH1-221ENST00000550914 NDST1P52848 882 aa13.58□□□□□ -0.24
PTCH1-221ENST00000550914 STK4Q13043 487 aa13.58□□□□□ -0.24
PTCH1-221ENST00000550914 DUOXA1Q1HG43 343 aa13.58□□□□□ -0.24
PTCH1-221ENST00000550914 C10orf76Q5T2E6 689 aa13.58□□□□□ -0.24
PTCH1-221ENST00000550914 GRAMD4Q6IC98 578 aa13.58□□□□□ -0.24
PTCH1-221ENST00000550914 UNQ6494/PRO21346Q6UXR6 183 aa13.58□□□□□ -0.24
PTCH1-221ENST00000550914 NAT16Q8N8M0 369 aa13.58□□□□□ -0.24
PTCH1-221ENST00000550914 KDF1Q8NAX2 398 aaPredicted RBP13.58□□□□□ -0.24
PTCH1-221ENST00000550914 KIAA0895Q8NCT3 520 aa13.58□□□□□ -0.24
PTCH1-221ENST00000550914 SNX21Q969T3 373 aa13.58□□□□□ -0.24
PTCH1-221ENST00000550914 XPO6Q96QU8 1125 aaKnown RBP13.58□□□□□ -0.24
PTCH1-221ENST00000550914 KLF16Q9BXK1 252 aaPredicted RBP13.58□□□□□ -0.24
PTCH1-221ENST00000550914 KCTD10Q9H3F6 313 aa13.58□□□□□ -0.24
PTCH1-221ENST00000550914 SLC32A1Q9H598 525 aa13.58□□□□□ -0.24
PTCH1-221ENST00000550914 TMEM74BQ9NUR3 256 aa13.58□□□□□ -0.24
PTCH1-221ENST00000550914 EXOC1Q9NV70 894 aa13.58□□□□□ -0.24
PTCH1-221ENST00000550914 WDR35Q9P2L0 1181 aa13.58□□□□□ -0.24
PTCH1-221ENST00000550914 LSM7Q9UK45 103 aaKnown RBP13.58□□□□□ -0.24
PTCH1-221ENST00000550914 CFAP45Q9UL16 551 aa13.58□□□□□ -0.24
PTCH1-221ENST00000550914 CIZ1Q9ULV3 898 aaPredicted RBP13.58□□□□□ -0.24
PTCH1-221ENST00000550914 SCML2Q9UQR0 700 aa13.58□□□□□ -0.24
PTCH1-221ENST00000550914 PCDHA5Q9Y5H7 936 aa13.58□□□□□ -0.24
PTCH1-221ENST00000550914 NBEAQ8NFP9 2946 aa13.58□□□□□ -0.24
PTCH1-221ENST00000550914 FREM2Q5SZK8 3169 aa13.58□□□□□ -0.24
PTCH1-221ENST00000550914 A0A1W2PQF6 199 aa13.57□□□□□ -0.24
PTCH1-221ENST00000550914 MAPK13O15264 365 aa13.57□□□□□ -0.24
PTCH1-221ENST00000550914 ZBTB24O43167 697 aaPredicted RBP13.57□□□□□ -0.24
PTCH1-221ENST00000550914 BEST1O76090 585 aa13.57□□□□□ -0.24
PTCH1-221ENST00000550914 F13A1P00488 732 aa13.57□□□□□ -0.24
PTCH1-221ENST00000550914 NR3C1P04150 777 aa13.57□□□□□ -0.24
PTCH1-221ENST00000550914 ENGP17813 658 aa13.57□□□□□ -0.24
PTCH1-221ENST00000550914 GABRG2P18507 467 aa13.57□□□□□ -0.24
PTCH1-221ENST00000550914 ASPAP45381 313 aa13.57□□□□□ -0.24
PTCH1-221ENST00000550914 MAP3K7CLP57077 242 aa13.57□□□□□ -0.24
PTCH1-221ENST00000550914 ENPEPQ07075 957 aa13.57□□□□□ -0.24
PTCH1-221ENST00000550914 INCA1Q0VD86 236 aa13.57□□□□□ -0.24
PTCH1-221ENST00000550914 FOXC1Q12948 553 aa13.57□□□□□ -0.24
PTCH1-221ENST00000550914 UAP1L1Q3KQV9 507 aa13.57□□□□□ -0.24
PTCH1-221ENST00000550914 SDE2Q6IQ49 451 aa13.57□□□□□ -0.24
PTCH1-221ENST00000550914 SV2AQ7L0J3 742 aa13.57□□□□□ -0.24
PTCH1-221ENST00000550914 ARMCX6Q7L4S7 300 aa13.57□□□□□ -0.24
PTCH1-221ENST00000550914 ZNF276Q8N554 614 aa13.57□□□□□ -0.24
PTCH1-221ENST00000550914 FRMD1Q8N878 549 aa13.57□□□□□ -0.24
PTCH1-221ENST00000550914 WBP2Q969T9 261 aa13.57□□□□□ -0.24
PTCH1-221ENST00000550914 HNRNPABQ99729 332 aaKnown RBP13.57□□□□□ -0.24
PTCH1-221ENST00000550914 CD248Q9HCU0 757 aa13.57□□□□□ -0.24
PTCH1-221ENST00000550914 ZDHHC4Q9NPG8 344 aa13.57□□□□□ -0.24
PTCH1-221ENST00000550914 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.57□□□□□ -0.24
PTCH1-221ENST00000550914 DNAJC17Q9NVM6 304 aaKnown RBP13.57□□□□□ -0.24
PTCH1-221ENST00000550914 CALCOCO1Q9P1Z2 691 aa13.57□□□□□ -0.24
PTCH1-221ENST00000550914 USP25Q9UHP3 1055 aa13.57□□□□□ -0.24
PTCH1-221ENST00000550914 HCN2Q9UL51 889 aa13.57□□□□□ -0.24
PTCH1-221ENST00000550914 SLC6A14Q9UN76 642 aa13.57□□□□□ -0.24
PTCH1-221ENST00000550914 FRMD4BQ9Y2L6 1034 aa13.57□□□□□ -0.24
PTCH1-221ENST00000550914 ITPR1Q14643 2758 aa13.57□□□□□ -0.24
PTCH1-221ENST00000550914 KNL1Q8NG31 2342 aa13.57□□□□□ -0.24
PTCH1-221ENST00000550914 GFRA2O00451 464 aa13.56□□□□□ -0.24
PTCH1-221ENST00000550914 ACTN4O43707 911 aaKnown RBP13.56□□□□□ -0.24
PTCH1-221ENST00000550914 SERPINF2P08697 491 aa13.56□□□□□ -0.24
PTCH1-221ENST00000550914 IRF1P10914 325 aa13.56□□□□□ -0.24
PTCH1-221ENST00000550914 TYRP14679 529 aa13.56□□□□□ -0.24
PTCH1-221ENST00000550914 ITPKAP23677 461 aa13.56□□□□□ -0.24
PTCH1-221ENST00000550914 PGFP49763 221 aa13.56□□□□□ -0.24
PTCH1-221ENST00000550914 PSEN1P49768 467 aa13.56□□□□□ -0.24
PTCH1-221ENST00000550914 DLG4P78352 724 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms