RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 TEX264Q9Y6I9 313 aa15.64■□□□□ 0.09
USP28-214ENST00000545540 ARID2Q68CP9 1835 aa15.64■□□□□ 0.09
USP28-214ENST00000545540 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.64■□□□□ 0.09
USP28-214ENST00000545540 CCDC78A2IDD5 438 aa15.64■□□□□ 0.09
USP28-214ENST00000545540 B2RBV5 119 aa15.64■□□□□ 0.09
USP28-214ENST00000545540 ACKR2O00590 384 aa15.64■□□□□ 0.09
USP28-214ENST00000545540 CAPN9O14815 690 aa15.64■□□□□ 0.09
USP28-214ENST00000545540 GSC2O15499 205 aa15.64■□□□□ 0.09
USP28-214ENST00000545540 TXNP10599 105 aaKnown RBP15.64■□□□□ 0.09
USP28-214ENST00000545540 UBAP2LQ14157 1087 aaKnown RBP15.64■□□□□ 0.09
USP28-214ENST00000545540 SLC10A6Q3KNW5 377 aa15.64■□□□□ 0.09
USP28-214ENST00000545540 C4orf50Q6ZRC1 276 aa15.64■□□□□ 0.09
USP28-214ENST00000545540 CAND1Q86VP6 1230 aaKnown RBP15.64■□□□□ 0.09
USP28-214ENST00000545540 SESTD1Q86VW0 696 aa15.64■□□□□ 0.09
USP28-214ENST00000545540 POU5F2Q8N7G0 328 aa15.64■□□□□ 0.09
USP28-214ENST00000545540 NIPA2Q8N8Q9 360 aa15.64■□□□□ 0.09
USP28-214ENST00000545540 HIPK4Q8NE63 616 aa15.64■□□□□ 0.09
USP28-214ENST00000545540 DDX50Q9BQ39 737 aaKnown RBP15.64■□□□□ 0.09
USP28-214ENST00000545540 ETNK2Q9NVF9 386 aa15.64■□□□□ 0.09
USP28-214ENST00000545540 TRIP11Q15643 1979 aa15.63■□□□□ 0.09
USP28-214ENST00000545540 C19orf81C9J6K1 198 aa15.63■□□□□ 0.09
USP28-214ENST00000545540 ADM5C9JUS6 153 aa15.63■□□□□ 0.09
USP28-214ENST00000545540 SORBS2O94875 1100 aaKnown RBP15.63■□□□□ 0.09
USP28-214ENST00000545540 GPD1P21695 349 aa15.63■□□□□ 0.09
USP28-214ENST00000545540 RASA2Q15283 850 aa15.63■□□□□ 0.09
USP28-214ENST00000545540 GOLGA7BQ2TAP0 167 aa15.63■□□□□ 0.09
USP28-214ENST00000545540 CCDC14Q49A88 953 aa15.63■□□□□ 0.09
USP28-214ENST00000545540 CAPRIN2Q6IMN6 1127 aaKnown RBP15.63■□□□□ 0.09
USP28-214ENST00000545540 NDUFAF2Q8N183 169 aa15.63■□□□□ 0.09
USP28-214ENST00000545540 SLC44A1Q8WWI5 657 aa15.63■□□□□ 0.09
USP28-214ENST00000545540 IQANK1A0A1B0GTG1 560 aa15.63■□□□□ 0.09
USP28-214ENST00000545540 SPDYE5A6NIY4 337 aa15.63■□□□□ 0.09
USP28-214ENST00000545540 MED7O43513 233 aa15.63■□□□□ 0.09
USP28-214ENST00000545540 CILPO75339 1184 aa15.63■□□□□ 0.09
USP28-214ENST00000545540 SKIV2L2P42285 1042 aaKnown RBP15.63■□□□□ 0.09
USP28-214ENST00000545540 ETV4P43268 484 aa15.63■□□□□ 0.09
USP28-214ENST00000545540 OAZ1P54368 228 aa15.63■□□□□ 0.09
USP28-214ENST00000545540 AQP5P55064 265 aa15.63■□□□□ 0.09
USP28-214ENST00000545540 SESN2P58004 480 aaPredicted RBP15.63■□□□□ 0.09
USP28-214ENST00000545540 MRPS5P82675 430 aaKnown RBP15.63■□□□□ 0.09
USP28-214ENST00000545540 SLC10A2Q12908 348 aaPredicted RBP15.63■□□□□ 0.09
USP28-214ENST00000545540 ANO7Q6IWH7 933 aa15.63■□□□□ 0.09
USP28-214ENST00000545540 LBX2Q6XYB7 198 aa15.63■□□□□ 0.09
USP28-214ENST00000545540 TP53INP2Q8IXH6 220 aa15.63■□□□□ 0.09
USP28-214ENST00000545540 PQLC3Q8N755 202 aa15.63■□□□□ 0.09
USP28-214ENST00000545540 PDCD7Q8N8D1 485 aaKnown RBP15.63■□□□□ 0.09
USP28-214ENST00000545540 TTC13Q8NBP0 860 aa15.63■□□□□ 0.09
USP28-214ENST00000545540 ASNSD1Q9NWL6 643 aa15.63■□□□□ 0.09
USP28-214ENST00000545540 SEPT10Q9P0V9 454 aa15.63■□□□□ 0.09
USP28-214ENST00000545540 DPPA5A6NC42 116 aa15.62■□□□□ 0.09
USP28-214ENST00000545540 LCP1P13796 627 aa15.62■□□□□ 0.09
USP28-214ENST00000545540 INSRRP14616 1297 aa15.62■□□□□ 0.09
USP28-214ENST00000545540 KCNA4P22459 653 aa15.62■□□□□ 0.09
USP28-214ENST00000545540 ADORA2BP29275 332 aa15.62■□□□□ 0.09
USP28-214ENST00000545540 MXRA7P84157 204 aa15.62■□□□□ 0.09
USP28-214ENST00000545540 MBTD1Q05BQ5 628 aa15.62■□□□□ 0.09
USP28-214ENST00000545540 PARP6Q2NL67 630 aa15.62■□□□□ 0.09
USP28-214ENST00000545540 CEP128Q6ZU80 1094 aa15.62■□□□□ 0.09
USP28-214ENST00000545540 NSL1Q96IY1 281 aa15.62■□□□□ 0.09
USP28-214ENST00000545540 PPP1R36Q96LQ0 422 aa15.62■□□□□ 0.09
USP28-214ENST00000545540 RNF157Q96PX1 679 aa15.62■□□□□ 0.09
USP28-214ENST00000545540 MRPL45Q9BRJ2 306 aaKnown RBP15.62■□□□□ 0.09
USP28-214ENST00000545540 DPEP3Q9H4B8 488 aa15.62■□□□□ 0.09
USP28-214ENST00000545540 PTPRHQ9HD43 1115 aa15.62■□□□□ 0.09
USP28-214ENST00000545540 PACSIN3Q9UKS6 424 aa15.62■□□□□ 0.09
USP28-214ENST00000545540 LAMA2P24043 3122 aaKnown RBP15.62■□□□□ 0.09
USP28-214ENST00000545540 BPTFQ12830 3046 aa15.62■□□□□ 0.09
USP28-214ENST00000545540 MCM3APO60318 1980 aa15.62■□□□□ 0.09
USP28-214ENST00000545540 TBX10O75333 385 aa15.62■□□□□ 0.09
USP28-214ENST00000545540 USP2O75604 605 aaPredicted RBP15.62■□□□□ 0.09
USP28-214ENST00000545540 USP1O94782 785 aa15.62■□□□□ 0.09
USP28-214ENST00000545540 ICAM3P32942 547 aa15.62■□□□□ 0.09
USP28-214ENST00000545540 CDH5P33151 784 aaPredicted RBP15.62■□□□□ 0.09
USP28-214ENST00000545540 RASSF2P50749 326 aa15.62■□□□□ 0.09
USP28-214ENST00000545540 TAP1Q03518 808 aa15.62■□□□□ 0.09
USP28-214ENST00000545540 MXD4Q14582 209 aaPredicted RBP15.62■□□□□ 0.09
USP28-214ENST00000545540 PRKD1Q15139 912 aaPredicted RBP15.62■□□□□ 0.09
USP28-214ENST00000545540 DENND5BQ6ZUT9 1274 aa15.62■□□□□ 0.09
USP28-214ENST00000545540 RSPH3Q86UC2 560 aa15.62■□□□□ 0.09
USP28-214ENST00000545540 OXNAD1Q96HP4 312 aaPredicted RBP15.62■□□□□ 0.09
USP28-214ENST00000545540 APOPT1Q96IL0 206 aa15.62■□□□□ 0.09
USP28-214ENST00000545540 BTBD10Q9BSF8 475 aa15.62■□□□□ 0.09
USP28-214ENST00000545540 DHRS4Q9BTZ2 278 aa15.62■□□□□ 0.09
USP28-214ENST00000545540 SNRNP25Q9BV90 132 aaKnown RBP15.62■□□□□ 0.09
USP28-214ENST00000545540 RSAD1Q9HA92 442 aa15.62■□□□□ 0.09
USP28-214ENST00000545540 IFT122Q9HBG6 1241 aa15.62■□□□□ 0.09
USP28-214ENST00000545540 TTLL3Q9Y4R7 772 aa15.62■□□□□ 0.09
USP28-214ENST00000545540 MGAMO43451 1857 aa15.62■□□□□ 0.09
USP28-214ENST00000545540 EME2A4GXA9 379 aaPredicted RBP15.62■□□□□ 0.09
USP28-214ENST00000545540 BAG2O95816 211 aa15.62■□□□□ 0.09
USP28-214ENST00000545540 ARF4P18085 180 aaPredicted RBP15.62■□□□□ 0.09
USP28-214ENST00000545540 KCNJ11Q14654 390 aa15.62■□□□□ 0.09
USP28-214ENST00000545540 NOMO1Q15155 1222 aa15.62■□□□□ 0.09
USP28-214ENST00000545540 TSHZ1Q6ZSZ6 1077 aa15.62■□□□□ 0.09
USP28-214ENST00000545540 DNERQ8NFT8 737 aa15.62■□□□□ 0.09
USP28-214ENST00000545540 LGMNQ99538 433 aa15.62■□□□□ 0.09
USP28-214ENST00000545540 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.62■□□□□ 0.09
USP28-214ENST00000545540 NMRK1Q9NWW6 199 aa15.62■□□□□ 0.09
USP28-214ENST00000545540 ZNF112Q9UJU3 913 aa15.62■□□□□ 0.09
USP28-214ENST00000545540 DCAF8L1A6NGE4 600 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms