RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 SNX25Q9H3E2 840 aa6.74□□□□□ -1.33
PRKDC-211ENST00000546304 FAM124BQ9H5Z6 455 aaPredicted RBP6.74□□□□□ -1.33
PRKDC-211ENST00000546304 RXFP1Q9HBX9 757 aa6.74□□□□□ -1.33
PRKDC-211ENST00000546304 SIX2Q9NPC8 291 aa6.74□□□□□ -1.33
PRKDC-211ENST00000546304 DDX43Q9NXZ2 648 aaKnown RBP6.74□□□□□ -1.33
PRKDC-211ENST00000546304 FNIP2Q9P278 1114 aa6.74□□□□□ -1.33
PRKDC-211ENST00000546304 A0A0C4DFX4 3053 aa6.74□□□□□ -1.33
PRKDC-211ENST00000546304 WDR27A2RRH5 827 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 A8MXQ7 604 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 GSC2O15499 205 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 CLASP2O75122 1294 aaKnown RBP6.73□□□□□ -1.33
PRKDC-211ENST00000546304 CILPO75339 1184 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 GLP2RO95838 553 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 B3GALT4O96024 378 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 GLUD1P00367 558 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 TPM3P06753 285 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 WEE2P0C1S8 567 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 OR4Q2P0C623 313 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 SLC9A1P19634 815 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 OR1D2P34982 312 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 PREPP48147 710 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 KLK7P49862 253 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 NDST1P52848 882 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 CDH8P55286 799 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 ARPP19P56211 112 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 APBA1Q02410 837 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 GSTM4Q03013 218 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 HYAL1Q12794 435 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 SLC39A12Q504Y0 691 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 XP32Q5T750 250 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 GJB7Q6PEY0 223 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 RSPO2Q6UXX9 243 aaPredicted RBP6.73□□□□□ -1.33
PRKDC-211ENST00000546304 RRAGAQ7L523 313 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 ENOSF1Q7L5Y1 443 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 RBM23Q86U06 439 aaKnown RBP6.73□□□□□ -1.33
PRKDC-211ENST00000546304 PPFIBP1Q86W92 1011 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 FAM20CQ8IXL6 584 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 THEM5Q8N1Q8 247 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 UBR7Q8N806 425 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 B3GALNT2Q8NCR0 500 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 OR6B3Q8NGW1 331 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 KAT5Q92993 513 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 MYLPFQ96A32 169 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 FAM81BQ96LP2 452 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 KREMEN1Q96MU8 473 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 PGLYRP2Q96PD5 576 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 KLHL5Q96PQ7 755 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 TWNKQ96RR1 684 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 TMEM209Q96SK2 561 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 PKMYT1Q99640 499 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 ACBD6Q9BR61 282 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 ZCWPW1Q9H0M4 648 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 GANQ9H2C0 597 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 DPEP3Q9H4B8 488 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 TLE6Q9H808 572 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 ABCB6Q9NP58 842 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 PLCB1Q9NQ66 1216 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 CISHQ9NSE2 258 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 FAM207AQ9NSI2 230 aaPredicted RBP6.73□□□□□ -1.33
PRKDC-211ENST00000546304 IFNKQ9P0W0 207 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 STOML1Q9UBI4 398 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 FBXW11Q9UKB1 542 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 AJAP1Q9UKB5 411 aaPredicted RBP6.73□□□□□ -1.33
PRKDC-211ENST00000546304 CDH9Q9ULB4 789 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 BARX2Q9UMQ3 279 aaPredicted RBP6.73□□□□□ -1.33
PRKDC-211ENST00000546304 SIK3Q9Y2K2 1263 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 STXBP5LQ9Y2K9 1186 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 NME7Q9Y5B8 376 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 HCFC2Q9Y5Z7 792 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 FHOD1Q9Y613 1164 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 DENND4CQ5VZ89 1909 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 DOCK8Q8NF50 2099 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 TTC28Q96AY4 2481 aa6.73□□□□□ -1.33
PRKDC-211ENST00000546304 A0A1W2PQC6 194 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 MTMR11A4FU01 709 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 F8VZ95 297 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 PER2O15055 1255 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 EPHB6O15197 1021 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 TEX33O43247 280 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 CBFA2T2O43439 604 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 TGM5O43548 720 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 TBX10O75333 385 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 TIAF1O95411 115 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 DLGAP3O95886 979 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 FAM163BP0C2L3 166 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 SRGAP2BP0DMP2 458 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 UCHL3P15374 230 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 EPCAMP16422 314 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 TRIM21P19474 475 aaKnown RBP6.72□□□□□ -1.33
PRKDC-211ENST00000546304 ACO1P21399 889 aaKnown RBP6.72□□□□□ -1.33
PRKDC-211ENST00000546304 LMO2P25791 158 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 KLRC2P26717 231 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 MAPK1P28482 360 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 GTF2F1P35269 517 aaKnown RBP eCLIP6.72□□□□□ -1.33
PRKDC-211ENST00000546304 GNL1P36915 607 aaPredicted RBP6.72□□□□□ -1.33
PRKDC-211ENST00000546304 CLCN4P51793 760 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 ZNF132P52740 706 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 MFAP3P55082 362 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 UBASH3AP57075 661 aa6.72□□□□□ -1.33
PRKDC-211ENST00000546304 GPR17Q13304 367 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms