RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 SRGAP2BP0DMP2 458 aa13.24□□□□□ -0.29
SCAF11-209ENST00000547018 MMP13P45452 471 aa13.24□□□□□ -0.29
SCAF11-209ENST00000547018 TKTL1P51854 596 aa13.24□□□□□ -0.29
SCAF11-209ENST00000547018 PURAQ00577 322 aaKnown RBP13.24□□□□□ -0.29
SCAF11-209ENST00000547018 PRKCZQ05513 592 aa13.24□□□□□ -0.29
SCAF11-209ENST00000547018 ANKRD20A8PQ5CZ79 823 aa13.24□□□□□ -0.29
SCAF11-209ENST00000547018 ERMARDQ5T6L9 678 aa13.24□□□□□ -0.29
SCAF11-209ENST00000547018 PPP1R2P3Q6NXS1 205 aa13.24□□□□□ -0.29
SCAF11-209ENST00000547018 OLFML1Q6UWY5 402 aa13.24□□□□□ -0.29
SCAF11-209ENST00000547018 DENND5BQ6ZUT9 1274 aa13.24□□□□□ -0.29
SCAF11-209ENST00000547018 IFNL1Q8IU54 200 aa13.24□□□□□ -0.29
SCAF11-209ENST00000547018 SLC35F5Q8WV83 523 aa13.24□□□□□ -0.29
SCAF11-209ENST00000547018 PRCCQ92733 491 aaPredicted RBP13.24□□□□□ -0.29
SCAF11-209ENST00000547018 RNF157Q96PX1 679 aa13.24□□□□□ -0.29
SCAF11-209ENST00000547018 SPC25Q9HBM1 224 aa13.24□□□□□ -0.29
SCAF11-209ENST00000547018 PRG3Q9Y2Y8 225 aaPredicted RBP13.24□□□□□ -0.29
SCAF11-209ENST00000547018 OR4Q2P0C623 313 aa13.23□□□□□ -0.29
SCAF11-209ENST00000547018 NCAM1P13591 858 aa13.23□□□□□ -0.29
SCAF11-209ENST00000547018 GBP2P32456 591 aaPredicted RBP13.23□□□□□ -0.29
SCAF11-209ENST00000547018 BMPR2Q13873 1038 aa13.23□□□□□ -0.29
SCAF11-209ENST00000547018 LRRC38Q5VT99 294 aa13.23□□□□□ -0.29
SCAF11-209ENST00000547018 KCNT2Q6UVM3 1135 aa13.23□□□□□ -0.29
SCAF11-209ENST00000547018 SYDE1Q6ZW31 735 aaPredicted RBP13.23□□□□□ -0.29
SCAF11-209ENST00000547018 SAPCD2Q86UD0 394 aa13.23□□□□□ -0.29
SCAF11-209ENST00000547018 UNC5BQ8IZJ1 945 aa13.23□□□□□ -0.29
SCAF11-209ENST00000547018 CNPY4Q8N129 248 aa13.23□□□□□ -0.29
SCAF11-209ENST00000547018 TRIB2Q92519 343 aa13.23□□□□□ -0.29
SCAF11-209ENST00000547018 SLC13A1Q9BZW2 595 aa13.23□□□□□ -0.29
SCAF11-209ENST00000547018 CNOT10Q9H9A5 744 aaKnown RBP13.23□□□□□ -0.29
SCAF11-209ENST00000547018 PCDH9Q9HC56 1237 aa13.23□□□□□ -0.29
SCAF11-209ENST00000547018 UBP1Q9NZI7 540 aa13.23□□□□□ -0.29
SCAF11-209ENST00000547018 SLC17A6Q9P2U8 582 aa13.23□□□□□ -0.29
SCAF11-209ENST00000547018 KBTBD13C9JR72 458 aa13.23□□□□□ -0.29
SCAF11-209ENST00000547018 APOC4-APOC2K7ER74 178 aa13.23□□□□□ -0.29
SCAF11-209ENST00000547018 PTGESO14684 152 aa13.23□□□□□ -0.29
SCAF11-209ENST00000547018 MOCS2O96007 188 aaPredicted RBP13.23□□□□□ -0.29
SCAF11-209ENST00000547018 APOC2P02655 101 aa13.23□□□□□ -0.29
SCAF11-209ENST00000547018 RPA3P35244 121 aaPredicted RBP13.23□□□□□ -0.29
SCAF11-209ENST00000547018 CORO7P57737 925 aa13.23□□□□□ -0.29
SCAF11-209ENST00000547018 BST2Q10589 180 aaKnown RBP13.23□□□□□ -0.29
SCAF11-209ENST00000547018 OVGP1Q12889 678 aa13.23□□□□□ -0.29
SCAF11-209ENST00000547018 UBXN11Q5T124 520 aa13.23□□□□□ -0.29
SCAF11-209ENST00000547018 HHATQ5VTY9 493 aa13.23□□□□□ -0.29
SCAF11-209ENST00000547018 VSTM1Q6UX27 236 aa13.23□□□□□ -0.29
SCAF11-209ENST00000547018 MICALCLQ6ZW33 695 aa13.23□□□□□ -0.29
SCAF11-209ENST00000547018 PPIL6Q8IXY8 311 aa13.23□□□□□ -0.29
SCAF11-209ENST00000547018 C3orf58Q8NDZ4 430 aa13.23□□□□□ -0.29
SCAF11-209ENST00000547018 PLXNA1Q9UIW2 1896 aa13.23□□□□□ -0.29
SCAF11-209ENST00000547018 AKR1A1P14550 325 aa13.23□□□□□ -0.29
SCAF11-209ENST00000547018 DRD4P21917 467 aa13.23□□□□□ -0.29
SCAF11-209ENST00000547018 MSH2P43246 934 aa13.23□□□□□ -0.29
SCAF11-209ENST00000547018 CACNA2D1P54289 1103 aa13.23□□□□□ -0.29
SCAF11-209ENST00000547018 CAV1Q03135 178 aa13.23□□□□□ -0.29
SCAF11-209ENST00000547018 INCA1Q0VD86 236 aa13.23□□□□□ -0.29
SCAF11-209ENST00000547018 TFDP2Q14188 446 aa13.23□□□□□ -0.29
SCAF11-209ENST00000547018 MORN1Q5T089 497 aa13.23□□□□□ -0.29
SCAF11-209ENST00000547018 ZNF467Q7Z7K2 595 aaPredicted RBP13.23□□□□□ -0.29
SCAF11-209ENST00000547018 CEP57Q86XR8 500 aa13.23□□□□□ -0.29
SCAF11-209ENST00000547018 SCN4BQ8IWT1 228 aa13.23□□□□□ -0.29
SCAF11-209ENST00000547018 FUKQ8N0W3 1084 aa13.23□□□□□ -0.29
SCAF11-209ENST00000547018 CCDC197Q8NCU1 140 aa13.23□□□□□ -0.29
SCAF11-209ENST00000547018 CMASQ8NFW8 434 aaPredicted RBP13.23□□□□□ -0.29
SCAF11-209ENST00000547018 GPR152Q8TDT2 470 aa13.23□□□□□ -0.29
SCAF11-209ENST00000547018 USP33Q8TEY7 942 aa13.23□□□□□ -0.29
SCAF11-209ENST00000547018 EMID1Q96A84 441 aaPredicted RBP13.23□□□□□ -0.29
SCAF11-209ENST00000547018 SMC6Q96SB8 1091 aa13.23□□□□□ -0.29
SCAF11-209ENST00000547018 LBHD1Q9BQE6 289 aaPredicted RBP13.23□□□□□ -0.29
SCAF11-209ENST00000547018 ULBP1Q9BZM6 244 aa13.23□□□□□ -0.29
SCAF11-209ENST00000547018 MAF1Q9H063 256 aa13.23□□□□□ -0.29
SCAF11-209ENST00000547018 DCTN4Q9UJW0 460 aa13.23□□□□□ -0.29
SCAF11-209ENST00000547018 COL1A2P08123 1366 aa13.22□□□□□ -0.29
SCAF11-209ENST00000547018 NRP1O14786 923 aa13.22□□□□□ -0.29
SCAF11-209ENST00000547018 AOC2O75106 756 aa13.22□□□□□ -0.29
SCAF11-209ENST00000547018 CD4P01730 458 aa13.22□□□□□ -0.29
SCAF11-209ENST00000547018 ITGAVP06756 1048 aa13.22□□□□□ -0.29
SCAF11-209ENST00000547018 ASGR1P07306 291 aa13.22□□□□□ -0.29
SCAF11-209ENST00000547018 PTPN1P18031 435 aaKnown RBP13.22□□□□□ -0.29
SCAF11-209ENST00000547018 BDNFP23560 247 aa13.22□□□□□ -0.29
SCAF11-209ENST00000547018 CCND3P30281 292 aaPredicted RBP13.22□□□□□ -0.29
SCAF11-209ENST00000547018 ABCG1P45844 678 aa13.22□□□□□ -0.29
SCAF11-209ENST00000547018 BCAT1P54687 386 aa13.22□□□□□ -0.29
SCAF11-209ENST00000547018 MCCD1P59942 119 aaPredicted RBP13.22□□□□□ -0.29
SCAF11-209ENST00000547018 TTC13Q8NBP0 860 aa13.22□□□□□ -0.29
SCAF11-209ENST00000547018 KHSRPQ92945 711 aaKnown RBP eCLIP13.22□□□□□ -0.291e-6■■■□□ 16.8
SCAF11-209ENST00000547018 ZNF560Q96MR9 790 aa13.22□□□□□ -0.29
SCAF11-209ENST00000547018 SERPINB12Q96P63 405 aa13.22□□□□□ -0.29
SCAF11-209ENST00000547018 FAM105AQ9NUU6 356 aa13.22□□□□□ -0.29
SCAF11-209ENST00000547018 MYO9BQ13459 2157 aa13.22□□□□□ -0.29
SCAF11-209ENST00000547018 UGT1A9O60656 530 aa13.22□□□□□ -0.29
SCAF11-209ENST00000547018 THP07101 528 aa13.22□□□□□ -0.29
SCAF11-209ENST00000547018 ARL4AP40617 200 aa13.22□□□□□ -0.29
SCAF11-209ENST00000547018 GPX6P59796 221 aa13.22□□□□□ -0.29
SCAF11-209ENST00000547018 POU5F1BQ06416 359 aa13.22□□□□□ -0.29
SCAF11-209ENST00000547018 SLC10A2Q12908 348 aaPredicted RBP13.22□□□□□ -0.29
SCAF11-209ENST00000547018 MORF4L2Q15014 288 aa13.22□□□□□ -0.29
SCAF11-209ENST00000547018 RWDD4Q6NW29 188 aaKnown RBP13.22□□□□□ -0.29
SCAF11-209ENST00000547018 POLNQ7Z5Q5 900 aa13.22□□□□□ -0.29
SCAF11-209ENST00000547018 TADA2BQ86TJ2 420 aa13.22□□□□□ -0.29
SCAF11-209ENST00000547018 ANKRD52Q8NB46 1076 aa13.22□□□□□ -0.29
SCAF11-209ENST00000547018 ATXN2LQ8WWM7 1075 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms