RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 CORO1CQ9ULV4 474 aaPredicted RBP10.16□□□□□ -0.78
TRAF1-203ENST00000546084 SMG5Q9UPR3 1016 aaKnown RBP10.16□□□□□ -0.78
TRAF1-203ENST00000546084 DLEC1Q9Y238 1755 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 H3BRB1 525 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 NFKBIEO00221 500 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 HUS1O60921 280 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 C6orf222P0C671 652 aaPredicted RBP10.16□□□□□ -0.78
TRAF1-203ENST00000546084 RFC5P40937 340 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 SULT1E1P49888 294 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 RASIP1Q5U651 963 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 LAYNQ6UX15 382 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 CATSPERGQ6ZRH7 1159 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 RGS9BPQ6ZS82 235 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 TRIM74Q86UV6 250 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 TRIM73Q86UV7 250 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 PPIL6Q8IXY8 311 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 STKLD1Q8NE28 680 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 CLPTM1LQ96KA5 538 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 NACA2Q9H009 215 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 SMARCAD1Q9H4L7 1026 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 TUT1Q9H6E5 874 aaKnown RBP10.16□□□□□ -0.78
TRAF1-203ENST00000546084 CPA4Q9UI42 421 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 A0A0B4J269 797 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 AP1G2O75843 785 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 CENPCQ03188 943 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 MSS51Q4VC12 460 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 METTL7BQ6UX53 244 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 OTOAQ7RTW8 1153 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 CRLF3Q8IUI8 442 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 RFWD2Q8NHY2 731 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 ZNF483Q8TF39 744 aaPredicted RBP10.16□□□□□ -0.78
TRAF1-203ENST00000546084 DNAJB3Q8WWF6 145 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 ZNF75CPQ92670 426 aaPredicted RBP10.16□□□□□ -0.78
TRAF1-203ENST00000546084 UTP4Q969X6 686 aaKnown RBP10.16□□□□□ -0.78
TRAF1-203ENST00000546084 ERAP1Q9NZ08 941 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 STARD13Q9Y3M8 1113 aa10.16□□□□□ -0.78
TRAF1-203ENST00000546084 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.15□□□□□ -0.78
TRAF1-203ENST00000546084 M0QYT0 321 aa10.15□□□□□ -0.78
TRAF1-203ENST00000546084 PPEF2O14830 753 aa10.15□□□□□ -0.78
TRAF1-203ENST00000546084 PSTPIP1O43586 416 aa10.15□□□□□ -0.78
TRAF1-203ENST00000546084 LRCH4O75427 683 aa10.15□□□□□ -0.78
TRAF1-203ENST00000546084 TPBGLP0DKB5 382 aa10.15□□□□□ -0.78
TRAF1-203ENST00000546084 CYP2C9P11712 490 aa10.15□□□□□ -0.78
TRAF1-203ENST00000546084 KDELR1P24390 212 aa10.15□□□□□ -0.78
TRAF1-203ENST00000546084 ABL2P42684 1182 aa10.15□□□□□ -0.78
TRAF1-203ENST00000546084 SLC12A2P55011 1212 aa10.15□□□□□ -0.78
TRAF1-203ENST00000546084 AQP5P55064 265 aa10.15□□□□□ -0.78
TRAF1-203ENST00000546084 MRPS35P82673 323 aaKnown RBP10.15□□□□□ -0.78
TRAF1-203ENST00000546084 SNX30Q5VWJ9 437 aa10.15□□□□□ -0.78
TRAF1-203ENST00000546084 C4orf50Q6ZRC1 276 aa10.15□□□□□ -0.78
TRAF1-203ENST00000546084 ASRGL1Q7L266 308 aa10.15□□□□□ -0.78
TRAF1-203ENST00000546084 BRSK2Q8IWQ3 736 aa10.15□□□□□ -0.78
TRAF1-203ENST00000546084 SAMD3Q8N6K7 520 aa10.15□□□□□ -0.78
TRAF1-203ENST00000546084 C12orf50Q8NA57 414 aaPredicted RBP10.15□□□□□ -0.78
TRAF1-203ENST00000546084 TTC25Q96NG3 672 aa10.15□□□□□ -0.78
TRAF1-203ENST00000546084 GBP5Q96PP8 586 aa10.15□□□□□ -0.78
TRAF1-203ENST00000546084 DDX50Q9BQ39 737 aaKnown RBP10.15□□□□□ -0.78
TRAF1-203ENST00000546084 TRIM4Q9C037 500 aa10.15□□□□□ -0.78
TRAF1-203ENST00000546084 LRMDAQ9H2I8 198 aa10.15□□□□□ -0.78
TRAF1-203ENST00000546084 PRKAG3Q9UGI9 489 aa10.15□□□□□ -0.78
TRAF1-203ENST00000546084 KLRG2A4D1S0 409 aaPredicted RBP10.15□□□□□ -0.78
TRAF1-203ENST00000546084 CCDC22O60826 627 aa10.15□□□□□ -0.78
TRAF1-203ENST00000546084 PEX11AO75192 247 aa10.15□□□□□ -0.78
TRAF1-203ENST00000546084 LYPLA1O75608 230 aaPredicted RBP10.15□□□□□ -0.78
TRAF1-203ENST00000546084 PDE5AO76074 875 aa10.15□□□□□ -0.78
TRAF1-203ENST00000546084 FARP2O94887 1054 aaPredicted RBP10.15□□□□□ -0.78
TRAF1-203ENST00000546084 ASMTLO95671 621 aa10.15□□□□□ -0.78
TRAF1-203ENST00000546084 HSPA4LO95757 839 aa10.15□□□□□ -0.78
TRAF1-203ENST00000546084 ALADP13716 330 aa10.15□□□□□ -0.78
TRAF1-203ENST00000546084 IVDP26440 423 aa10.15□□□□□ -0.78
TRAF1-203ENST00000546084 PTPN4P29074 926 aa10.15□□□□□ -0.78
TRAF1-203ENST00000546084 RBP5P82980 135 aa10.15□□□□□ -0.78
TRAF1-203ENST00000546084 GBE1Q04446 702 aa10.15□□□□□ -0.78
TRAF1-203ENST00000546084 MON1BQ7L1V2 547 aa10.15□□□□□ -0.78
TRAF1-203ENST00000546084 TNS4Q8IZW8 715 aa10.15□□□□□ -0.78
TRAF1-203ENST00000546084 SLC2A14Q8TDB8 520 aa10.15□□□□□ -0.78
TRAF1-203ENST00000546084 ZNF669Q96BR6 464 aaPredicted RBP10.15□□□□□ -0.78
TRAF1-203ENST00000546084 DCLRE1BQ9H816 532 aa10.15□□□□□ -0.78
TRAF1-203ENST00000546084 TXNRD2Q9NNW7 524 aa10.15□□□□□ -0.78
TRAF1-203ENST00000546084 PAPOLBQ9NRJ5 636 aaKnown RBP10.15□□□□□ -0.78
TRAF1-203ENST00000546084 ARHGAP28Q9P2N2 729 aa10.15□□□□□ -0.78
TRAF1-203ENST00000546084 SLC4A7Q9Y6M7 1214 aa10.15□□□□□ -0.78
TRAF1-203ENST00000546084 PHLPP1O60346 1717 aa10.15□□□□□ -0.78
TRAF1-203ENST00000546084 WDR27A2RRH5 827 aa10.15□□□□□ -0.79
TRAF1-203ENST00000546084 SOWAHBA6NEL2 793 aa10.15□□□□□ -0.79
TRAF1-203ENST00000546084 CASTOR2A6NHX0 329 aa10.15□□□□□ -0.79
TRAF1-203ENST00000546084 SPDYE5A6NIY4 337 aa10.15□□□□□ -0.79
TRAF1-203ENST00000546084 AIM2O14862 343 aa10.15□□□□□ -0.79
TRAF1-203ENST00000546084 EDF1O60869 148 aaKnown RBP10.15□□□□□ -0.79
TRAF1-203ENST00000546084 UNGP13051 313 aaPredicted RBP10.15□□□□□ -0.79
TRAF1-203ENST00000546084 NCAM1P13591 858 aa10.15□□□□□ -0.79
TRAF1-203ENST00000546084 CCNB1P14635 433 aa10.15□□□□□ -0.79
TRAF1-203ENST00000546084 MMP8P22894 467 aa10.15□□□□□ -0.79
TRAF1-203ENST00000546084 SKIV2L2P42285 1042 aaKnown RBP10.15□□□□□ -0.79
TRAF1-203ENST00000546084 MAP3K7CLP57077 242 aa10.15□□□□□ -0.79
TRAF1-203ENST00000546084 KHDC1Q4VXA5 237 aaKnown RBP10.15□□□□□ -0.79
TRAF1-203ENST00000546084 RFWD3Q6PCD5 774 aa10.15□□□□□ -0.79
TRAF1-203ENST00000546084 RHBDF2Q6PJF5 856 aa10.15□□□□□ -0.79
TRAF1-203ENST00000546084 FAM183BPQ6ZVS7 135 aa10.15□□□□□ -0.79
TRAF1-203ENST00000546084 PRPF39Q86UA1 669 aaKnown RBP10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms