RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 YARSP54577 528 aaKnown RBP7.36□□□□□ -1.23
LDHA-223ENST00000545215 ID3Q02535 119 aa7.36□□□□□ -1.23
LDHA-223ENST00000545215 TRAF1Q13077 416 aa7.36□□□□□ -1.23
LDHA-223ENST00000545215 BYSLQ13895 437 aaKnown RBP7.36□□□□□ -1.23
LDHA-223ENST00000545215 APOA5Q6Q788 366 aa7.36□□□□□ -1.23
LDHA-223ENST00000545215 MRPL41Q8IXM3 137 aaKnown RBP7.36□□□□□ -1.23
LDHA-223ENST00000545215 SAMD3Q8N6K7 520 aa7.36□□□□□ -1.23
LDHA-223ENST00000545215 FAM13CQ8NE31 585 aa7.36□□□□□ -1.23
LDHA-223ENST00000545215 EDARADDQ8WWZ3 215 aa7.36□□□□□ -1.23
LDHA-223ENST00000545215 SNX21Q969T3 373 aa7.36□□□□□ -1.23
LDHA-223ENST00000545215 CHFRQ96EP1 664 aa7.36□□□□□ -1.23
LDHA-223ENST00000545215 LRRC3BQ96PB8 259 aa7.36□□□□□ -1.23
LDHA-223ENST00000545215 SLC25A18Q9H1K4 315 aa7.36□□□□□ -1.23
LDHA-223ENST00000545215 FAM124BQ9H5Z6 455 aaPredicted RBP7.36□□□□□ -1.23
LDHA-223ENST00000545215 DDX56Q9NY93 547 aaKnown RBP7.36□□□□□ -1.23
LDHA-223ENST00000545215 RTEL1Q9NZ71 1219 aa7.36□□□□□ -1.23
LDHA-223ENST00000545215 PCDHGA1Q9Y5H4 931 aa7.36□□□□□ -1.23
LDHA-223ENST00000545215 NBASA2RRP1 2371 aa7.36□□□□□ -1.23
LDHA-223ENST00000545215 MYLKQ15746 1914 aa7.35□□□□□ -1.23
LDHA-223ENST00000545215 A0A087X0B3 334 aa7.35□□□□□ -1.23
LDHA-223ENST00000545215 KLF18A0A0U1RQI7 1052 aa7.35□□□□□ -1.23
LDHA-223ENST00000545215 RGS13O14921 159 aa7.35□□□□□ -1.23
LDHA-223ENST00000545215 ZBTB5O15062 677 aa7.35□□□□□ -1.23
LDHA-223ENST00000545215 TMPRSS2O15393 492 aa7.35□□□□□ -1.23
LDHA-223ENST00000545215 ADAM12O43184 909 aa7.35□□□□□ -1.23
LDHA-223ENST00000545215 MOSPD3O75425 235 aa7.35□□□□□ -1.23
LDHA-223ENST00000545215 FAM155BO75949 473 aa7.35□□□□□ -1.23
LDHA-223ENST00000545215 CDKL5O76039 1030 aa7.35□□□□□ -1.23
LDHA-223ENST00000545215 HOXA13P31271 388 aaPredicted RBP7.35□□□□□ -1.23
LDHA-223ENST00000545215 CD68P34810 354 aaPredicted RBP7.35□□□□□ -1.23
LDHA-223ENST00000545215 CD97P48960 835 aa7.35□□□□□ -1.23
LDHA-223ENST00000545215 GALK1P51570 392 aa7.35□□□□□ -1.23
LDHA-223ENST00000545215 ZNF143P52747 638 aaPredicted RBP7.35□□□□□ -1.23
LDHA-223ENST00000545215 PMS1P54277 932 aaKnown RBP7.35□□□□□ -1.23
LDHA-223ENST00000545215 TOB2Q14106 344 aaPredicted RBP7.35□□□□□ -1.23
LDHA-223ENST00000545215 BECN1Q14457 450 aa7.35□□□□□ -1.23
LDHA-223ENST00000545215 BBS9Q3SYG4 887 aa7.35□□□□□ -1.23
LDHA-223ENST00000545215 SLC6A19Q695T7 634 aa7.35□□□□□ -1.23
LDHA-223ENST00000545215 FUT10Q6P4F1 479 aa7.35□□□□□ -1.23
LDHA-223ENST00000545215 PLPPR4Q7Z2D5 763 aa7.35□□□□□ -1.23
LDHA-223ENST00000545215 DEFB119Q8N690 84 aa7.35□□□□□ -1.23
LDHA-223ENST00000545215 FANCBQ8NB91 859 aa7.35□□□□□ -1.23
LDHA-223ENST00000545215 LNX1Q8TBB1 728 aaPredicted RBP7.35□□□□□ -1.23
LDHA-223ENST00000545215 MTMR8Q96EF0 704 aa7.35□□□□□ -1.23
LDHA-223ENST00000545215 BTBD6Q96KE9 485 aa7.35□□□□□ -1.23
LDHA-223ENST00000545215 GPR88Q9GZN0 384 aa7.35□□□□□ -1.23
LDHA-223ENST00000545215 AZI2Q9H6S1 392 aa7.35□□□□□ -1.23
LDHA-223ENST00000545215 GAREM1Q9H706 876 aa7.35□□□□□ -1.23
LDHA-223ENST00000545215 CRIM1Q9NZV1 1036 aa7.35□□□□□ -1.23
LDHA-223ENST00000545215 SUSD2Q9UGT4 822 aa7.35□□□□□ -1.23
LDHA-223ENST00000545215 MAD2L2Q9UI95 211 aa7.35□□□□□ -1.23
LDHA-223ENST00000545215 CEP192Q8TEP8 1941 aa7.35□□□□□ -1.23
LDHA-223ENST00000545215 PLXND1Q9Y4D7 1925 aa7.35□□□□□ -1.23
LDHA-223ENST00000545215 GOLGA8BA8MQT2 603 aa7.34□□□□□ -1.23
LDHA-223ENST00000545215 GCOM1H8Y6P7 765 aaPredicted RBP7.34□□□□□ -1.23
LDHA-223ENST00000545215 CPLX1O14810 134 aa7.34□□□□□ -1.23
LDHA-223ENST00000545215 PFKFB2O60825 505 aa7.34□□□□□ -1.23
LDHA-223ENST00000545215 PPP1R11O60927 126 aaPredicted RBP7.34□□□□□ -1.23
LDHA-223ENST00000545215 CER1O95813 267 aa7.34□□□□□ -1.23
LDHA-223ENST00000545215 CLDN1O95832 211 aa7.34□□□□□ -1.23
LDHA-223ENST00000545215 POMCP01189 267 aa7.34□□□□□ -1.23
LDHA-223ENST00000545215 C1SP09871 688 aa7.34□□□□□ -1.23
LDHA-223ENST00000545215 POLR2MP0CAP2 368 aa7.34□□□□□ -1.23
LDHA-223ENST00000545215 RNF224P0DH78 156 aa7.34□□□□□ -1.23
LDHA-223ENST00000545215 CPA1P15085 419 aa7.34□□□□□ -1.23
LDHA-223ENST00000545215 PDIA3P30101 505 aaKnown RBP7.34□□□□□ -1.23
LDHA-223ENST00000545215 NLRP11P59045 1033 aaKnown RBP7.34□□□□□ -1.23
LDHA-223ENST00000545215 ERVPABLB-1P60509 514 aa7.34□□□□□ -1.23
LDHA-223ENST00000545215 SPIRE1Q08AE8 756 aa7.34□□□□□ -1.23
LDHA-223ENST00000545215 TM4SF20Q53R12 229 aa7.34□□□□□ -1.23
LDHA-223ENST00000545215 DCAF6Q58WW2 860 aa7.34□□□□□ -1.23
LDHA-223ENST00000545215 RTP2Q5QGT7 225 aa7.34□□□□□ -1.23
LDHA-223ENST00000545215 EXOSC6Q5RKV6 272 aaKnown RBP7.34□□□□□ -1.23
LDHA-223ENST00000545215 FHL5Q5TD97 284 aa7.34□□□□□ -1.23
LDHA-223ENST00000545215 HES3Q5TGS1 186 aa7.34□□□□□ -1.23
LDHA-223ENST00000545215 FOXB2Q5VYV0 432 aa7.34□□□□□ -1.23
LDHA-223ENST00000545215 PDZD4Q76G19 769 aaPredicted RBP7.34□□□□□ -1.23
LDHA-223ENST00000545215 HID1Q8IV36 788 aa7.34□□□□□ -1.23
LDHA-223ENST00000545215 TEX2Q8IWB9 1127 aa7.34□□□□□ -1.23
LDHA-223ENST00000545215 HSCBQ8IWL3 235 aa7.34□□□□□ -1.23
LDHA-223ENST00000545215 DMRTC2Q8IXT2 367 aaPredicted RBP7.34□□□□□ -1.23
LDHA-223ENST00000545215 GALNT6Q8NCL4 622 aa7.34□□□□□ -1.23
LDHA-223ENST00000545215 ENGASEQ8NFI3 743 aa7.34□□□□□ -1.23
LDHA-223ENST00000545215 ZNF564Q8TBZ8 553 aaPredicted RBP7.34□□□□□ -1.23
LDHA-223ENST00000545215 PIBF1Q8WXW3 757 aa7.34□□□□□ -1.23
LDHA-223ENST00000545215 EZH1Q92800 747 aaPredicted RBP7.34□□□□□ -1.23
LDHA-223ENST00000545215 EXTL1Q92935 676 aa7.34□□□□□ -1.23
LDHA-223ENST00000545215 NINJ1Q92982 152 aa7.34□□□□□ -1.23
LDHA-223ENST00000545215 KISS1RQ969F8 398 aaPredicted RBP7.34□□□□□ -1.23
LDHA-223ENST00000545215 PGBD4Q96DM1 585 aa7.34□□□□□ -1.23
LDHA-223ENST00000545215 DHRS1Q96LJ7 313 aa7.34□□□□□ -1.23
LDHA-223ENST00000545215 PIGSQ96S52 555 aa7.34□□□□□ -1.23
LDHA-223ENST00000545215 COLEC11Q9BWP8 271 aa7.34□□□□□ -1.23
LDHA-223ENST00000545215 FBRSQ9HAH7 460 aa7.34□□□□□ -1.23
LDHA-223ENST00000545215 FAM105AQ9NUU6 356 aa7.34□□□□□ -1.23
LDHA-223ENST00000545215 DONSONQ9NYP3 566 aa7.34□□□□□ -1.23
LDHA-223ENST00000545215 SUCOQ9UBS9 1254 aaKnown RBP7.34□□□□□ -1.23
LDHA-223ENST00000545215 KIF3AQ9Y496 699 aa7.34□□□□□ -1.23
LDHA-223ENST00000545215 FN1P02751 2386 aaKnown RBP7.34□□□□□ -1.23
LDHA-223ENST00000545215 ARHGEF37A1IGU5 675 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms