RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 ELMOD1Q8N336 334 aa30.1■■■□□ 2.41
BRF1-213ENST00000548421 OVCA2Q8WZ82 227 aa30.1■■■□□ 2.41
BRF1-213ENST00000548421 CFAP57Q96MR6 1250 aa30.1■■■□□ 2.41
BRF1-213ENST00000548421 TLR8Q9NR97 1041 aaKnown RBP30.1■■■□□ 2.41
BRF1-213ENST00000548421 UXTQ9UBK9 157 aaPredicted RBP30.1■■■□□ 2.41
BRF1-213ENST00000548421 ZMYND10O75800 440 aa30.09■■■□□ 2.41
BRF1-213ENST00000548421 FTCDO95954 541 aa30.09■■■□□ 2.41
BRF1-213ENST00000548421 NCAM1P13591 858 aa30.09■■■□□ 2.41
BRF1-213ENST00000548421 PTPN9P43378 593 aa30.09■■■□□ 2.41
BRF1-213ENST00000548421 ACAP1Q15027 740 aa30.09■■■□□ 2.41
BRF1-213ENST00000548421 CCDC14Q49A88 953 aa30.09■■■□□ 2.41
BRF1-213ENST00000548421 BTBD8Q5XKL5 378 aa30.09■■■□□ 2.41
BRF1-213ENST00000548421 SYT10Q6XYQ8 523 aa30.09■■■□□ 2.41
BRF1-213ENST00000548421 PEX26Q7Z412 305 aa30.09■■■□□ 2.41
BRF1-213ENST00000548421 PDZD8Q8NEN9 1154 aa30.09■■■□□ 2.41
BRF1-213ENST00000548421 NMUR1Q9HB89 426 aa30.09■■■□□ 2.41
BRF1-213ENST00000548421 DNAI1Q9UI46 699 aa30.09■■■□□ 2.41
BRF1-213ENST00000548421 STAP1Q9ULZ2 295 aa30.09■■■□□ 2.41
BRF1-213ENST00000548421 NAALADL1Q9UQQ1 740 aa30.09■■■□□ 2.41
BRF1-213ENST00000548421 JRKLQ9Y4A0 524 aa30.09■■■□□ 2.41
BRF1-213ENST00000548421 COMTP21964 271 aa30.08■■■□□ 2.41
BRF1-213ENST00000548421 HOXA9P31269 272 aa30.08■■■□□ 2.41
BRF1-213ENST00000548421 NT5DC3Q86UY8 548 aa30.08■■■□□ 2.41
BRF1-213ENST00000548421 EDEM1Q92611 657 aa30.08■■■□□ 2.41
BRF1-213ENST00000548421 ZNF512Q96ME7 567 aaPredicted RBP30.08■■■□□ 2.41
BRF1-213ENST00000548421 NSUN3Q9H649 340 aaKnown RBP30.08■■■□□ 2.41
BRF1-213ENST00000548421 AMFRQ9UKV5 643 aa30.08■■■□□ 2.41
BRF1-213ENST00000548421 HYOU1Q9Y4L1 999 aa30.08■■■□□ 2.41
BRF1-213ENST00000548421 SPOPO43791 374 aa30.07■■■□□ 2.4
BRF1-213ENST00000548421 PGFP49763 221 aa30.07■■■□□ 2.4
BRF1-213ENST00000548421 SLC25A52Q3SY17 297 aa30.07■■■□□ 2.4
BRF1-213ENST00000548421 SYPL2Q5VXT5 272 aa30.07■■■□□ 2.4
BRF1-213ENST00000548421 RRN3Q9NYV6 651 aa30.07■■■□□ 2.4
BRF1-213ENST00000548421 CLIC5Q9NZA1 410 aa30.07■■■□□ 2.4
BRF1-213ENST00000548421 HNRNPA1P09651 372 aaKnown RBP eCLIP30.06■■■□□ 2.4
BRF1-213ENST00000548421 ZDHHC11BP0C7U3 371 aa30.06■■■□□ 2.4
BRF1-213ENST00000548421 C15orf59Q2T9L4 293 aaPredicted RBP30.06■■■□□ 2.4
BRF1-213ENST00000548421 UBE2Q2Q8WVN8 375 aa30.06■■■□□ 2.4
BRF1-213ENST00000548421 NT5C3BQ969T7 300 aa30.06■■■□□ 2.4
BRF1-213ENST00000548421 TTYH1Q9H313 450 aaPredicted RBP30.06■■■□□ 2.4
BRF1-213ENST00000548421 ZDHHC7Q9NXF8 308 aa30.06■■■□□ 2.4
BRF1-213ENST00000548421 LMCD1Q9NZU5 365 aa30.06■■■□□ 2.4
BRF1-213ENST00000548421 USTQ9Y2C2 406 aa30.06■■■□□ 2.4
BRF1-213ENST00000548421 OBSL1O75147 1896 aa30.06■■■□□ 2.4
BRF1-213ENST00000548421 CCL16O15467 120 aa30.06■■■□□ 2.4
BRF1-213ENST00000548421 RFPL2O75678 378 aa30.06■■■□□ 2.4
BRF1-213ENST00000548421 RNF8O76064 485 aa30.06■■■□□ 2.4
BRF1-213ENST00000548421 CASQ1P31415 396 aa30.06■■■□□ 2.4
BRF1-213ENST00000548421 SULT1E1P49888 294 aa30.06■■■□□ 2.4
BRF1-213ENST00000548421 ATP11AP98196 1134 aa30.06■■■□□ 2.4
BRF1-213ENST00000548421 CDO1Q16878 200 aa30.06■■■□□ 2.4
BRF1-213ENST00000548421 MEI1Q5TIA1 1274 aa30.06■■■□□ 2.4
BRF1-213ENST00000548421 CPNE8Q86YQ8 564 aa30.06■■■□□ 2.4
BRF1-213ENST00000548421 NPY6RQ99463 290 aa30.06■■■□□ 2.4
BRF1-213ENST00000548421 NAPGQ99747 312 aaPredicted RBP30.06■■■□□ 2.4
BRF1-213ENST00000548421 PRDM12Q9H4Q4 367 aa30.06■■■□□ 2.4
BRF1-213ENST00000548421 OSER1Q9NX31 292 aa30.06■■■□□ 2.4
BRF1-213ENST00000548421 CTAGE9A4FU28 777 aa30.05■■■□□ 2.4
BRF1-213ENST00000548421 SPDYE4A6NLX3 237 aa30.05■■■□□ 2.4
BRF1-213ENST00000548421 PPP3CCP48454 512 aa30.05■■■□□ 2.4
BRF1-213ENST00000548421 SNX30Q5VWJ9 437 aa30.05■■■□□ 2.4
BRF1-213ENST00000548421 DAB2IPQ5VWQ8 1189 aa30.05■■■□□ 2.4
BRF1-213ENST00000548421 FAM172AQ8WUF8 416 aa30.05■■■□□ 2.4
BRF1-213ENST00000548421 CENPIQ92674 756 aaPredicted RBP30.05■■■□□ 2.4
BRF1-213ENST00000548421 NCAPGQ9BPX3 1015 aa30.05■■■□□ 2.4
BRF1-213ENST00000548421 ANAPC1Q9H1A4 1944 aa30.04■■■□□ 2.4
BRF1-213ENST00000548421 ENC1O14682 589 aa30.04■■■□□ 2.4
BRF1-213ENST00000548421 FANCGO15287 622 aa30.04■■■□□ 2.4
BRF1-213ENST00000548421 LRCH4O75427 683 aa30.04■■■□□ 2.4
BRF1-213ENST00000548421 RALAP11233 206 aa30.04■■■□□ 2.4
BRF1-213ENST00000548421 KCNC3Q14003 757 aa30.04■■■□□ 2.4
BRF1-213ENST00000548421 CC2D1AQ6P1N0 951 aaPredicted RBP30.04■■■□□ 2.4
BRF1-213ENST00000548421 STRADAQ7RTN6 431 aa30.04■■■□□ 2.4
BRF1-213ENST00000548421 RNF139Q8WU17 664 aa30.04■■■□□ 2.4
BRF1-213ENST00000548421 TBCBQ99426 244 aa30.04■■■□□ 2.4
BRF1-213ENST00000548421 MTPAPQ9NVV4 582 aaKnown RBP eCLIP30.04■■■□□ 2.4
BRF1-213ENST00000548421 TRPM5Q9NZQ8 1165 aa30.04■■■□□ 2.4
BRF1-213ENST00000548421 PACSIN2Q9UNF0 486 aaPredicted RBP30.04■■■□□ 2.4
BRF1-213ENST00000548421 DENND4CQ5VZ89 1909 aa30.03■■■□□ 2.4
BRF1-213ENST00000548421 POU2F2P09086 479 aa30.03■■■□□ 2.4
BRF1-213ENST00000548421 RARGP13631 454 aa30.03■■■□□ 2.4
BRF1-213ENST00000548421 TFE3P19532 575 aaPredicted RBP30.03■■■□□ 2.4
BRF1-213ENST00000548421 SH3PXD2AQ5TCZ1 1133 aa30.03■■■□□ 2.4
BRF1-213ENST00000548421 CD101Q93033 1021 aa30.03■■■□□ 2.4
BRF1-213ENST00000548421 ZNF334Q9HCZ1 680 aaPredicted RBP30.03■■■□□ 2.4
BRF1-213ENST00000548421 ZNF840PA6NDX5 716 aa30.02■■■□□ 2.4
BRF1-213ENST00000548421 MIF4GDA9UHW6 222 aaKnown RBP30.02■■■□□ 2.4
BRF1-213ENST00000548421 M0QYT0 321 aa30.02■■■□□ 2.4
BRF1-213ENST00000548421 NCK2O43639 380 aa30.02■■■□□ 2.4
BRF1-213ENST00000548421 XYLBO75191 536 aa30.02■■■□□ 2.4
BRF1-213ENST00000548421 ATP1A1P05023 1023 aaKnown RBP30.02■■■□□ 2.4
BRF1-213ENST00000548421 GTF2F1P35269 517 aaKnown RBP eCLIP30.02■■■□□ 2.4
BRF1-213ENST00000548421 PCK1P35558 622 aa30.02■■■□□ 2.4
BRF1-213ENST00000548421 SSR1P43307 286 aaKnown RBP30.02■■■□□ 2.4
BRF1-213ENST00000548421 TCEAL5Q5H9L2 206 aa30.02■■■□□ 2.4
BRF1-213ENST00000548421 OTUD1Q5VV17 481 aaPredicted RBP30.02■■■□□ 2.4
BRF1-213ENST00000548421 RSRC2Q7L4I2 434 aaKnown RBP30.02■■■□□ 2.4
BRF1-213ENST00000548421 BNIPLQ7Z465 357 aa30.02■■■□□ 2.4
BRF1-213ENST00000548421 TMC8Q8IU68 726 aa30.02■■■□□ 2.4
BRF1-213ENST00000548421 ARFGAP1Q8N6T3 406 aa30.02■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms