RNA–Protein interactions for RNA: ENST00000547515.1

LINC02409-201, Transcript of long intergenic non-protein coding RNA 2409, humanhuman

TSL 4 BASIC

Gene LINC02409, Length 576 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02409-201ENST00000547515 FAM3CQ92520 227 aa10.78□□□□□ -0.68
LINC02409-201ENST00000547515 CDK5RAP1Q96SZ6 601 aaKnown RBP10.78□□□□□ -0.68
LINC02409-201ENST00000547515 PRRX2Q99811 253 aa10.78□□□□□ -0.68
LINC02409-201ENST00000547515 KLF16Q9BXK1 252 aaPredicted RBP10.78□□□□□ -0.68
LINC02409-201ENST00000547515 NACA2Q9H009 215 aa10.78□□□□□ -0.68
LINC02409-201ENST00000547515 EBF3Q9H4W6 596 aa10.78□□□□□ -0.68
LINC02409-201ENST00000547515 ACP6Q9NPH0 428 aa10.78□□□□□ -0.68
LINC02409-201ENST00000547515 CNGB3Q9NQW8 809 aa10.78□□□□□ -0.68
LINC02409-201ENST00000547515 CFAP97Q9P2B7 532 aa10.78□□□□□ -0.68
LINC02409-201ENST00000547515 NAGPAQ9UK23 515 aa10.78□□□□□ -0.68
LINC02409-201ENST00000547515 PCDHGC3Q9UN70 934 aa10.78□□□□□ -0.68
LINC02409-201ENST00000547515 SIK3Q9Y2K2 1263 aa10.78□□□□□ -0.68
LINC02409-201ENST00000547515 MRPS17Q9Y2R5 130 aaKnown RBP10.78□□□□□ -0.68
LINC02409-201ENST00000547515 MTF2Q9Y483 593 aaPredicted RBP10.78□□□□□ -0.68
LINC02409-201ENST00000547515 DAAM1Q9Y4D1 1078 aa10.78□□□□□ -0.68
LINC02409-201ENST00000547515 WNT6Q9Y6F9 365 aa10.78□□□□□ -0.68
LINC02409-201ENST00000547515 PIEZO1Q92508 2521 aa10.78□□□□□ -0.68
LINC02409-201ENST00000547515 OTOL1A6NHN0 477 aaPredicted RBP10.77□□□□□ -0.69
LINC02409-201ENST00000547515 FAM170BA6NMN3 283 aa10.77□□□□□ -0.69
LINC02409-201ENST00000547515 SPECC1L-ADORA2AF8WAN1 911 aa10.77□□□□□ -0.69
LINC02409-201ENST00000547515 SLC9A3R1O14745 358 aaPredicted RBP10.77□□□□□ -0.69
LINC02409-201ENST00000547515 TBX18O95935 607 aa10.77□□□□□ -0.69
LINC02409-201ENST00000547515 ATP1A3P13637 1013 aa10.77□□□□□ -0.69
LINC02409-201ENST00000547515 CLCN1P35523 988 aa10.77□□□□□ -0.69
LINC02409-201ENST00000547515 MAGEA9P43362 315 aa10.77□□□□□ -0.69
LINC02409-201ENST00000547515 SOX9P48436 509 aa10.77□□□□□ -0.69
LINC02409-201ENST00000547515 RGS7P49802 495 aa10.77□□□□□ -0.69
LINC02409-201ENST00000547515 KLK7P49862 253 aa10.77□□□□□ -0.69
LINC02409-201ENST00000547515 DAOAP59103 153 aa10.77□□□□□ -0.69
LINC02409-201ENST00000547515 YWHAGP61981 247 aaKnown RBP eCLIP10.77□□□□□ -0.69
LINC02409-201ENST00000547515 PTK2Q05397 1052 aa10.77□□□□□ -0.69
LINC02409-201ENST00000547515 FZD5Q13467 585 aa10.77□□□□□ -0.69
LINC02409-201ENST00000547515 RAPGEF1Q13905 1077 aa10.77□□□□□ -0.69
LINC02409-201ENST00000547515 TXNDC11Q6PKC3 985 aa10.77□□□□□ -0.69
LINC02409-201ENST00000547515 SIX6OS1Q8N1H7 587 aa10.77□□□□□ -0.69
LINC02409-201ENST00000547515 CPA6Q8N4T0 437 aa10.77□□□□□ -0.69
LINC02409-201ENST00000547515 TTC8Q8TAM2 541 aa10.77□□□□□ -0.69
LINC02409-201ENST00000547515 STK32AQ8WU08 396 aa10.77□□□□□ -0.69
LINC02409-201ENST00000547515 IRGQQ8WZA9 623 aa10.77□□□□□ -0.69
LINC02409-201ENST00000547515 NDRG1Q92597 394 aaKnown RBP10.77□□□□□ -0.69
LINC02409-201ENST00000547515 ATP2A3Q93084 1043 aa10.77□□□□□ -0.69
LINC02409-201ENST00000547515 CLDN23Q96B33 292 aa10.77□□□□□ -0.69
LINC02409-201ENST00000547515 CHFRQ96EP1 664 aa10.77□□□□□ -0.69
LINC02409-201ENST00000547515 ERGIC2Q96RQ1 377 aa10.77□□□□□ -0.69
LINC02409-201ENST00000547515 SLC4A5Q9BY07 1137 aa10.77□□□□□ -0.69
LINC02409-201ENST00000547515 STK33Q9BYT3 514 aa10.77□□□□□ -0.69
LINC02409-201ENST00000547515 LINC00597Q9H2U6 94 aa10.77□□□□□ -0.69
LINC02409-201ENST00000547515 ECT2Q9H8V3 914 aa10.77□□□□□ -0.69
LINC02409-201ENST00000547515 TBC1D14Q9P2M4 693 aa10.77□□□□□ -0.69
LINC02409-201ENST00000547515 RAPGEFL1Q9UHV5 662 aa10.77□□□□□ -0.69
LINC02409-201ENST00000547515 DNMT3LQ9UJW3 386 aa10.77□□□□□ -0.69
LINC02409-201ENST00000547515 EML5Q05BV3 1969 aa10.76□□□□□ -0.69
LINC02409-201ENST00000547515 RIF1Q5UIP0 2472 aaKnown RBP10.76□□□□□ -0.69
LINC02409-201ENST00000547515 YJEFN3A6XGL0 299 aa10.76□□□□□ -0.69
LINC02409-201ENST00000547515 E7ENQ6 273 aa10.76□□□□□ -0.69
LINC02409-201ENST00000547515 F8VZ95 297 aa10.76□□□□□ -0.69
LINC02409-201ENST00000547515 HAX1O00165 279 aa10.76□□□□□ -0.69
LINC02409-201ENST00000547515 MDM4O15151 490 aa10.76□□□□□ -0.69
LINC02409-201ENST00000547515 NCAM2O15394 837 aa10.76□□□□□ -0.69
LINC02409-201ENST00000547515 GALR2O43603 387 aaPredicted RBP10.76□□□□□ -0.69
LINC02409-201ENST00000547515 GREM1O60565 184 aa10.76□□□□□ -0.69
LINC02409-201ENST00000547515 FBXO21O94952 628 aa10.76□□□□□ -0.69
LINC02409-201ENST00000547515 NFATC1O95644 943 aa10.76□□□□□ -0.69
LINC02409-201ENST00000547515 CAVIN2O95810 425 aa10.76□□□□□ -0.69
LINC02409-201ENST00000547515 DCNP07585 359 aaKnown RBP10.76□□□□□ -0.69
LINC02409-201ENST00000547515 PNMA6AP0CW24 399 aaPredicted RBP10.76□□□□□ -0.69
LINC02409-201ENST00000547515 LCP1P13796 627 aa10.76□□□□□ -0.69
LINC02409-201ENST00000547515 ACADSBP45954 432 aa10.76□□□□□ -0.69
LINC02409-201ENST00000547515 RPS9P46781 194 aaKnown RBP10.76□□□□□ -0.69
LINC02409-201ENST00000547515 BPIFB4P59827 614 aa10.76□□□□□ -0.69
LINC02409-201ENST00000547515 AMPD2Q01433 879 aa10.76□□□□□ -0.69
LINC02409-201ENST00000547515 SYCP1Q15431 976 aa10.76□□□□□ -0.69
LINC02409-201ENST00000547515 ZSCAN23Q3MJ62 389 aa10.76□□□□□ -0.69
LINC02409-201ENST00000547515 C10orf120Q5SQS8 335 aa10.76□□□□□ -0.69
LINC02409-201ENST00000547515 BSPRYQ5W0U4 402 aa10.76□□□□□ -0.69
LINC02409-201ENST00000547515 SLC47A2Q86VL8 602 aa10.76□□□□□ -0.69
LINC02409-201ENST00000547515 WDTC1Q8N5D0 677 aa10.76□□□□□ -0.69
LINC02409-201ENST00000547515 DTWD2Q8NBA8 298 aa10.76□□□□□ -0.69
LINC02409-201ENST00000547515 TTC16Q8NEE8 873 aa10.76□□□□□ -0.69
LINC02409-201ENST00000547515 PRSS33Q8NF86 280 aa10.76□□□□□ -0.69
LINC02409-201ENST00000547515 WBP2Q969T9 261 aa10.76□□□□□ -0.69
LINC02409-201ENST00000547515 OTUB2Q96DC9 234 aa10.76□□□□□ -0.69
LINC02409-201ENST00000547515 LHX5Q9H2C1 402 aa10.76□□□□□ -0.69
LINC02409-201ENST00000547515 CYTH4Q9UIA0 394 aa10.76□□□□□ -0.69
LINC02409-201ENST00000547515 NUDT5Q9UKK9 219 aa10.76□□□□□ -0.69
LINC02409-201ENST00000547515 SH3BP1Q9Y3L3 701 aa10.76□□□□□ -0.69
LINC02409-201ENST00000547515 FAM186AA6NE01 2351 aa10.76□□□□□ -0.69
LINC02409-201ENST00000547515 TRDMT1O14717 391 aaKnown RBP10.75□□□□□ -0.69
LINC02409-201ENST00000547515 EPHB6O15197 1021 aa10.75□□□□□ -0.69
LINC02409-201ENST00000547515 IRF1P10914 325 aa10.75□□□□□ -0.69
LINC02409-201ENST00000547515 CHRNB1P11230 501 aa10.75□□□□□ -0.69
LINC02409-201ENST00000547515 CYP11B1P15538 503 aa10.75□□□□□ -0.69
LINC02409-201ENST00000547515 GJA4P35212 333 aa10.75□□□□□ -0.69
LINC02409-201ENST00000547515 JAM2P57087 298 aa10.75□□□□□ -0.69
LINC02409-201ENST00000547515 POLR2FP61218 127 aaKnown RBP10.75□□□□□ -0.69
LINC02409-201ENST00000547515 UBXN1Q04323 297 aa10.75□□□□□ -0.69
LINC02409-201ENST00000547515 GOLGA8FQ08AF8 430 aa10.75□□□□□ -0.69
LINC02409-201ENST00000547515 GOLGA8DPQ0D2H9 430 aa10.75□□□□□ -0.69
LINC02409-201ENST00000547515 NR1H3Q13133 447 aa10.75□□□□□ -0.69
LINC02409-201ENST00000547515 GAB4Q2WGN9 574 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms