RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 KLHL38Q2WGJ6 581 aa19.29■□□□□ 0.68
PRPF40B-208ENST00000548436 PPP6R3Q5H9R7 873 aaPredicted RBP19.29■□□□□ 0.68
PRPF40B-208ENST00000548436 MORN1Q5T089 497 aa19.29■□□□□ 0.68
PRPF40B-208ENST00000548436 UBXN11Q5T124 520 aa19.29■□□□□ 0.68
PRPF40B-208ENST00000548436 FAM47EQ6ZV65 393 aa19.29■□□□□ 0.68
PRPF40B-208ENST00000548436 AGGF1Q8N302 714 aaeCLIP19.29■□□□□ 0.68
PRPF40B-208ENST00000548436 MZB1Q8WU39 189 aa19.29■□□□□ 0.68
PRPF40B-208ENST00000548436 DCAKDQ8WVC6 231 aa19.29■□□□□ 0.68
PRPF40B-208ENST00000548436 SPOCK2Q92563 424 aa19.29■□□□□ 0.68
PRPF40B-208ENST00000548436 RTP4Q96DX8 246 aa19.29■□□□□ 0.68
PRPF40B-208ENST00000548436 RAB6BQ9NRW1 208 aa19.29■□□□□ 0.68
PRPF40B-208ENST00000548436 ARL2BPQ9Y2Y0 163 aa19.29■□□□□ 0.68
PRPF40B-208ENST00000548436 TEX264Q9Y6I9 313 aa19.29■□□□□ 0.68
PRPF40B-208ENST00000548436 CHADO15335 359 aa19.28■□□□□ 0.68
PRPF40B-208ENST00000548436 AVILO75366 819 aa19.28■□□□□ 0.68
PRPF40B-208ENST00000548436 UBOX5O94941 541 aa19.28■□□□□ 0.68
PRPF40B-208ENST00000548436 CD4P01730 458 aa19.28■□□□□ 0.68
PRPF40B-208ENST00000548436 ZNF865P0CJ78 1059 aaPredicted RBP19.28■□□□□ 0.68
PRPF40B-208ENST00000548436 LCP1P13796 627 aa19.28■□□□□ 0.68
PRPF40B-208ENST00000548436 AXLP30530 894 aa19.28■□□□□ 0.68
PRPF40B-208ENST00000548436 PTPN9P43378 593 aa19.28■□□□□ 0.68
PRPF40B-208ENST00000548436 SNX16P57768 344 aa19.28■□□□□ 0.68
PRPF40B-208ENST00000548436 FKBP1BP68106 108 aa19.28■□□□□ 0.68
PRPF40B-208ENST00000548436 ZNF670Q9BS34 389 aa19.28■□□□□ 0.68
PRPF40B-208ENST00000548436 PITPNM3Q9BZ71 974 aa19.28■□□□□ 0.68
PRPF40B-208ENST00000548436 PAK5Q9P286 719 aa19.28■□□□□ 0.68
PRPF40B-208ENST00000548436 TSHRP16473 764 aa19.28■□□□□ 0.68
PRPF40B-208ENST00000548436 L1CAMP32004 1257 aa19.28■□□□□ 0.68
PRPF40B-208ENST00000548436 RPL34P49207 117 aaKnown RBP19.28■□□□□ 0.68
PRPF40B-208ENST00000548436 PSEN2P49810 448 aa19.28■□□□□ 0.68
PRPF40B-208ENST00000548436 BCAT1P54687 386 aa19.28■□□□□ 0.68
PRPF40B-208ENST00000548436 DNAJC3Q13217 504 aa19.28■□□□□ 0.68
PRPF40B-208ENST00000548436 SLC26A9Q7LBE3 791 aa19.28■□□□□ 0.68
PRPF40B-208ENST00000548436 VSIG1Q86XK7 387 aa19.28■□□□□ 0.68
PRPF40B-208ENST00000548436 FUKQ8N0W3 1084 aa19.28■□□□□ 0.68
PRPF40B-208ENST00000548436 CENPIQ92674 756 aaPredicted RBP19.28■□□□□ 0.68
PRPF40B-208ENST00000548436 NRDE2Q9H7Z3 1164 aa19.28■□□□□ 0.68
PRPF40B-208ENST00000548436 KLC4Q9NSK0 619 aa19.28■□□□□ 0.68
PRPF40B-208ENST00000548436 GDAP2Q9NXN4 497 aa19.28■□□□□ 0.68
PRPF40B-208ENST00000548436 BCLAF3A2AJT9 711 aaKnown RBP19.27■□□□□ 0.68
PRPF40B-208ENST00000548436 KBTBD13C9JR72 458 aa19.27■□□□□ 0.68
PRPF40B-208ENST00000548436 HAS3O00219 553 aa19.27■□□□□ 0.68
PRPF40B-208ENST00000548436 CYP2F1P24903 491 aa19.27■□□□□ 0.68
PRPF40B-208ENST00000548436 MSH2P43246 934 aa19.27■□□□□ 0.68
PRPF40B-208ENST00000548436 MGAT5Q09328 741 aa19.27■□□□□ 0.68
PRPF40B-208ENST00000548436 MAP2K5Q13163 448 aa19.27■□□□□ 0.68
PRPF40B-208ENST00000548436 GALNTL6Q49A17 601 aa19.27■□□□□ 0.68
PRPF40B-208ENST00000548436 XKR4Q5GH76 650 aa19.27■□□□□ 0.68
PRPF40B-208ENST00000548436 FAXCQ5TGI0 409 aa19.27■□□□□ 0.68
PRPF40B-208ENST00000548436 SLC2A14Q8TDB8 520 aa19.27■□□□□ 0.68
PRPF40B-208ENST00000548436 RMDN2Q96LZ7 410 aa19.27■□□□□ 0.68
PRPF40B-208ENST00000548436 TCRBV9S1A1TA0A576 114 aa19.26■□□□□ 0.67
PRPF40B-208ENST00000548436 ZBED1O96006 694 aa19.26■□□□□ 0.67
PRPF40B-208ENST00000548436 KCNE1P15382 129 aa19.26■□□□□ 0.67
PRPF40B-208ENST00000548436 DPYSL2Q16555 572 aa19.26■□□□□ 0.67
PRPF40B-208ENST00000548436 CCL14Q16627 93 aa19.26■□□□□ 0.67
PRPF40B-208ENST00000548436 PDK4Q16654 411 aa19.26■□□□□ 0.67
PRPF40B-208ENST00000548436 ARRDC4Q8NCT1 418 aa19.26■□□□□ 0.67
PRPF40B-208ENST00000548436 SNX25Q9H3E2 840 aa19.26■□□□□ 0.67
PRPF40B-208ENST00000548436 DHX35Q9H5Z1 703 aaKnown RBP19.26■□□□□ 0.67
PRPF40B-208ENST00000548436 SSU72Q9NP77 194 aaKnown RBP19.26■□□□□ 0.67
PRPF40B-208ENST00000548436 MTMR10Q9NXD2 777 aa19.26■□□□□ 0.67
PRPF40B-208ENST00000548436 CELF2O95319 508 aaKnown RBP19.26■□□□□ 0.67
PRPF40B-208ENST00000548436 ATP2A2P16615 1042 aaKnown RBP19.26■□□□□ 0.67
PRPF40B-208ENST00000548436 DESP17661 470 aa19.26■□□□□ 0.67
PRPF40B-208ENST00000548436 BEX3Q00994 111 aa19.26■□□□□ 0.67
PRPF40B-208ENST00000548436 SLC10A2Q12908 348 aaPredicted RBP19.26■□□□□ 0.67
PRPF40B-208ENST00000548436 RGS9BPQ6ZS82 235 aa19.26■□□□□ 0.67
PRPF40B-208ENST00000548436 LIMS2Q7Z4I7 341 aa19.26■□□□□ 0.67
PRPF40B-208ENST00000548436 C2orf69Q8N8R5 385 aa19.26■□□□□ 0.67
PRPF40B-208ENST00000548436 APPL2Q8NEU8 664 aa19.26■□□□□ 0.67
PRPF40B-208ENST00000548436 GRAMD1AQ96CP6 724 aa19.26■□□□□ 0.67
PRPF40B-208ENST00000548436 ZNF560Q96MR9 790 aa19.26■□□□□ 0.67
PRPF40B-208ENST00000548436 NCAPGQ9BPX3 1015 aa19.26■□□□□ 0.67
PRPF40B-208ENST00000548436 SLCO1B3Q9NPD5 702 aa19.26■□□□□ 0.67
PRPF40B-208ENST00000548436 CFAP69A5D8W1 941 aa19.25■□□□□ 0.67
PRPF40B-208ENST00000548436 ZNF487B1APH4 448 aa19.25■□□□□ 0.67
PRPF40B-208ENST00000548436 MYL3P08590 195 aa19.25■□□□□ 0.67
PRPF40B-208ENST00000548436 TKTP29401 623 aaKnown RBP19.25■□□□□ 0.67
PRPF40B-208ENST00000548436 TAF6P49848 677 aa19.25■□□□□ 0.67
PRPF40B-208ENST00000548436 GBE1Q04446 702 aa19.25■□□□□ 0.67
PRPF40B-208ENST00000548436 LVRNQ6Q4G3 990 aa19.25■□□□□ 0.67
PRPF40B-208ENST00000548436 FITM2Q8N6M3 262 aa19.25■□□□□ 0.67
PRPF40B-208ENST00000548436 CCDC185Q8N715 623 aa19.25■□□□□ 0.67
PRPF40B-208ENST00000548436 SMG8Q8ND04 991 aaKnown RBP19.25■□□□□ 0.67
PRPF40B-208ENST00000548436 CCDC110Q8TBZ0 833 aa19.25■□□□□ 0.67
PRPF40B-208ENST00000548436 CYTH2Q99418 400 aa19.25■□□□□ 0.67
PRPF40B-208ENST00000548436 ETNK2Q9NVF9 386 aa19.25■□□□□ 0.67
PRPF40B-208ENST00000548436 PHTF1Q9UMS5 762 aa19.25■□□□□ 0.67
PRPF40B-208ENST00000548436 AP4E1Q9UPM8 1137 aa19.25■□□□□ 0.67
PRPF40B-208ENST00000548436 IPPQ9Y573 584 aa19.25■□□□□ 0.67
PRPF40B-208ENST00000548436 GOLGA8RI6L899 631 aa19.24■□□□□ 0.67
PRPF40B-208ENST00000548436 SCNN1AP37088 669 aa19.24■□□□□ 0.67
PRPF40B-208ENST00000548436 YWHAZP63104 245 aaKnown RBP19.24■□□□□ 0.67
PRPF40B-208ENST00000548436 CBLBQ13191 982 aa19.24■□□□□ 0.67
PRPF40B-208ENST00000548436 KBTBD12Q3ZCT8 623 aa19.24■□□□□ 0.67
PRPF40B-208ENST00000548436 CYB5D1Q6P9G0 228 aa19.24■□□□□ 0.67
PRPF40B-208ENST00000548436 ARCQ7LC44 396 aa19.24■□□□□ 0.67
PRPF40B-208ENST00000548436 OSTM1Q86WC4 334 aa19.24■□□□□ 0.67
PRPF40B-208ENST00000548436 SUGP1Q8IWZ8 645 aaKnown RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms