RNA–Protein interactions for RNA: ENST00000546417.5

BRF1-207, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-207ENST00000546417 PRRT4C9JH25 899 aa12.76□□□□□ -0.37
BRF1-207ENST00000546417 ERVH48-1M5A8F1 160 aa12.76□□□□□ -0.37
BRF1-207ENST00000546417 COCHO43405 550 aa12.76□□□□□ -0.37
BRF1-207ENST00000546417 PCDHGA12O60330 932 aa12.76□□□□□ -0.37
BRF1-207ENST00000546417 CACNG3O60359 315 aa12.76□□□□□ -0.37
BRF1-207ENST00000546417 CDK4P11802 303 aa12.76□□□□□ -0.37
BRF1-207ENST00000546417 LMO2P25791 158 aa12.76□□□□□ -0.37
BRF1-207ENST00000546417 CSNK1EP49674 416 aaKnown RBP12.76□□□□□ -0.37
BRF1-207ENST00000546417 ANAPC15P60006 121 aa12.76□□□□□ -0.37
BRF1-207ENST00000546417 KCNC4Q03721 635 aa12.76□□□□□ -0.37
BRF1-207ENST00000546417 MYO1EQ12965 1108 aa12.76□□□□□ -0.37
BRF1-207ENST00000546417 TEAD4Q15561 434 aa12.76□□□□□ -0.37
BRF1-207ENST00000546417 TAF1BQ53T94 588 aaPredicted RBP12.76□□□□□ -0.37
BRF1-207ENST00000546417 C1orf216Q8TAB5 229 aa12.76□□□□□ -0.37
BRF1-207ENST00000546417 SNIP1Q8TAD8 396 aaKnown RBP12.76□□□□□ -0.37
BRF1-207ENST00000546417 MYCBPAPQ8TBZ2 947 aa12.76□□□□□ -0.37
BRF1-207ENST00000546417 OVCA2Q8WZ82 227 aa12.76□□□□□ -0.37
BRF1-207ENST00000546417 PCED1BQ96HM7 432 aa12.76□□□□□ -0.37
BRF1-207ENST00000546417 ZFRQ96KR1 1074 aaKnown RBP12.76□□□□□ -0.37
BRF1-207ENST00000546417 NUP58Q9BVL2 599 aa12.76□□□□□ -0.37
BRF1-207ENST00000546417 NRSN2Q9GZP1 204 aa12.76□□□□□ -0.37
BRF1-207ENST00000546417 PCED1AQ9H1Q7 454 aa12.76□□□□□ -0.37
BRF1-207ENST00000546417 CRTAC1Q9NQ79 661 aa12.76□□□□□ -0.37
BRF1-207ENST00000546417 GMIPQ9P107 970 aa12.76□□□□□ -0.37
BRF1-207ENST00000546417 WDR35Q9P2L0 1181 aa12.76□□□□□ -0.37
BRF1-207ENST00000546417 FTSJ1Q9UET6 329 aa12.76□□□□□ -0.37
BRF1-207ENST00000546417 MGAQ8IWI9 3026 aa12.76□□□□□ -0.37
BRF1-207ENST00000546417 MYH10P35580 1976 aa12.76□□□□□ -0.37
BRF1-207ENST00000546417 ATMQ13315 3056 aa12.75□□□□□ -0.37
BRF1-207ENST00000546417 WASH3PC4AMC7 463 aa12.75□□□□□ -0.37
BRF1-207ENST00000546417 NEDD8-MDP1E9PL57 170 aa12.75□□□□□ -0.37
BRF1-207ENST00000546417 TBCAO75347 108 aaKnown RBP12.75□□□□□ -0.37
BRF1-207ENST00000546417 KRT18P05783 430 aaKnown RBP12.75□□□□□ -0.37
BRF1-207ENST00000546417 PDGFRBP09619 1106 aa12.75□□□□□ -0.37
BRF1-207ENST00000546417 TYRP14679 529 aa12.75□□□□□ -0.37
BRF1-207ENST00000546417 YWHAQP27348 245 aa12.75□□□□□ -0.37
BRF1-207ENST00000546417 CCT8P50990 548 aa12.75□□□□□ -0.37
BRF1-207ENST00000546417 TPMTP51580 245 aa12.75□□□□□ -0.37
BRF1-207ENST00000546417 IFRD2Q12894 506 aaPredicted RBP12.75□□□□□ -0.37
BRF1-207ENST00000546417 KIF19Q2TAC6 998 aa12.75□□□□□ -0.37
BRF1-207ENST00000546417 FUT11Q495W5 492 aa12.75□□□□□ -0.37
BRF1-207ENST00000546417 TMEM119Q4V9L6 283 aa12.75□□□□□ -0.37
BRF1-207ENST00000546417 HECTD3Q5T447 861 aa12.75□□□□□ -0.37
BRF1-207ENST00000546417 PCSK4Q6UW60 755 aa12.75□□□□□ -0.37
BRF1-207ENST00000546417 HS2ST1Q7LGA3 356 aa12.75□□□□□ -0.37
BRF1-207ENST00000546417 BRSK2Q8IWQ3 736 aa12.75□□□□□ -0.37
BRF1-207ENST00000546417 KRI1Q8N9T8 703 aaKnown RBP12.75□□□□□ -0.37
BRF1-207ENST00000546417 CXorf38Q8TB03 319 aa12.75□□□□□ -0.37
BRF1-207ENST00000546417 KBTBD7Q8WVZ9 684 aa12.75□□□□□ -0.37
BRF1-207ENST00000546417 IGSF8Q969P0 613 aa12.75□□□□□ -0.37
BRF1-207ENST00000546417 FBXO32Q969P5 355 aa12.75□□□□□ -0.37
BRF1-207ENST00000546417 WBP1Q96G27 269 aa12.75□□□□□ -0.37
BRF1-207ENST00000546417 FIZ1Q96SL8 496 aa12.75□□□□□ -0.37
BRF1-207ENST00000546417 FAM213AQ9BRX8 229 aa12.75□□□□□ -0.37
BRF1-207ENST00000546417 BBS2Q9BXC9 721 aa12.75□□□□□ -0.37
BRF1-207ENST00000546417 ST6GALNAC4Q9H4F1 302 aa12.75□□□□□ -0.37
BRF1-207ENST00000546417 PCDHGA1Q9Y5H4 931 aa12.75□□□□□ -0.37
BRF1-207ENST00000546417 SNX11Q9Y5W9 270 aa12.75□□□□□ -0.37
BRF1-207ENST00000546417 STON1Q9Y6Q2 735 aa12.75□□□□□ -0.37
BRF1-207ENST00000546417 KCNJ18B7U540 433 aa12.74□□□□□ -0.37
BRF1-207ENST00000546417 NPC1O15118 1278 aa12.74□□□□□ -0.37
BRF1-207ENST00000546417 RTN3O95197 1032 aaPredicted RBP12.74□□□□□ -0.37
BRF1-207ENST00000546417 LDHAP00338 332 aaKnown RBP12.74□□□□□ -0.37
BRF1-207ENST00000546417 IGLV3-19P01714 112 aa12.74□□□□□ -0.37
BRF1-207ENST00000546417 ACADMP11310 421 aa12.74□□□□□ -0.37
BRF1-207ENST00000546417 ADSSP30520 456 aa12.74□□□□□ -0.37
BRF1-207ENST00000546417 DGKGP49619 791 aa12.74□□□□□ -0.37
BRF1-207ENST00000546417 TUBP50607 506 aa12.74□□□□□ -0.37
BRF1-207ENST00000546417 WNT7BP56706 349 aa12.74□□□□□ -0.37
BRF1-207ENST00000546417 CXADRP78310 365 aa12.74□□□□□ -0.37
BRF1-207ENST00000546417 DHX8Q14562 1220 aaKnown RBP12.74□□□□□ -0.37
BRF1-207ENST00000546417 RTP5Q14D33 572 aa12.74□□□□□ -0.37
BRF1-207ENST00000546417 LIMS2Q7Z4I7 341 aa12.74□□□□□ -0.37
BRF1-207ENST00000546417 TMPRSS6Q8IU80 811 aa12.74□□□□□ -0.37
BRF1-207ENST00000546417 LURAP1LQ8IV03 231 aa12.74□□□□□ -0.37
BRF1-207ENST00000546417 NUP93Q8N1F7 819 aa12.74□□□□□ -0.37
BRF1-207ENST00000546417 PRCCQ92733 491 aaPredicted RBP12.74□□□□□ -0.37
BRF1-207ENST00000546417 FGF11Q92914 225 aa12.74□□□□□ -0.37
BRF1-207ENST00000546417 SIPA1Q96FS4 1042 aa12.74□□□□□ -0.37
BRF1-207ENST00000546417 MKRN2Q9H000 416 aaKnown RBP12.74□□□□□ -0.37
BRF1-207ENST00000546417 RBAKQ9NYW8 714 aaPredicted RBP12.74□□□□□ -0.37
BRF1-207ENST00000546417 SIX4Q9UIU6 781 aa12.74□□□□□ -0.37
BRF1-207ENST00000546417 ANKRD6Q9Y2G4 727 aa12.74□□□□□ -0.37
BRF1-207ENST00000546417 GTF3C3Q9Y5Q9 886 aa12.74□□□□□ -0.37
BRF1-207ENST00000546417 MYLKQ15746 1914 aa12.74□□□□□ -0.37
BRF1-207ENST00000546417 COL5A1P20908 1838 aaPredicted RBP12.74□□□□□ -0.37
BRF1-207ENST00000546417 SLC26A4O43511 780 aa12.73□□□□□ -0.37
BRF1-207ENST00000546417 DFNA5O60443 496 aa12.73□□□□□ -0.37
BRF1-207ENST00000546417 SYNCRIPO60506 623 aaKnown RBP12.73□□□□□ -0.37
BRF1-207ENST00000546417 C1SP09871 688 aa12.73□□□□□ -0.37
BRF1-207ENST00000546417 TMEM191BP0C7N4 346 aa12.73□□□□□ -0.37
BRF1-207ENST00000546417 IRF1P10914 325 aa12.73□□□□□ -0.37
BRF1-207ENST00000546417 WARSP23381 471 aaKnown RBP12.73□□□□□ -0.37
BRF1-207ENST00000546417 RHDQ02161 417 aa12.73□□□□□ -0.37
BRF1-207ENST00000546417 TLE3Q04726 772 aa12.73□□□□□ -0.37
BRF1-207ENST00000546417 ORC1Q13415 861 aa12.73□□□□□ -0.37
BRF1-207ENST00000546417 E2F5Q15329 346 aa12.73□□□□□ -0.37
BRF1-207ENST00000546417 MDH1BQ5I0G3 518 aa12.73□□□□□ -0.37
BRF1-207ENST00000546417 SNX30Q5VWJ9 437 aa12.73□□□□□ -0.37
BRF1-207ENST00000546417 SCARA3Q6AZY7 606 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 221.9 ms