RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 INSL5Q9Y5Q6 135 aa14.78□□□□□ -0.04
CACNB3-216ENST00000550391 MTCL1Q9Y4B5 1905 aaKnown RBP14.78□□□□□ -0.04
CACNB3-216ENST00000550391 MYO16Q9Y6X6 1858 aa14.78□□□□□ -0.04
CACNB3-216ENST00000550391 C2CD4BA6NLJ0 364 aa14.77□□□□□ -0.05
CACNB3-216ENST00000550391 YJEFN3A6XGL0 299 aa14.77□□□□□ -0.05
CACNB3-216ENST00000550391 TMEM110-MUSTN1A8MSY1 372 aa14.77□□□□□ -0.05
CACNB3-216ENST00000550391 E7ENQ6 273 aa14.77□□□□□ -0.05
CACNB3-216ENST00000550391 RFXAPO00287 272 aa14.77□□□□□ -0.05
CACNB3-216ENST00000550391 GRAP2O75791 330 aa14.77□□□□□ -0.05
CACNB3-216ENST00000550391 PROSCO94903 275 aa14.77□□□□□ -0.05
CACNB3-216ENST00000550391 PDGFRAP16234 1089 aa14.77□□□□□ -0.05
CACNB3-216ENST00000550391 GPD1P21695 349 aa14.77□□□□□ -0.05
CACNB3-216ENST00000550391 CASQ1P31415 396 aa14.77□□□□□ -0.05
CACNB3-216ENST00000550391 MAN1A1P33908 653 aa14.77□□□□□ -0.05
CACNB3-216ENST00000550391 FLT3P36888 993 aa14.77□□□□□ -0.05
CACNB3-216ENST00000550391 SLC1A1P43005 524 aa14.77□□□□□ -0.05
CACNB3-216ENST00000550391 EPHB3P54753 998 aa14.77□□□□□ -0.05
CACNB3-216ENST00000550391 ZNF252P-AS1Q0IIN9 211 aa14.77□□□□□ -0.05
CACNB3-216ENST00000550391 TWF1Q12792 350 aa14.77□□□□□ -0.05
CACNB3-216ENST00000550391 IFRD2Q12894 506 aaPredicted RBP14.77□□□□□ -0.05
CACNB3-216ENST00000550391 PLD1Q13393 1074 aa14.77□□□□□ -0.05
CACNB3-216ENST00000550391 MTMR3Q13615 1198 aa14.77□□□□□ -0.05
CACNB3-216ENST00000550391 VEPH1Q14D04 833 aa14.77□□□□□ -0.05
CACNB3-216ENST00000550391 TRNP1Q6NT89 227 aa14.77□□□□□ -0.05
CACNB3-216ENST00000550391 HFE2Q6ZVN8 426 aa14.77□□□□□ -0.05
CACNB3-216ENST00000550391 RTL10Q7L3V2 364 aa14.77□□□□□ -0.05
CACNB3-216ENST00000550391 ADGRD2Q7Z7M1 963 aa14.77□□□□□ -0.05
CACNB3-216ENST00000550391 ARHGAP18Q8N392 663 aa14.77□□□□□ -0.05
CACNB3-216ENST00000550391 EMC1Q8N766 993 aa14.77□□□□□ -0.05
CACNB3-216ENST00000550391 NIPA2Q8N8Q9 360 aa14.77□□□□□ -0.05
CACNB3-216ENST00000550391 KREMEN2Q8NCW0 462 aa14.77□□□□□ -0.05
CACNB3-216ENST00000550391 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.77□□□□□ -0.05
CACNB3-216ENST00000550391 SLC22A17Q8WUG5 538 aa14.77□□□□□ -0.05
CACNB3-216ENST00000550391 RXFP2Q8WXD0 754 aa14.77□□□□□ -0.05
CACNB3-216ENST00000550391 FAM149B1Q96BN6 582 aa14.77□□□□□ -0.05
CACNB3-216ENST00000550391 PHOX2BQ99453 314 aa14.77□□□□□ -0.05
CACNB3-216ENST00000550391 CNPY3Q9BT09 278 aa14.77□□□□□ -0.05
CACNB3-216ENST00000550391 TTLL2Q9BWV7 592 aa14.77□□□□□ -0.05
CACNB3-216ENST00000550391 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.77□□□□□ -0.05
CACNB3-216ENST00000550391 AMFRQ9UKV5 643 aa14.77□□□□□ -0.05
CACNB3-216ENST00000550391 ALG6Q9Y672 507 aa14.77□□□□□ -0.05
CACNB3-216ENST00000550391 C5orf42Q9H799 3197 aa14.77□□□□□ -0.05
CACNB3-216ENST00000550391 CTAGE9A4FU28 777 aa14.76□□□□□ -0.05
CACNB3-216ENST00000550391 DPYSL4O14531 572 aa14.76□□□□□ -0.05
CACNB3-216ENST00000550391 DAB1O75553 588 aa14.76□□□□□ -0.05
CACNB3-216ENST00000550391 FTCDO95954 541 aa14.76□□□□□ -0.05
CACNB3-216ENST00000550391 LTFP02788 710 aa14.76□□□□□ -0.05
CACNB3-216ENST00000550391 FYNP06241 537 aa14.76□□□□□ -0.05
CACNB3-216ENST00000550391 C8AP07357 584 aa14.76□□□□□ -0.05
CACNB3-216ENST00000550391 CSH1P0DML2 217 aa14.76□□□□□ -0.05
CACNB3-216ENST00000550391 CSH2P0DML3 217 aa14.76□□□□□ -0.05
CACNB3-216ENST00000550391 DESP17661 470 aa14.76□□□□□ -0.05
CACNB3-216ENST00000550391 COMTP21964 271 aa14.76□□□□□ -0.05
CACNB3-216ENST00000550391 PSMA2P25787 234 aa14.76□□□□□ -0.05
CACNB3-216ENST00000550391 MATKP42679 507 aa14.76□□□□□ -0.05
CACNB3-216ENST00000550391 ZNF143P52747 638 aaPredicted RBP14.76□□□□□ -0.05
CACNB3-216ENST00000550391 ACAP1Q15027 740 aa14.76□□□□□ -0.05
CACNB3-216ENST00000550391 PTPROQ16827 1216 aa14.76□□□□□ -0.05
CACNB3-216ENST00000550391 BEND5Q7L4P6 421 aa14.76□□□□□ -0.05
CACNB3-216ENST00000550391 PEX26Q7Z412 305 aa14.76□□□□□ -0.05
CACNB3-216ENST00000550391 NT5DC3Q86UY8 548 aa14.76□□□□□ -0.05
CACNB3-216ENST00000550391 MON1AQ86VX9 555 aa14.76□□□□□ -0.05
CACNB3-216ENST00000550391 SLC7A14Q8TBB6 771 aa14.76□□□□□ -0.05
CACNB3-216ENST00000550391 FBXO32Q969P5 355 aa14.76□□□□□ -0.05
CACNB3-216ENST00000550391 MRPL38Q96DV4 380 aaKnown RBP14.76□□□□□ -0.05
CACNB3-216ENST00000550391 SLC2A13Q96QE2 648 aa14.76□□□□□ -0.05
CACNB3-216ENST00000550391 NAPGQ99747 312 aaPredicted RBP14.76□□□□□ -0.05
CACNB3-216ENST00000550391 DDX23Q9BUQ8 820 aaKnown RBP14.76□□□□□ -0.05
CACNB3-216ENST00000550391 GOLPH3Q9H4A6 298 aa14.76□□□□□ -0.05
CACNB3-216ENST00000550391 PLEKHA4Q9H4M7 779 aa14.76□□□□□ -0.05
CACNB3-216ENST00000550391 POPDC2Q9HBU9 364 aa14.76□□□□□ -0.05
CACNB3-216ENST00000550391 ZNF638Q14966 1978 aaKnown RBP14.76□□□□□ -0.05
CACNB3-216ENST00000550391 PER2O15055 1255 aa14.75□□□□□ -0.05
CACNB3-216ENST00000550391 FANCGO15287 622 aa14.75□□□□□ -0.05
CACNB3-216ENST00000550391 GFRA3O60609 400 aa14.75□□□□□ -0.05
CACNB3-216ENST00000550391 EPCAMP16422 314 aa14.75□□□□□ -0.05
CACNB3-216ENST00000550391 HMGA1P17096 107 aaKnown RBP14.75□□□□□ -0.05
CACNB3-216ENST00000550391 SDC4P31431 198 aa14.75□□□□□ -0.05
CACNB3-216ENST00000550391 NOS2P35228 1153 aa14.75□□□□□ -0.05
CACNB3-216ENST00000550391 YWHAGP61981 247 aaKnown RBP eCLIP14.75□□□□□ -0.05
CACNB3-216ENST00000550391 TAF12Q16514 161 aa14.75□□□□□ -0.05
CACNB3-216ENST00000550391 CCDC14Q49A88 953 aa14.75□□□□□ -0.05
CACNB3-216ENST00000550391 MEI1Q5TIA1 1274 aa14.75□□□□□ -0.05
CACNB3-216ENST00000550391 BSPRYQ5W0U4 402 aa14.75□□□□□ -0.05
CACNB3-216ENST00000550391 SCD5Q86SK9 330 aa14.75□□□□□ -0.05
CACNB3-216ENST00000550391 ITIH5Q86UX2 942 aa14.75□□□□□ -0.05
CACNB3-216ENST00000550391 DEFB106AQ8N104 65 aa14.75□□□□□ -0.05
CACNB3-216ENST00000550391 KIF18AQ8NI77 898 aa14.75□□□□□ -0.05
CACNB3-216ENST00000550391 HDAC7Q8WUI4 952 aa14.75□□□□□ -0.05
CACNB3-216ENST00000550391 ZNF592Q92610 1267 aa14.75□□□□□ -0.05
CACNB3-216ENST00000550391 PSMG2Q969U7 264 aa14.75□□□□□ -0.05
CACNB3-216ENST00000550391 TRMT2BQ96GJ1 504 aaKnown RBP14.75□□□□□ -0.05
CACNB3-216ENST00000550391 MYRFLQ96LU7 910 aa14.75□□□□□ -0.05
CACNB3-216ENST00000550391 NCAPGQ9BPX3 1015 aa14.75□□□□□ -0.05
CACNB3-216ENST00000550391 RRN3Q9NYV6 651 aa14.75□□□□□ -0.05
CACNB3-216ENST00000550391 LMCD1Q9NZU5 365 aa14.75□□□□□ -0.05
CACNB3-216ENST00000550391 DPP7Q9UHL4 492 aa14.75□□□□□ -0.05
CACNB3-216ENST00000550391 ASB3Q9Y575 518 aa14.75□□□□□ -0.05
CACNB3-216ENST00000550391 CAPN9O14815 690 aa14.74□□□□□ -0.05
CACNB3-216ENST00000550391 SPOPO43791 374 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms