RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 LRRC32Q14392 662 aa12.42□□□□□ -0.42
RAB5C-204ENST00000547517 KLHL40Q2TBA0 621 aa12.42□□□□□ -0.42
RAB5C-204ENST00000547517 NAIF1Q69YI7 327 aaPredicted RBP12.42□□□□□ -0.42
RAB5C-204ENST00000547517 PMF1Q6P1K2 205 aa12.42□□□□□ -0.42
RAB5C-204ENST00000547517 DENND1BQ6P3S1 775 aa12.42□□□□□ -0.42
RAB5C-204ENST00000547517 RSRC2Q7L4I2 434 aaKnown RBP12.42□□□□□ -0.42
RAB5C-204ENST00000547517 BHLHA9Q7RTU4 235 aa12.42□□□□□ -0.42
RAB5C-204ENST00000547517 MIB1Q86YT6 1006 aa12.42□□□□□ -0.42
RAB5C-204ENST00000547517 ANKRD20A12PQ8NF67 263 aa12.42□□□□□ -0.42
RAB5C-204ENST00000547517 SLC35F5Q8WV83 523 aa12.42□□□□□ -0.42
RAB5C-204ENST00000547517 KCTD13Q8WZ19 329 aa12.42□□□□□ -0.42
RAB5C-204ENST00000547517 WBP2Q969T9 261 aa12.42□□□□□ -0.42
RAB5C-204ENST00000547517 CLDN23Q96B33 292 aa12.42□□□□□ -0.42
RAB5C-204ENST00000547517 NAT10Q9H0A0 1025 aaKnown RBP12.42□□□□□ -0.42
RAB5C-204ENST00000547517 LMAN1LQ9HAT1 526 aa12.42□□□□□ -0.42
RAB5C-204ENST00000547517 CLIC5Q9NZA1 410 aa12.42□□□□□ -0.42
RAB5C-204ENST00000547517 DNMT3LQ9UJW3 386 aa12.42□□□□□ -0.42
RAB5C-204ENST00000547517 FHOD1Q9Y613 1164 aa12.42□□□□□ -0.42
RAB5C-204ENST00000547517 F5P12259 2224 aa12.41□□□□□ -0.42
RAB5C-204ENST00000547517 E2F8A0AVK6 867 aa12.41□□□□□ -0.42
RAB5C-204ENST00000547517 CYP17A1P05093 508 aa12.41□□□□□ -0.42
RAB5C-204ENST00000547517 CHRNB1P11230 501 aa12.41□□□□□ -0.42
RAB5C-204ENST00000547517 RPS9P46781 194 aaKnown RBP12.41□□□□□ -0.42
RAB5C-204ENST00000547517 COPB1P53618 953 aaKnown RBP12.41□□□□□ -0.42
RAB5C-204ENST00000547517 AMPD2Q01433 879 aa12.41□□□□□ -0.42
RAB5C-204ENST00000547517 EFEMP1Q12805 493 aa12.41□□□□□ -0.42
RAB5C-204ENST00000547517 NR1H3Q13133 447 aa12.41□□□□□ -0.42
RAB5C-204ENST00000547517 FZD5Q13467 585 aa12.41□□□□□ -0.42
RAB5C-204ENST00000547517 NCAPHQ15003 741 aa12.41□□□□□ -0.42
RAB5C-204ENST00000547517 FKBP15Q5T1M5 1219 aa12.41□□□□□ -0.42
RAB5C-204ENST00000547517 PM20D1Q6GTS8 502 aa12.41□□□□□ -0.42
RAB5C-204ENST00000547517 KLHDC10Q6PID8 442 aa12.41□□□□□ -0.42
RAB5C-204ENST00000547517 Q6ZS52 159 aa12.41□□□□□ -0.42
RAB5C-204ENST00000547517 C1orf210Q8IVY1 113 aa12.41□□□□□ -0.42
RAB5C-204ENST00000547517 BBS7Q8IWZ6 715 aa12.41□□□□□ -0.42
RAB5C-204ENST00000547517 KIAA1958Q8N8K9 716 aa12.41□□□□□ -0.42
RAB5C-204ENST00000547517 ATOH1Q92858 354 aaPredicted RBP12.41□□□□□ -0.42
RAB5C-204ENST00000547517 CDK5RAP1Q96SZ6 601 aaKnown RBP12.41□□□□□ -0.42
RAB5C-204ENST00000547517 KLF16Q9BXK1 252 aaPredicted RBP12.41□□□□□ -0.42
RAB5C-204ENST00000547517 CHRDQ9H2X0 955 aa12.41□□□□□ -0.42
RAB5C-204ENST00000547517 CNGB3Q9NQW8 809 aa12.41□□□□□ -0.42
RAB5C-204ENST00000547517 ST7Q9NRC1 585 aa12.41□□□□□ -0.42
RAB5C-204ENST00000547517 LSM7Q9UK45 103 aaKnown RBP12.41□□□□□ -0.42
RAB5C-204ENST00000547517 SYCE3A1L190 88 aa12.4□□□□□ -0.42
RAB5C-204ENST00000547517 YJEFN3A6XGL0 299 aa12.4□□□□□ -0.42
RAB5C-204ENST00000547517 E7ENQ6 273 aa12.4□□□□□ -0.42
RAB5C-204ENST00000547517 LAMTOR5O43504 91 aa12.4□□□□□ -0.42
RAB5C-204ENST00000547517 GABBR2O75899 941 aa12.4□□□□□ -0.42
RAB5C-204ENST00000547517 ADH1CP00326 375 aa12.4□□□□□ -0.42
RAB5C-204ENST00000547517 HMBSP08397 361 aa12.4□□□□□ -0.42
RAB5C-204ENST00000547517 UCHL3P15374 230 aa12.4□□□□□ -0.42
RAB5C-204ENST00000547517 ZNF18P17022 549 aa12.4□□□□□ -0.42
RAB5C-204ENST00000547517 PTMSP20962 102 aa12.4□□□□□ -0.42
RAB5C-204ENST00000547517 KLK7P49862 253 aa12.4□□□□□ -0.42
RAB5C-204ENST00000547517 DAOAP59103 153 aa12.4□□□□□ -0.42
RAB5C-204ENST00000547517 GRSF1Q12849 480 aaKnown RBP eCLIP12.4□□□□□ -0.42
RAB5C-204ENST00000547517 MTAPQ13126 283 aa12.4□□□□□ -0.42
RAB5C-204ENST00000547517 DRAP1Q14919 205 aaPredicted RBP12.4□□□□□ -0.42
RAB5C-204ENST00000547517 DHCR24Q15392 516 aa12.4□□□□□ -0.42
RAB5C-204ENST00000547517 KLHDC7AQ5VTJ3 777 aa12.4□□□□□ -0.42
RAB5C-204ENST00000547517 BTBD8Q5XKL5 378 aa12.4□□□□□ -0.42
RAB5C-204ENST00000547517 FSTL4Q6MZW2 842 aa12.4□□□□□ -0.42
RAB5C-204ENST00000547517 DPY19L2P1Q6NXN4 242 aa12.4□□□□□ -0.42
RAB5C-204ENST00000547517 PASD1Q8IV76 773 aa12.4□□□□□ -0.42
RAB5C-204ENST00000547517 CLEC4CQ8WTT0 213 aa12.4□□□□□ -0.42
RAB5C-204ENST00000547517 ZNF606Q8WXB4 792 aa12.4□□□□□ -0.42
RAB5C-204ENST00000547517 EDEM1Q92611 657 aa12.4□□□□□ -0.42
RAB5C-204ENST00000547517 P2RY13Q9BPV8 354 aa12.4□□□□□ -0.42
RAB5C-204ENST00000547517 MIS12Q9H081 205 aa12.4□□□□□ -0.42
RAB5C-204ENST00000547517 HSD3B7Q9H2F3 369 aa12.4□□□□□ -0.42
RAB5C-204ENST00000547517 MARCH2Q9P0N8 246 aa12.4□□□□□ -0.42
RAB5C-204ENST00000547517 TBC1D14Q9P2M4 693 aa12.4□□□□□ -0.42
RAB5C-204ENST00000547517 LIMA1Q9UHB6 759 aaKnown RBP12.4□□□□□ -0.42
RAB5C-204ENST00000547517 LGALS16A8MUM7 142 aa12.39□□□□□ -0.43
RAB5C-204ENST00000547517 FOXN3O00409 490 aaPredicted RBP12.39□□□□□ -0.43
RAB5C-204ENST00000547517 TRDMT1O14717 391 aaKnown RBP12.39□□□□□ -0.43
RAB5C-204ENST00000547517 STC2O76061 302 aa12.39□□□□□ -0.43
RAB5C-204ENST00000547517 EGFP01133 1207 aa12.39□□□□□ -0.43
RAB5C-204ENST00000547517 ADH5P11766 374 aa12.39□□□□□ -0.43
RAB5C-204ENST00000547517 ATP1A3P13637 1013 aa12.39□□□□□ -0.43
RAB5C-204ENST00000547517 CDK11BP21127 795 aaKnown RBP12.39□□□□□ -0.43
RAB5C-204ENST00000547517 GPD2P43304 727 aa12.39□□□□□ -0.43
RAB5C-204ENST00000547517 PTK2Q05397 1052 aa12.39□□□□□ -0.43
RAB5C-204ENST00000547517 PDCLQ13371 301 aa12.39□□□□□ -0.43
RAB5C-204ENST00000547517 CCINQ13939 588 aa12.39□□□□□ -0.43
RAB5C-204ENST00000547517 MEA1Q16626 185 aa12.39□□□□□ -0.43
RAB5C-204ENST00000547517 GAB4Q2WGN9 574 aa12.39□□□□□ -0.43
RAB5C-204ENST00000547517 TMEM196Q5HYL7 178 aa12.39□□□□□ -0.43
RAB5C-204ENST00000547517 DGKKQ5KSL6 1271 aa12.39□□□□□ -0.43
RAB5C-204ENST00000547517 BSPRYQ5W0U4 402 aa12.39□□□□□ -0.43
RAB5C-204ENST00000547517 SLC47A2Q86VL8 602 aa12.39□□□□□ -0.43
RAB5C-204ENST00000547517 DHX40Q8IX18 779 aaKnown RBP12.39□□□□□ -0.43
RAB5C-204ENST00000547517 SCML4Q8N228 414 aa12.39□□□□□ -0.43
RAB5C-204ENST00000547517 ZNF276Q8N554 614 aa12.39□□□□□ -0.43
RAB5C-204ENST00000547517 RNF139Q8WU17 664 aa12.39□□□□□ -0.43
RAB5C-204ENST00000547517 CD101Q93033 1021 aa12.39□□□□□ -0.43
RAB5C-204ENST00000547517 EXOC4Q96A65 974 aa12.39□□□□□ -0.43
RAB5C-204ENST00000547517 OTUB2Q96DC9 234 aa12.39□□□□□ -0.43
RAB5C-204ENST00000547517 HSFY1Q96LI6 401 aa12.39□□□□□ -0.43
RAB5C-204ENST00000547517 PCMTD1Q96MG8 357 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms