RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 CHSY1Q86X52 802 aa3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 ADHFE1Q8IWW8 467 aa3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 GALNT4Q8N4A0 578 aa3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 DEFB123Q8N688 67 aa3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 NRACQ8N912 160 aa3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 PSD4Q8NDX1 1056 aa3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 NSUN7Q8NE18 718 aaKnown RBP3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 OR2I1PQ8NGU4 316 aa3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 ATL2Q8NHH9 583 aa3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 RP9Q8TA86 221 aaKnown RBP3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 AHCYL2Q96HN2 611 aaKnown RBP3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 LRIG1Q96JA1 1093 aa3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 FSD1LQ9BXM9 530 aa3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 DLL3Q9NYJ7 618 aa3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 CFAP97Q9P2B7 532 aa3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 DKK3Q9UBP4 350 aa3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 HACL1Q9UJ83 578 aa3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 ATP8A1Q9Y2Q0 1164 aa3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 ANKRD31Q8N7Z5 1873 aa3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 SLX4Q8IY92 1834 aa3.04□□□□□ -1.92
DEPDC4-204ENST00000547823 INSRP06213 1382 aa3.03□□□□□ -1.92
DEPDC4-204ENST00000547823 ARFGEF2Q9Y6D5 1785 aa3.03□□□□□ -1.92
DEPDC4-204ENST00000547823 TTC21AQ8NDW8 1320 aa3.03□□□□□ -1.92
DEPDC4-204ENST00000547823 MON2Q7Z3U7 1717 aa3.03□□□□□ -1.92
DEPDC4-204ENST00000547823 LY6G6EA0A0G2JKS1 128 aa3.03□□□□□ -1.92
DEPDC4-204ENST00000547823 PRSS44E7EML9 344 aa3.03□□□□□ -1.92
DEPDC4-204ENST00000547823 DSCR3O14972 297 aa3.03□□□□□ -1.92
DEPDC4-204ENST00000547823 TGFB3P10600 412 aa3.03□□□□□ -1.92
DEPDC4-204ENST00000547823 IL1R2P27930 398 aa3.03□□□□□ -1.92
DEPDC4-204ENST00000547823 CYP2C18P33260 490 aa3.03□□□□□ -1.92
DEPDC4-204ENST00000547823 CYP2C19P33261 490 aa3.03□□□□□ -1.92
DEPDC4-204ENST00000547823 RFC4P35249 363 aa3.03□□□□□ -1.92
DEPDC4-204ENST00000547823 SLC16A1P53985 500 aa3.03□□□□□ -1.92
DEPDC4-204ENST00000547823 AMPD3Q01432 767 aa3.03□□□□□ -1.92
DEPDC4-204ENST00000547823 SRSF1Q07955 248 aaKnown RBP eCLIP3.03□□□□□ -1.92
DEPDC4-204ENST00000547823 TARDBPQ13148 414 aaKnown RBP eCLIP3.03□□□□□ -1.92
DEPDC4-204ENST00000547823 ZNF813Q6ZN06 617 aa3.03□□□□□ -1.92
DEPDC4-204ENST00000547823 IRF2BP2Q7Z5L9 587 aa3.03□□□□□ -1.92
DEPDC4-204ENST00000547823 ACRBPQ8NEB7 543 aa3.03□□□□□ -1.92
DEPDC4-204ENST00000547823 PIGBQ92521 554 aa3.03□□□□□ -1.92
DEPDC4-204ENST00000547823 THOC3Q96J01 351 aaKnown RBP3.03□□□□□ -1.92
DEPDC4-204ENST00000547823 PDGFCQ9NRA1 345 aa3.03□□□□□ -1.92
DEPDC4-204ENST00000547823 ZNF277Q9NRM2 450 aaPredicted RBP3.03□□□□□ -1.92
DEPDC4-204ENST00000547823 DUSP22Q9NRW4 184 aa3.03□□□□□ -1.92
DEPDC4-204ENST00000547823 SAGE1Q9NXZ1 904 aa3.03□□□□□ -1.92
DEPDC4-204ENST00000547823 ETAA1Q9NY74 926 aa3.03□□□□□ -1.92
DEPDC4-204ENST00000547823 PI4KBQ9UBF8 816 aa3.03□□□□□ -1.92
DEPDC4-204ENST00000547823 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.03□□□□□ -1.92
DEPDC4-204ENST00000547823 MCM8Q9UJA3 840 aa3.03□□□□□ -1.92
DEPDC4-204ENST00000547823 INTUQ9ULD6 942 aa3.03□□□□□ -1.92
DEPDC4-204ENST00000547823 CENPFP49454 3210 aa3.03□□□□□ -1.92
DEPDC4-204ENST00000547823 SMG6Q86US8 1419 aaKnown RBP3.02□□□□□ -1.93
DEPDC4-204ENST00000547823 CGNL1Q0VF96 1302 aa3.02□□□□□ -1.93
DEPDC4-204ENST00000547823 WASHC2AQ641Q2 1341 aa3.02□□□□□ -1.93
DEPDC4-204ENST00000547823 ZNF541Q9H0D2 1346 aa3.02□□□□□ -1.93
DEPDC4-204ENST00000547823 CD8B2A6NJW9 211 aa3.02□□□□□ -1.93
DEPDC4-204ENST00000547823 E9PLN8 166 aa3.02□□□□□ -1.93
DEPDC4-204ENST00000547823 TJP3O95049 919 aa3.02□□□□□ -1.93
DEPDC4-204ENST00000547823 ALPLP05186 524 aa3.02□□□□□ -1.93
DEPDC4-204ENST00000547823 SBK3P0C264 359 aa3.02□□□□□ -1.93
DEPDC4-204ENST00000547823 OSMP13725 252 aa3.02□□□□□ -1.93
DEPDC4-204ENST00000547823 AGXTP21549 392 aa3.02□□□□□ -1.93
DEPDC4-204ENST00000547823 ATP5F1P24539 256 aaPredicted RBP3.02□□□□□ -1.93
DEPDC4-204ENST00000547823 TM4SF1P30408 202 aa3.02□□□□□ -1.93
DEPDC4-204ENST00000547823 KCNJ5P48544 419 aa3.02□□□□□ -1.93
DEPDC4-204ENST00000547823 CDKN1CP49918 316 aaPredicted RBP3.02□□□□□ -1.93
DEPDC4-204ENST00000547823 TCF15Q12870 199 aa3.02□□□□□ -1.93
DEPDC4-204ENST00000547823 NOGQ13253 232 aa3.02□□□□□ -1.93
DEPDC4-204ENST00000547823 KLF1Q13351 362 aaPredicted RBP3.02□□□□□ -1.93
DEPDC4-204ENST00000547823 RBMS2Q15434 407 aaKnown RBP3.02□□□□□ -1.93
DEPDC4-204ENST00000547823 TBC1D25Q3MII6 688 aa3.02□□□□□ -1.93
DEPDC4-204ENST00000547823 FLYWCH1Q4VC44 716 aa3.02□□□□□ -1.93
DEPDC4-204ENST00000547823 Q6ZTC4 211 aa3.02□□□□□ -1.93
DEPDC4-204ENST00000547823 MAVSQ7Z434 540 aa3.02□□□□□ -1.93
DEPDC4-204ENST00000547823 NECAB2Q7Z6G3 386 aa3.02□□□□□ -1.93
DEPDC4-204ENST00000547823 C2CD5Q86YS7 1000 aa3.02□□□□□ -1.93
DEPDC4-204ENST00000547823 AMOTL1Q8IY63 956 aa3.02□□□□□ -1.93
DEPDC4-204ENST00000547823 CBARPQ8N350 705 aaPredicted RBP3.02□□□□□ -1.93
DEPDC4-204ENST00000547823 CNTD1Q8N815 330 aa3.02□□□□□ -1.93
DEPDC4-204ENST00000547823 CYP2W1Q8TAV3 490 aa3.02□□□□□ -1.93
DEPDC4-204ENST00000547823 LTV1Q96GA3 475 aaPredicted RBP3.02□□□□□ -1.93
DEPDC4-204ENST00000547823 VKORC1Q9BQB6 163 aa3.02□□□□□ -1.93
DEPDC4-204ENST00000547823 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
DEPDC4-204ENST00000547823 TAOK3Q9H2K8 898 aa3.02□□□□□ -1.93
DEPDC4-204ENST00000547823 TXLNGQ9NUQ3 528 aa3.02□□□□□ -1.93
DEPDC4-204ENST00000547823 POT1Q9NUX5 634 aa3.02□□□□□ -1.93
DEPDC4-204ENST00000547823 RNF186Q9NXI6 227 aa3.02□□□□□ -1.93
DEPDC4-204ENST00000547823 SLC5A4Q9NY91 659 aa3.02□□□□□ -1.93
DEPDC4-204ENST00000547823 SRP68Q9UHB9 627 aaKnown RBP3.02□□□□□ -1.93
DEPDC4-204ENST00000547823 ADAMTS5Q9UNA0 930 aa3.02□□□□□ -1.93
DEPDC4-204ENST00000547823 RAD54BQ9Y620 910 aa3.02□□□□□ -1.93
DEPDC4-204ENST00000547823 CD163L1Q9NR16 1453 aa3.02□□□□□ -1.93
DEPDC4-204ENST00000547823 HTTP42858 3142 aa3.02□□□□□ -1.93
DEPDC4-204ENST00000547823 KDRP35968 1356 aa3.01□□□□□ -1.93
DEPDC4-204ENST00000547823 RNF123Q5XPI4 1314 aa3.01□□□□□ -1.93
DEPDC4-204ENST00000547823 PCDH11XQ9BZA7 1347 aa3.01□□□□□ -1.93
DEPDC4-204ENST00000547823 PCDH11YQ9BZA8 1340 aa3.01□□□□□ -1.93
DEPDC4-204ENST00000547823 USP42Q9H9J4 1324 aaKnown RBP3.01□□□□□ -1.93
DEPDC4-204ENST00000547823 H0YIN7 160 aa3.01□□□□□ -1.93
DEPDC4-204ENST00000547823 CELF2O95319 508 aaKnown RBP3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms