RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 TRIM43Q96BQ3 446 aaPredicted RBP5.64□□□□□ -1.51
SCAF11-214ENST00000550893 NACAP1Q9BZK3 213 aa5.64□□□□□ -1.51
SCAF11-214ENST00000550893 QRSL1Q9H0R6 528 aaKnown RBP5.64□□□□□ -1.51
SCAF11-214ENST00000550893 C11orf49Q9H6J7 331 aa5.64□□□□□ -1.51
SCAF11-214ENST00000550893 JMJD4Q9H9V9 463 aa5.64□□□□□ -1.51
SCAF11-214ENST00000550893 LY9Q9HBG7 655 aa5.64□□□□□ -1.51
SCAF11-214ENST00000550893 HOMER2Q9NSB8 354 aa5.64□□□□□ -1.51
SCAF11-214ENST00000550893 ZMYND8Q9ULU4 1186 aaPredicted RBP5.64□□□□□ -1.51
SCAF11-214ENST00000550893 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.64□□□□□ -1.51
SCAF11-214ENST00000550893 SORCS3Q9UPU3 1222 aa5.64□□□□□ -1.51
SCAF11-214ENST00000550893 TRIOO75962 3097 aa5.64□□□□□ -1.51
SCAF11-214ENST00000550893 WDR19Q8NEZ3 1342 aa5.64□□□□□ -1.51
SCAF11-214ENST00000550893 NID2Q14112 1375 aa5.64□□□□□ -1.51
SCAF11-214ENST00000550893 BRWD1Q9NSI6 2320 aa5.64□□□□□ -1.51
SCAF11-214ENST00000550893 NLRC5Q86WI3 1866 aa5.64□□□□□ -1.51
SCAF11-214ENST00000550893 TTC28Q96AY4 2481 aa5.63□□□□□ -1.51
SCAF11-214ENST00000550893 ADH4P08319 380 aa5.63□□□□□ -1.51
SCAF11-214ENST00000550893 PCP11498 1178 aaKnown RBP5.63□□□□□ -1.51
SCAF11-214ENST00000550893 FCER1AP12319 257 aa5.63□□□□□ -1.51
SCAF11-214ENST00000550893 CPEP16870 476 aa5.63□□□□□ -1.51
SCAF11-214ENST00000550893 SLC1A4P43007 532 aa5.63□□□□□ -1.51
SCAF11-214ENST00000550893 CDK7P50613 346 aa5.63□□□□□ -1.51
SCAF11-214ENST00000550893 GRM4Q14833 912 aa5.63□□□□□ -1.51
SCAF11-214ENST00000550893 QRICH1Q2TAL8 776 aa5.63□□□□□ -1.51
SCAF11-214ENST00000550893 TRIM60Q495X7 471 aa5.63□□□□□ -1.51
SCAF11-214ENST00000550893 BMP2KLQ5H9B9 411 aa5.63□□□□□ -1.51
SCAF11-214ENST00000550893 CHST3Q7LGC8 479 aa5.63□□□□□ -1.51
SCAF11-214ENST00000550893 GPRIN1Q7Z2K8 1008 aa5.63□□□□□ -1.51
SCAF11-214ENST00000550893 NECAB2Q7Z6G3 386 aa5.63□□□□□ -1.51
SCAF11-214ENST00000550893 FAM160B2Q86V87 743 aa5.63□□□□□ -1.51
SCAF11-214ENST00000550893 DGKHQ86XP1 1220 aa5.63□□□□□ -1.51
SCAF11-214ENST00000550893 FBXO16Q8IX29 292 aaPredicted RBP5.63□□□□□ -1.51
SCAF11-214ENST00000550893 ADGRF4Q8IZF3 695 aa5.63□□□□□ -1.51
SCAF11-214ENST00000550893 AMER2Q8N7J2 671 aa5.63□□□□□ -1.51
SCAF11-214ENST00000550893 MDM1Q8TC05 714 aa5.63□□□□□ -1.51
SCAF11-214ENST00000550893 SLC25A43Q8WUT9 341 aaPredicted RBP5.63□□□□□ -1.51
SCAF11-214ENST00000550893 FAM126AQ9BYI3 521 aaPredicted RBP5.63□□□□□ -1.51
SCAF11-214ENST00000550893 UBA5Q9GZZ9 404 aa5.63□□□□□ -1.51
SCAF11-214ENST00000550893 NRDE2Q9H7Z3 1164 aa5.63□□□□□ -1.51
SCAF11-214ENST00000550893 DIAPH3Q9NSV4 1193 aa5.63□□□□□ -1.51
SCAF11-214ENST00000550893 C14orf119Q9NWQ9 140 aa5.63□□□□□ -1.51
SCAF11-214ENST00000550893 NRBP1Q9UHY1 535 aa5.63□□□□□ -1.51
SCAF11-214ENST00000550893 TBX21Q9UL17 535 aa5.63□□□□□ -1.51
SCAF11-214ENST00000550893 UMODL1Q5DID0 1318 aa5.63□□□□□ -1.51
SCAF11-214ENST00000550893 BDP1A6H8Y1 2624 aa5.62□□□□□ -1.51
SCAF11-214ENST00000550893 SH2B2O14492 632 aaPredicted RBP5.62□□□□□ -1.51
SCAF11-214ENST00000550893 GPR39O43194 453 aa5.62□□□□□ -1.51
SCAF11-214ENST00000550893 EDIL3O43854 480 aa5.62□□□□□ -1.51
SCAF11-214ENST00000550893 PLEKHA8P1O95397 391 aa5.62□□□□□ -1.51
SCAF11-214ENST00000550893 TFRCP02786 760 aaKnown RBP5.62□□□□□ -1.51
SCAF11-214ENST00000550893 ALAS1P13196 640 aa5.62□□□□□ -1.51
SCAF11-214ENST00000550893 POU3F3P20264 500 aaPredicted RBP5.62□□□□□ -1.51
SCAF11-214ENST00000550893 NR4A1P22736 598 aa5.62□□□□□ -1.51
SCAF11-214ENST00000550893 ALDH5A1P51649 535 aaPredicted RBP5.62□□□□□ -1.51
SCAF11-214ENST00000550893 HSD17B4P51659 736 aa5.62□□□□□ -1.51
SCAF11-214ENST00000550893 RPS6P62753 249 aaKnown RBP5.62□□□□□ -1.51
SCAF11-214ENST00000550893 EXOSC10Q01780 885 aaKnown RBP5.62□□□□□ -1.51
SCAF11-214ENST00000550893 ACVR2BQ13705 512 aa5.62□□□□□ -1.51
SCAF11-214ENST00000550893 BAATQ14032 418 aaPredicted RBP5.62□□□□□ -1.51
SCAF11-214ENST00000550893 CSRP2Q16527 193 aa5.62□□□□□ -1.51
SCAF11-214ENST00000550893 CDC37Q16543 378 aaPredicted RBP5.62□□□□□ -1.51
SCAF11-214ENST00000550893 TCTN1Q2MV58 587 aa5.62□□□□□ -1.51
SCAF11-214ENST00000550893 MUM1Q2TAK8 710 aa5.62□□□□□ -1.51
SCAF11-214ENST00000550893 C9orf50Q5SZB4 431 aa5.62□□□□□ -1.51
SCAF11-214ENST00000550893 MFSD14CQ5VZR4 134 aa5.62□□□□□ -1.51
SCAF11-214ENST00000550893 ANKS6Q68DC2 871 aa5.62□□□□□ -1.51
SCAF11-214ENST00000550893 MFSD6Q6ZSS7 791 aa5.62□□□□□ -1.51
SCAF11-214ENST00000550893 ZNF627Q7L945 461 aa5.62□□□□□ -1.51
SCAF11-214ENST00000550893 KCNK18Q7Z418 384 aa5.62□□□□□ -1.51
SCAF11-214ENST00000550893 AMOTL1Q8IY63 956 aa5.62□□□□□ -1.51
SCAF11-214ENST00000550893 ZNF276Q8N554 614 aa5.62□□□□□ -1.51
SCAF11-214ENST00000550893 CPT1CQ8TCG5 803 aa5.62□□□□□ -1.51
SCAF11-214ENST00000550893 AUTS2Q8WXX7 1259 aa5.62□□□□□ -1.51
SCAF11-214ENST00000550893 RIN2Q8WYP3 895 aaPredicted RBP5.62□□□□□ -1.51
SCAF11-214ENST00000550893 TTC14Q96N46 770 aa5.62□□□□□ -1.51
SCAF11-214ENST00000550893 RIOX1Q9H6W3 641 aa5.62□□□□□ -1.51
SCAF11-214ENST00000550893 ACAD9Q9H845 621 aa5.62□□□□□ -1.51
SCAF11-214ENST00000550893 CCPG1Q9ULG6 757 aa5.62□□□□□ -1.51
SCAF11-214ENST00000550893 MYO9BQ13459 2157 aa5.62□□□□□ -1.51
SCAF11-214ENST00000550893 PRR5-ARHGAP8B1AHC4 643 aa5.61□□□□□ -1.51
SCAF11-214ENST00000550893 ZNF213O14771 459 aa5.61□□□□□ -1.51
SCAF11-214ENST00000550893 DUSP11O75319 330 aaKnown RBP5.61□□□□□ -1.51
SCAF11-214ENST00000550893 PRKD3O94806 890 aa5.61□□□□□ -1.51
SCAF11-214ENST00000550893 SCAF4O95104 1147 aaKnown RBP5.61□□□□□ -1.51
SCAF11-214ENST00000550893 GASTP01350 101 aa5.61□□□□□ -1.51
SCAF11-214ENST00000550893 CD4P01730 458 aa5.61□□□□□ -1.51
SCAF11-214ENST00000550893 AKR1A1P14550 325 aa5.61□□□□□ -1.51
SCAF11-214ENST00000550893 CPA1P15085 419 aa5.61□□□□□ -1.51
SCAF11-214ENST00000550893 RXRAP19793 462 aa5.61□□□□□ -1.51
SCAF11-214ENST00000550893 PTGS2P35354 604 aa5.61□□□□□ -1.51
SCAF11-214ENST00000550893 COPB2P35606 906 aa5.61□□□□□ -1.51
SCAF11-214ENST00000550893 GPR3P46089 330 aa5.61□□□□□ -1.51
SCAF11-214ENST00000550893 BEX3Q00994 111 aa5.61□□□□□ -1.51
SCAF11-214ENST00000550893 ARHGAP1Q07960 439 aa5.61□□□□□ -1.51
SCAF11-214ENST00000550893 FAPQ12884 760 aa5.61□□□□□ -1.51
SCAF11-214ENST00000550893 KCTD2Q14681 263 aa5.61□□□□□ -1.51
SCAF11-214ENST00000550893 GPNMBQ14956 572 aa5.61□□□□□ -1.51
SCAF11-214ENST00000550893 CCDC96Q2M329 555 aa5.61□□□□□ -1.51
SCAF11-214ENST00000550893 TOR2AQ5JU69 321 aa5.61□□□□□ -1.51
SCAF11-214ENST00000550893 PRAMEF14Q5SWL7 426 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms