RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 KLF16Q9BXK1 252 aaPredicted RBP23.63■■□□□ 1.37
BRF1-216ENST00000550208 CA14Q9ULX7 337 aa23.63■■□□□ 1.37
BRF1-216ENST00000550208 CEP83Q9Y592 693 aa23.63■■□□□ 1.37
BRF1-216ENST00000550208 TMEM221A6NGB7 291 aa23.62■■□□□ 1.37
BRF1-216ENST00000550208 M0R296 226 aa23.62■■□□□ 1.37
BRF1-216ENST00000550208 AP5Z1O43299 807 aa23.62■■□□□ 1.37
BRF1-216ENST00000550208 FERP16591 822 aa23.62■■□□□ 1.37
BRF1-216ENST00000550208 PLCB2Q00722 1185 aa23.62■■□□□ 1.37
BRF1-216ENST00000550208 SLC44A4Q53GD3 710 aa23.62■■□□□ 1.37
BRF1-216ENST00000550208 KLHDC10Q6PID8 442 aa23.62■■□□□ 1.37
BRF1-216ENST00000550208 CPLX3Q8WVH0 158 aa23.62■■□□□ 1.37
BRF1-216ENST00000550208 EDEM1Q92611 657 aa23.62■■□□□ 1.37
BRF1-216ENST00000550208 NOX5Q96PH1 765 aa23.62■■□□□ 1.37
BRF1-216ENST00000550208 PCDHB18PQ96TA0 734 aa23.62■■□□□ 1.37
BRF1-216ENST00000550208 LINC00597Q9H2U6 94 aa23.62■■□□□ 1.37
BRF1-216ENST00000550208 CFAP97Q9P2B7 532 aa23.62■■□□□ 1.37
BRF1-216ENST00000550208 DNMT3LQ9UJW3 386 aa23.62■■□□□ 1.37
BRF1-216ENST00000550208 CUL9Q8IWT3 2517 aa23.62■■□□□ 1.37
BRF1-216ENST00000550208 TECTAO75443 2155 aa23.61■■□□□ 1.37
BRF1-216ENST00000550208 FAM86C2PA6NEL3 165 aa23.61■■□□□ 1.37
BRF1-216ENST00000550208 ARNTLO00327 626 aa23.61■■□□□ 1.37
BRF1-216ENST00000550208 ERBB2P04626 1255 aa23.61■■□□□ 1.37
BRF1-216ENST00000550208 TPM3P06753 285 aa23.61■■□□□ 1.37
BRF1-216ENST00000550208 PFKPQ01813 784 aa23.61■■□□□ 1.37
BRF1-216ENST00000550208 EFEMP1Q12805 493 aa23.61■■□□□ 1.37
BRF1-216ENST00000550208 PTPN20Q4JDL3 420 aa23.61■■□□□ 1.37
BRF1-216ENST00000550208 TRIM68Q6AZZ1 485 aa23.61■■□□□ 1.37
BRF1-216ENST00000550208 CC2D1AQ6P1N0 951 aaPredicted RBP23.61■■□□□ 1.37
BRF1-216ENST00000550208 TADA2BQ86TJ2 420 aa23.61■■□□□ 1.37
BRF1-216ENST00000550208 CPA5Q8WXQ8 436 aa23.61■■□□□ 1.37
BRF1-216ENST00000550208 FAM83CQ9BQN1 747 aa23.61■■□□□ 1.37
BRF1-216ENST00000550208 C11orf16Q9NQ32 467 aa23.61■■□□□ 1.37
BRF1-216ENST00000550208 ABCC13Q9NSE7 274 aa23.61■■□□□ 1.37
BRF1-216ENST00000550208 RASAL2Q9UJF2 1139 aa23.61■■□□□ 1.37
BRF1-216ENST00000550208 KRBA1A5PL33 1030 aa23.6■■□□□ 1.37
BRF1-216ENST00000550208 SCAMP3O14828 347 aaKnown RBP23.6■■□□□ 1.37
BRF1-216ENST00000550208 LTFP02788 710 aa23.6■■□□□ 1.37
BRF1-216ENST00000550208 FYNP06241 537 aa23.6■■□□□ 1.37
BRF1-216ENST00000550208 CCDC172P0C7W6 258 aa23.6■■□□□ 1.37
BRF1-216ENST00000550208 IRF1P10914 325 aa23.6■■□□□ 1.37
BRF1-216ENST00000550208 TNK2Q07912 1038 aa23.6■■□□□ 1.37
BRF1-216ENST00000550208 SFMBT2Q5VUG0 894 aa23.6■■□□□ 1.37
BRF1-216ENST00000550208 NAA35Q5VZE5 725 aa23.6■■□□□ 1.37
BRF1-216ENST00000550208 RSRC2Q7L4I2 434 aaKnown RBP23.6■■□□□ 1.37
BRF1-216ENST00000550208 MIB1Q86YT6 1006 aa23.6■■□□□ 1.37
BRF1-216ENST00000550208 SIX5Q8N196 739 aa23.6■■□□□ 1.37
BRF1-216ENST00000550208 TTC8Q8TAM2 541 aa23.6■■□□□ 1.37
BRF1-216ENST00000550208 CDK5RAP1Q96SZ6 601 aaKnown RBP23.6■■□□□ 1.37
BRF1-216ENST00000550208 AGPAT1Q99943 283 aa23.6■■□□□ 1.37
BRF1-216ENST00000550208 TRPV5Q9NQA5 729 aa23.6■■□□□ 1.37
BRF1-216ENST00000550208 DUS2Q9NX74 493 aaKnown RBP23.6■■□□□ 1.37
BRF1-216ENST00000550208 AIPL1Q9NZN9 384 aa23.6■■□□□ 1.37
BRF1-216ENST00000550208 WNT6Q9Y6F9 365 aa23.6■■□□□ 1.37
BRF1-216ENST00000550208 A0A1W2PQJ5 194 aa23.59■■□□□ 1.37
BRF1-216ENST00000550208 LSM8O95777 96 aaKnown RBP23.59■■□□□ 1.37
BRF1-216ENST00000550208 PDGFBP01127 241 aaPredicted RBP23.59■■□□□ 1.37
BRF1-216ENST00000550208 CYP1A1P04798 512 aaPredicted RBP23.59■■□□□ 1.37
BRF1-216ENST00000550208 NOMO3P69849 1222 aa23.59■■□□□ 1.37
BRF1-216ENST00000550208 TAF5Q15542 800 aa23.59■■□□□ 1.37
BRF1-216ENST00000550208 ASIC2Q16515 512 aa23.59■■□□□ 1.37
BRF1-216ENST00000550208 E4F1Q66K89 784 aaPredicted RBP23.59■■□□□ 1.37
BRF1-216ENST00000550208 OR6B2Q6IFH4 312 aa23.59■■□□□ 1.37
BRF1-216ENST00000550208 ERICH1Q86X53 443 aa23.59■■□□□ 1.37
BRF1-216ENST00000550208 DDX42Q86XP3 938 aaKnown RBP eCLIP23.59■■□□□ 1.37
BRF1-216ENST00000550208 RNF139Q8WU17 664 aa23.59■■□□□ 1.37
BRF1-216ENST00000550208 OSCP1Q8WVF1 389 aa23.59■■□□□ 1.37
BRF1-216ENST00000550208 DNASE1L2Q92874 299 aa23.59■■□□□ 1.37
BRF1-216ENST00000550208 EBF3Q9H4W6 596 aa23.59■■□□□ 1.37
BRF1-216ENST00000550208 HEBP1Q9NRV9 189 aa23.59■■□□□ 1.37
BRF1-216ENST00000550208 GTSE1Q9NYZ3 720 aa23.59■■□□□ 1.37
BRF1-216ENST00000550208 SFMBT1Q9UHJ3 866 aa23.59■■□□□ 1.37
BRF1-216ENST00000550208 CAPN11Q9UMQ6 739 aa23.59■■□□□ 1.37
BRF1-216ENST00000550208 HELZP42694 1942 aaKnown RBP23.59■■□□□ 1.37
BRF1-216ENST00000550208 ARSAP15289 507 aa23.58■■□□□ 1.37
BRF1-216ENST00000550208 SNX16P57768 344 aa23.58■■□□□ 1.37
BRF1-216ENST00000550208 FAM183BPQ6ZVS7 135 aa23.58■■□□□ 1.37
BRF1-216ENST00000550208 CSGALNACT1Q8TDX6 532 aa23.58■■□□□ 1.37
BRF1-216ENST00000550208 GOLGA1Q92805 767 aa23.58■■□□□ 1.37
BRF1-216ENST00000550208 FAM149B1Q96BN6 582 aa23.58■■□□□ 1.37
BRF1-216ENST00000550208 PIWIL1Q96J94 861 aaKnown RBP23.58■■□□□ 1.37
BRF1-216ENST00000550208 SYNCQ9H7C4 482 aa23.58■■□□□ 1.37
BRF1-216ENST00000550208 HPS4Q9NQG7 708 aa23.58■■□□□ 1.37
BRF1-216ENST00000550208 ARHGEF3Q9NR81 526 aa23.58■■□□□ 1.37
BRF1-216ENST00000550208 MARCH2Q9P0N8 246 aa23.58■■□□□ 1.37
BRF1-216ENST00000550208 NAALADL1Q9UQQ1 740 aa23.58■■□□□ 1.37
BRF1-216ENST00000550208 SH3BP1Q9Y3L3 701 aa23.58■■□□□ 1.37
BRF1-216ENST00000550208 ITIH6Q6UXX5 1313 aa23.58■■□□□ 1.36
BRF1-216ENST00000550208 SLC12A8A0AV02 714 aa23.57■■□□□ 1.36
BRF1-216ENST00000550208 E2F8A0AVK6 867 aa23.57■■□□□ 1.36
BRF1-216ENST00000550208 SART1O43290 800 aaKnown RBP23.57■■□□□ 1.36
BRF1-216ENST00000550208 GPR37L1O60883 481 aa23.57■■□□□ 1.36
BRF1-216ENST00000550208 HMBSP08397 361 aa23.57■■□□□ 1.36
BRF1-216ENST00000550208 GABRB2P47870 512 aa23.57■■□□□ 1.36
BRF1-216ENST00000550208 IFNAR2P48551 515 aa23.57■■□□□ 1.36
BRF1-216ENST00000550208 PDGFRLQ15198 375 aa23.57■■□□□ 1.36
BRF1-216ENST00000550208 MLF2Q15773 248 aaPredicted RBP23.57■■□□□ 1.36
BRF1-216ENST00000550208 C2CD6Q53TS8 623 aa23.57■■□□□ 1.36
BRF1-216ENST00000550208 SARM1Q6SZW1 724 aa23.57■■□□□ 1.36
BRF1-216ENST00000550208 TRIM72Q6ZMU5 477 aa23.57■■□□□ 1.36
BRF1-216ENST00000550208 SLC30A5Q8TAD4 765 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms