RNA–Protein interactions for RNA: ENST00000550274.1

LETMD1-222, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-222ENST00000550274 DEC1Q9P2X7 70 aa13.33□□□□□ -0.28
LETMD1-222ENST00000550274 HMGXB4Q9UGU5 601 aa13.33□□□□□ -0.28
LETMD1-222ENST00000550274 ATP8B3O60423 1300 aa13.33□□□□□ -0.28
LETMD1-222ENST00000550274 PLXNB3Q9ULL4 1909 aa13.33□□□□□ -0.28
LETMD1-222ENST00000550274 TMEM131Q92545 1883 aa13.32□□□□□ -0.28
LETMD1-222ENST00000550274 KNL1Q8NG31 2342 aa13.32□□□□□ -0.28
LETMD1-222ENST00000550274 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.32□□□□□ -0.28
LETMD1-222ENST00000550274 SPAARA0A1B0GVQ0 90 aa13.32□□□□□ -0.28
LETMD1-222ENST00000550274 A0A1W2PQF6 199 aa13.32□□□□□ -0.28
LETMD1-222ENST00000550274 LRRIQ3A6PVS8 624 aaPredicted RBP13.32□□□□□ -0.28
LETMD1-222ENST00000550274 GREM1O60565 184 aa13.32□□□□□ -0.28
LETMD1-222ENST00000550274 EXOC3O60645 756 aa13.32□□□□□ -0.28
LETMD1-222ENST00000550274 CUTAO60888 179 aa13.32□□□□□ -0.28
LETMD1-222ENST00000550274 AP1G2O75843 785 aa13.32□□□□□ -0.28
LETMD1-222ENST00000550274 VNN1O95497 513 aa13.32□□□□□ -0.28
LETMD1-222ENST00000550274 CFIP05156 583 aa13.32□□□□□ -0.28
LETMD1-222ENST00000550274 CCDC130P13994 396 aa13.32□□□□□ -0.28
LETMD1-222ENST00000550274 HOXB2P14652 356 aa13.32□□□□□ -0.28
LETMD1-222ENST00000550274 RPL6Q02878 288 aaKnown RBP13.32□□□□□ -0.28
LETMD1-222ENST00000550274 NCOA4Q13772 614 aa13.32□□□□□ -0.28
LETMD1-222ENST00000550274 ZNF667Q5HYK9 610 aa13.32□□□□□ -0.28
LETMD1-222ENST00000550274 SPDYCQ5MJ68 293 aa13.32□□□□□ -0.28
LETMD1-222ENST00000550274 BTBD8Q5XKL5 378 aa13.32□□□□□ -0.28
LETMD1-222ENST00000550274 EGFLAMQ63HQ2 1017 aa13.32□□□□□ -0.28
LETMD1-222ENST00000550274 ACOT1Q86TX2 421 aa13.32□□□□□ -0.28
LETMD1-222ENST00000550274 PIP4P2Q8N4L2 257 aa13.32□□□□□ -0.28
LETMD1-222ENST00000550274 KCNV2Q8TDN2 545 aa13.32□□□□□ -0.28
LETMD1-222ENST00000550274 PARD3BQ8TEW8 1205 aa13.32□□□□□ -0.28
LETMD1-222ENST00000550274 ERLEC1Q96DZ1 483 aa13.32□□□□□ -0.28
LETMD1-222ENST00000550274 ACOX2Q99424 681 aa13.32□□□□□ -0.28
LETMD1-222ENST00000550274 SMOQ99835 787 aa13.32□□□□□ -0.28
LETMD1-222ENST00000550274 CD248Q9HCU0 757 aa13.32□□□□□ -0.28
LETMD1-222ENST00000550274 POLR2DO15514 142 aaKnown RBP13.31□□□□□ -0.28
LETMD1-222ENST00000550274 AP5Z1O43299 807 aa13.31□□□□□ -0.28
LETMD1-222ENST00000550274 HYAL3O43820 417 aaPredicted RBP13.31□□□□□ -0.28
LETMD1-222ENST00000550274 TLR5O60602 858 aa13.31□□□□□ -0.28
LETMD1-222ENST00000550274 CLSTN1O94985 981 aa13.31□□□□□ -0.28
LETMD1-222ENST00000550274 YEATS4O95619 227 aa13.31□□□□□ -0.28
LETMD1-222ENST00000550274 TBX18O95935 607 aa13.31□□□□□ -0.28
LETMD1-222ENST00000550274 C4BPAP04003 597 aaKnown RBP13.31□□□□□ -0.28
LETMD1-222ENST00000550274 DLG4P78352 724 aa13.31□□□□□ -0.28
LETMD1-222ENST00000550274 CLDN10P78369 228 aa13.31□□□□□ -0.28
LETMD1-222ENST00000550274 SEMA3BQ13214 749 aa13.31□□□□□ -0.28
LETMD1-222ENST00000550274 CUL4BQ13620 913 aa13.31□□□□□ -0.28
LETMD1-222ENST00000550274 BYSLQ13895 437 aaKnown RBP13.31□□□□□ -0.28
LETMD1-222ENST00000550274 KNOP1Q1ED39 458 aaKnown RBP13.31□□□□□ -0.28
LETMD1-222ENST00000550274 TRMT11Q7Z4G4 463 aaKnown RBP13.31□□□□□ -0.28
LETMD1-222ENST00000550274 PIP4P1Q86T03 277 aa13.31□□□□□ -0.28
LETMD1-222ENST00000550274 SLC2A14Q8TDB8 520 aa13.31□□□□□ -0.28
LETMD1-222ENST00000550274 TNIP3Q96KP6 325 aa13.31□□□□□ -0.28
LETMD1-222ENST00000550274 NACA2Q9H009 215 aa13.31□□□□□ -0.28
LETMD1-222ENST00000550274 CAPN10Q9HC96 672 aa13.31□□□□□ -0.28
LETMD1-222ENST00000550274 CSNK1G1Q9HCP0 422 aa13.31□□□□□ -0.28
LETMD1-222ENST00000550274 CD93Q9NPY3 652 aa13.31□□□□□ -0.28
LETMD1-222ENST00000550274 DNAJC17Q9NVM6 304 aaKnown RBP13.31□□□□□ -0.28
LETMD1-222ENST00000550274 CGNQ9P2M7 1197 aaKnown RBP13.31□□□□□ -0.28
LETMD1-222ENST00000550274 STARD13Q9Y3M8 1113 aa13.31□□□□□ -0.28
LETMD1-222ENST00000550274 NUMA1Q14980 2115 aa13.31□□□□□ -0.28
LETMD1-222ENST00000550274 FASNP49327 2511 aaKnown RBP13.31□□□□□ -0.28
LETMD1-222ENST00000550274 IGHV1OR15-9A0A0B4J2B8 117 aa13.3□□□□□ -0.28
LETMD1-222ENST00000550274 PRRT4C9JH25 899 aa13.3□□□□□ -0.28
LETMD1-222ENST00000550274 NEDD8-MDP1E9PL57 170 aa13.3□□□□□ -0.28
LETMD1-222ENST00000550274 CACNG3O60359 315 aa13.3□□□□□ -0.28
LETMD1-222ENST00000550274 NDUFV2P19404 249 aa13.3□□□□□ -0.28
LETMD1-222ENST00000550274 NTSR1P30989 418 aa13.3□□□□□ -0.28
LETMD1-222ENST00000550274 HOXD12P35452 270 aa13.3□□□□□ -0.28
LETMD1-222ENST00000550274 DPP6P42658 865 aa13.3□□□□□ -0.28
LETMD1-222ENST00000550274 AFMP43652 599 aa13.3□□□□□ -0.28
LETMD1-222ENST00000550274 MAP3K7CLP57077 242 aa13.3□□□□□ -0.28
LETMD1-222ENST00000550274 ZNF33AQ06730 810 aa13.3□□□□□ -0.28
LETMD1-222ENST00000550274 DUOXA1Q1HG43 343 aa13.3□□□□□ -0.28
LETMD1-222ENST00000550274 GRAMD4Q6IC98 578 aa13.3□□□□□ -0.28
LETMD1-222ENST00000550274 TOGARAM2Q6ZUX3 1019 aa13.3□□□□□ -0.28
LETMD1-222ENST00000550274 HTR3DQ70Z44 454 aa13.3□□□□□ -0.28
LETMD1-222ENST00000550274 GPRIN1Q7Z2K8 1008 aa13.3□□□□□ -0.28
LETMD1-222ENST00000550274 SLC41A1Q8IVJ1 513 aa13.3□□□□□ -0.28
LETMD1-222ENST00000550274 GRAMD1CQ8IYS0 662 aa13.3□□□□□ -0.28
LETMD1-222ENST00000550274 C12orf29Q8N999 325 aa13.3□□□□□ -0.28
LETMD1-222ENST00000550274 OR2I1PQ8NGU4 316 aa13.3□□□□□ -0.28
LETMD1-222ENST00000550274 ZNF396Q96N95 335 aaPredicted RBP13.3□□□□□ -0.28
LETMD1-222ENST00000550274 GTPBP2Q9BX10 602 aaKnown RBP13.3□□□□□ -0.28
LETMD1-222ENST00000550274 KLF16Q9BXK1 252 aaPredicted RBP13.3□□□□□ -0.28
LETMD1-222ENST00000550274 SLC32A1Q9H598 525 aa13.3□□□□□ -0.28
LETMD1-222ENST00000550274 MAGEF1Q9HAY2 307 aa13.3□□□□□ -0.28
LETMD1-222ENST00000550274 FAM49BQ9NUQ9 324 aa13.3□□□□□ -0.28
LETMD1-222ENST00000550274 COMMD8Q9NX08 183 aa13.3□□□□□ -0.28
LETMD1-222ENST00000550274 OSER1Q9NX31 292 aa13.3□□□□□ -0.28
LETMD1-222ENST00000550274 KLK13Q9UKR3 277 aa13.3□□□□□ -0.28
LETMD1-222ENST00000550274 SLC6A14Q9UN76 642 aa13.3□□□□□ -0.28
LETMD1-222ENST00000550274 ADAMTS20P59510 1910 aa13.29□□□□□ -0.28
LETMD1-222ENST00000550274 CELSR3Q9NYQ7 3312 aa13.29□□□□□ -0.28
LETMD1-222ENST00000550274 PVALEFA0A1B0GWK0 134 aa13.29□□□□□ -0.28
LETMD1-222ENST00000550274 TMEM8BA6NDV4 472 aa13.29□□□□□ -0.28
LETMD1-222ENST00000550274 UPK3BL1B0FP48 263 aa13.29□□□□□ -0.28
LETMD1-222ENST00000550274 UPK3BL2E5RIL1 263 aa13.29□□□□□ -0.28
LETMD1-222ENST00000550274 SERPINF2P08697 491 aa13.29□□□□□ -0.28
LETMD1-222ENST00000550274 TYRP14679 529 aa13.29□□□□□ -0.28
LETMD1-222ENST00000550274 NDST1P52848 882 aa13.29□□□□□ -0.28
LETMD1-222ENST00000550274 AP3M2P53677 418 aa13.29□□□□□ -0.28
LETMD1-222ENST00000550274 FAM193AP78312 1265 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms