RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 BTBD3Q9Y2F9 522 aa11.48□□□□□ -0.57
TRAFD1-206ENST00000549358 CEP192Q8TEP8 1941 aa11.48□□□□□ -0.57
TRAFD1-206ENST00000549358 MYH11P35749 1972 aa11.48□□□□□ -0.57
TRAFD1-206ENST00000549358 CYSRT1A8MQ03 144 aa11.47□□□□□ -0.57
TRAFD1-206ENST00000549358 NEDD8-MDP1E9PL57 170 aa11.47□□□□□ -0.57
TRAFD1-206ENST00000549358 FLRT2O43155 660 aa11.47□□□□□ -0.57
TRAFD1-206ENST00000549358 LDHAP00338 332 aaKnown RBP11.47□□□□□ -0.57
TRAFD1-206ENST00000549358 TMEM191BP0C7N4 346 aa11.47□□□□□ -0.57
TRAFD1-206ENST00000549358 IRF1P10914 325 aa11.47□□□□□ -0.57
TRAFD1-206ENST00000549358 WARSP23381 471 aaKnown RBP11.47□□□□□ -0.57
TRAFD1-206ENST00000549358 YWHAQP27348 245 aa11.47□□□□□ -0.57
TRAFD1-206ENST00000549358 GNL1P36915 607 aaPredicted RBP11.47□□□□□ -0.57
TRAFD1-206ENST00000549358 HECTD3Q5T447 861 aa11.47□□□□□ -0.57
TRAFD1-206ENST00000549358 DCAF12L1Q5VU92 463 aa11.47□□□□□ -0.57
TRAFD1-206ENST00000549358 MCTP1Q6DN14 999 aa11.47□□□□□ -0.57
TRAFD1-206ENST00000549358 LIMS2Q7Z4I7 341 aa11.47□□□□□ -0.57
TRAFD1-206ENST00000549358 SFR1Q86XK3 245 aa11.47□□□□□ -0.57
TRAFD1-206ENST00000549358 NUP93Q8N1F7 819 aa11.47□□□□□ -0.57
TRAFD1-206ENST00000549358 KRI1Q8N9T8 703 aaKnown RBP11.47□□□□□ -0.57
TRAFD1-206ENST00000549358 CADM4Q8NFZ8 388 aa11.47□□□□□ -0.57
TRAFD1-206ENST00000549358 RASSF8Q8NHQ8 419 aa11.47□□□□□ -0.57
TRAFD1-206ENST00000549358 WBP2Q969T9 261 aa11.47□□□□□ -0.57
TRAFD1-206ENST00000549358 AK8Q96MA6 479 aa11.47□□□□□ -0.57
TRAFD1-206ENST00000549358 XPO6Q96QU8 1125 aaKnown RBP11.47□□□□□ -0.57
TRAFD1-206ENST00000549358 NACA2Q9H009 215 aa11.47□□□□□ -0.57
TRAFD1-206ENST00000549358 ITM2CQ9NQX7 267 aa11.47□□□□□ -0.57
TRAFD1-206ENST00000549358 TMEM30AQ9NV96 361 aa11.47□□□□□ -0.57
TRAFD1-206ENST00000549358 RAI2Q9Y5P3 530 aa11.47□□□□□ -0.57
TRAFD1-206ENST00000549358 METTL12A8MUP2 240 aa11.46□□□□□ -0.57
TRAFD1-206ENST00000549358 KCNJ18B7U540 433 aa11.46□□□□□ -0.57
TRAFD1-206ENST00000549358 TNFSF14O43557 240 aa11.46□□□□□ -0.57
TRAFD1-206ENST00000549358 TYRP14679 529 aa11.46□□□□□ -0.57
TRAFD1-206ENST00000549358 SUZ12Q15022 739 aaKnown RBP11.46□□□□□ -0.57
TRAFD1-206ENST00000549358 SMAD1Q15797 465 aaKnown RBP11.46□□□□□ -0.57
TRAFD1-206ENST00000549358 FUT11Q495W5 492 aa11.46□□□□□ -0.57
TRAFD1-206ENST00000549358 ARL6IP4Q66PJ3 421 aaKnown RBP11.46□□□□□ -0.57
TRAFD1-206ENST00000549358 DHRS13Q6UX07 377 aa11.46□□□□□ -0.57
TRAFD1-206ENST00000549358 TPGS1Q6ZTW0 290 aa11.46□□□□□ -0.57
TRAFD1-206ENST00000549358 DYMQ7RTS9 669 aa11.46□□□□□ -0.57
TRAFD1-206ENST00000549358 METTL3Q86U44 580 aaKnown RBP11.46□□□□□ -0.57
TRAFD1-206ENST00000549358 ZNF843Q8N446 348 aa11.46□□□□□ -0.57
TRAFD1-206ENST00000549358 PDZD8Q8NEN9 1154 aa11.46□□□□□ -0.57
TRAFD1-206ENST00000549358 OR5B17Q8NGF7 314 aa11.46□□□□□ -0.57
TRAFD1-206ENST00000549358 FBXO32Q969P5 355 aa11.46□□□□□ -0.57
TRAFD1-206ENST00000549358 HVCN1Q96D96 273 aa11.46□□□□□ -0.57
TRAFD1-206ENST00000549358 ACCSQ96QU6 501 aa11.46□□□□□ -0.57
TRAFD1-206ENST00000549358 KCNK16Q96T55 309 aa11.46□□□□□ -0.57
TRAFD1-206ENST00000549358 MRPL45Q9BRJ2 306 aaKnown RBP11.46□□□□□ -0.57
TRAFD1-206ENST00000549358 BBS2Q9BXC9 721 aa11.46□□□□□ -0.57
TRAFD1-206ENST00000549358 ZNF518BQ9C0D4 1074 aa11.46□□□□□ -0.57
TRAFD1-206ENST00000549358 SNX25Q9H3E2 840 aa11.46□□□□□ -0.57
TRAFD1-206ENST00000549358 PCIF1Q9H4Z3 704 aa11.46□□□□□ -0.57
TRAFD1-206ENST00000549358 PRORYQ9H606 182 aa11.46□□□□□ -0.57
TRAFD1-206ENST00000549358 CCSER2Q9H7U1 834 aa11.46□□□□□ -0.57
TRAFD1-206ENST00000549358 MRPL44Q9H9J2 332 aaKnown RBP11.46□□□□□ -0.57
TRAFD1-206ENST00000549358 TBC1D7Q9P0N9 293 aa11.46□□□□□ -0.57
TRAFD1-206ENST00000549358 EIF2B4Q9UI10 523 aaKnown RBP11.46□□□□□ -0.57
TRAFD1-206ENST00000549358 EXOC7Q9UPT5 735 aa11.46□□□□□ -0.57
TRAFD1-206ENST00000549358 NFE2L3Q9Y4A8 694 aa11.46□□□□□ -0.57
TRAFD1-206ENST00000549358 NME7Q9Y5B8 376 aa11.46□□□□□ -0.57
TRAFD1-206ENST00000549358 PCDHGB2Q9Y5G2 931 aa11.46□□□□□ -0.57
TRAFD1-206ENST00000549358 PTPRBP23467 1997 aa11.46□□□□□ -0.58
TRAFD1-206ENST00000549358 PI4KAP42356 2102 aa11.45□□□□□ -0.58
TRAFD1-206ENST00000549358 FLNBO75369 2602 aaKnown RBP11.45□□□□□ -0.58
TRAFD1-206ENST00000549358 PTPRJQ12913 1337 aa11.45□□□□□ -0.58
TRAFD1-206ENST00000549358 A0A1B0GVT2 93 aa11.45□□□□□ -0.58
TRAFD1-206ENST00000549358 PLK4O00444 970 aa11.45□□□□□ -0.58
TRAFD1-206ENST00000549358 GFRA2O00451 464 aa11.45□□□□□ -0.58
TRAFD1-206ENST00000549358 CLDN5O00501 218 aa11.45□□□□□ -0.58
TRAFD1-206ENST00000549358 SLC26A4O43511 780 aa11.45□□□□□ -0.58
TRAFD1-206ENST00000549358 CACNG3O60359 315 aa11.45□□□□□ -0.58
TRAFD1-206ENST00000549358 PPP1R37O75864 691 aa11.45□□□□□ -0.58
TRAFD1-206ENST00000549358 HLA-EP13747 358 aa11.45□□□□□ -0.58
TRAFD1-206ENST00000549358 PTPN1P18031 435 aaKnown RBP11.45□□□□□ -0.58
TRAFD1-206ENST00000549358 DDIT3P35638 169 aa11.45□□□□□ -0.58
TRAFD1-206ENST00000549358 DGKGP49619 791 aa11.45□□□□□ -0.58
TRAFD1-206ENST00000549358 CSNK1EP49674 416 aaKnown RBP11.45□□□□□ -0.58
TRAFD1-206ENST00000549358 TPMTP51580 245 aa11.45□□□□□ -0.58
TRAFD1-206ENST00000549358 STARD3Q14849 445 aa11.45□□□□□ -0.58
TRAFD1-206ENST00000549358 LARP1BQ659C4 914 aaKnown RBP11.45□□□□□ -0.58
TRAFD1-206ENST00000549358 LRRC69Q6ZNQ3 347 aa11.45□□□□□ -0.58
TRAFD1-206ENST00000549358 SYCP3Q8IZU3 236 aa11.45□□□□□ -0.58
TRAFD1-206ENST00000549358 OR6B3Q8NGW1 331 aa11.45□□□□□ -0.58
TRAFD1-206ENST00000549358 SCAMP5Q8TAC9 235 aa11.45□□□□□ -0.58
TRAFD1-206ENST00000549358 OVCA2Q8WZ82 227 aa11.45□□□□□ -0.58
TRAFD1-206ENST00000549358 LARP4BQ92615 738 aaKnown RBP11.45□□□□□ -0.58
TRAFD1-206ENST00000549358 ANKRD36BP1Q96IX9 119 aa11.45□□□□□ -0.58
TRAFD1-206ENST00000549358 CBWD1Q9BRT8 395 aa11.45□□□□□ -0.58
TRAFD1-206ENST00000549358 STRA6Q9BX79 667 aa11.45□□□□□ -0.58
TRAFD1-206ENST00000549358 TRIM9Q9C026 710 aa11.45□□□□□ -0.58
TRAFD1-206ENST00000549358 ELOVL4Q9GZR5 314 aa11.45□□□□□ -0.58
TRAFD1-206ENST00000549358 MKRN2Q9H000 416 aaKnown RBP11.45□□□□□ -0.58
TRAFD1-206ENST00000549358 DPEP3Q9H4B8 488 aa11.45□□□□□ -0.58
TRAFD1-206ENST00000549358 INTS13Q9NVM9 706 aa11.45□□□□□ -0.58
TRAFD1-206ENST00000549358 USP36Q9P275 1121 aaKnown RBP11.45□□□□□ -0.58
TRAFD1-206ENST00000549358 WDR35Q9P2L0 1181 aa11.45□□□□□ -0.58
TRAFD1-206ENST00000549358 SNX11Q9Y5W9 270 aa11.45□□□□□ -0.58
TRAFD1-206ENST00000549358 STON1Q9Y6Q2 735 aa11.45□□□□□ -0.58
TRAFD1-206ENST00000549358 KALRNO60229 2985 aa11.45□□□□□ -0.58
TRAFD1-206ENST00000549358 KCNK3O14649 394 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms